co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G35800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019447: D-cysteine catabolic process	0.00E+00
2	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
3	GO:0007638: mechanosensory behavior	0.00E+00
4	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
5	GO:0097164: ammonium ion metabolic process	0.00E+00
6	GO:0010480: microsporocyte differentiation	0.00E+00
7	GO:0031129: inductive cell-cell signaling	0.00E+00
8	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
9	GO:0007172: signal complex assembly	0.00E+00
10	GO:0006399: tRNA metabolic process	0.00E+00
11	GO:0015843: methylammonium transport	0.00E+00
12	GO:0031222: arabinan catabolic process	0.00E+00
13	GO:0070979: protein K11-linked ubiquitination	0.00E+00
14	GO:0043488: regulation of mRNA stability	0.00E+00
15	GO:0061157: mRNA destabilization	0.00E+00
16	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
17	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
18	GO:0018131: oxazole or thiazole biosynthetic process	0.00E+00
19	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
20	GO:0009157: deoxyribonucleoside monophosphate biosynthetic process	0.00E+00
21	GO:0010068: protoderm histogenesis	0.00E+00
22	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.63E-07
23	GO:0009658: chloroplast organization	6.95E-06
24	GO:0006468: protein phosphorylation	2.61E-05
25	GO:0031022: nuclear migration along microfilament	5.38E-05
26	GO:0000373: Group II intron splicing	8.55E-05
27	GO:0009734: auxin-activated signaling pathway	1.92E-04
28	GO:0044205: 'de novo' UMP biosynthetic process	1.93E-04
29	GO:0016123: xanthophyll biosynthetic process	2.93E-04
30	GO:0009934: regulation of meristem structural organization	3.05E-04
31	GO:0009903: chloroplast avoidance movement	5.43E-04
32	GO:1902265: abscisic acid homeostasis	6.13E-04
33	GO:0043266: regulation of potassium ion transport	6.13E-04
34	GO:2000021: regulation of ion homeostasis	6.13E-04
35	GO:0006264: mitochondrial DNA replication	6.13E-04
36	GO:0043609: regulation of carbon utilization	6.13E-04
37	GO:0033259: plastid DNA replication	6.13E-04
38	GO:0006436: tryptophanyl-tRNA aminoacylation	6.13E-04
39	GO:0006177: GMP biosynthetic process	6.13E-04
40	GO:0006419: alanyl-tRNA aminoacylation	6.13E-04
41	GO:0051171: regulation of nitrogen compound metabolic process	6.13E-04
42	GO:0010482: regulation of epidermal cell division	6.13E-04
43	GO:0048437: floral organ development	6.95E-04
44	GO:0006400: tRNA modification	6.95E-04
45	GO:0009787: regulation of abscisic acid-activated signaling pathway	8.64E-04
46	GO:0042255: ribosome assembly	8.64E-04
47	GO:0046620: regulation of organ growth	8.64E-04
48	GO:0006002: fructose 6-phosphate metabolic process	1.05E-03
49	GO:0010434: bract formation	1.32E-03
50	GO:2000039: regulation of trichome morphogenesis	1.32E-03
51	GO:0042325: regulation of phosphorylation	1.32E-03
52	GO:0042814: monopolar cell growth	1.32E-03
53	GO:0009220: pyrimidine ribonucleotide biosynthetic process	1.32E-03
54	GO:0048439: flower morphogenesis	1.32E-03
55	GO:0031648: protein destabilization	1.32E-03
56	GO:0071258: cellular response to gravity	1.32E-03
57	GO:0006529: asparagine biosynthetic process	1.32E-03
58	GO:0010254: nectary development	1.32E-03
59	GO:0080005: photosystem stoichiometry adjustment	1.32E-03
60	GO:0070981: L-asparagine biosynthetic process	1.32E-03
61	GO:0009638: phototropism	1.48E-03
62	GO:0032502: developmental process	1.63E-03
63	GO:0007623: circadian rhythm	1.85E-03
64	GO:0048229: gametophyte development	2.01E-03
65	GO:0031145: anaphase-promoting complex-dependent catabolic process	2.17E-03
66	GO:0070475: rRNA base methylation	2.17E-03
67	GO:0045604: regulation of epidermal cell differentiation	2.17E-03
68	GO:0051604: protein maturation	2.17E-03
69	GO:0016050: vesicle organization	2.17E-03
70	GO:0009954: proximal/distal pattern formation	2.17E-03
71	GO:0051127: positive regulation of actin nucleation	2.17E-03
72	GO:0019419: sulfate reduction	2.17E-03
73	GO:0006000: fructose metabolic process	2.17E-03
74	GO:0010582: floral meristem determinacy	2.30E-03
75	GO:0010075: regulation of meristem growth	2.62E-03
76	GO:0010020: chloroplast fission	2.96E-03
77	GO:0030154: cell differentiation	2.98E-03
78	GO:0010255: glucose mediated signaling pathway	3.15E-03
79	GO:0015696: ammonium transport	3.15E-03
80	GO:0048530: fruit morphogenesis	3.15E-03
81	GO:0046739: transport of virus in multicellular host	3.15E-03
82	GO:0032981: mitochondrial respiratory chain complex I assembly	3.15E-03
83	GO:2000904: regulation of starch metabolic process	3.15E-03
84	GO:0031048: chromatin silencing by small RNA	3.15E-03
85	GO:0043572: plastid fission	3.15E-03
86	GO:2001141: regulation of RNA biosynthetic process	3.15E-03
87	GO:1902476: chloride transmembrane transport	3.15E-03
88	GO:0007231: osmosensory signaling pathway	3.15E-03
89	GO:0030071: regulation of mitotic metaphase/anaphase transition	3.15E-03
90	GO:0051639: actin filament network formation	3.15E-03
91	GO:0009800: cinnamic acid biosynthetic process	3.15E-03
92	GO:0044211: CTP salvage	3.15E-03
93	GO:0048645: animal organ formation	3.15E-03
94	GO:0019048: modulation by virus of host morphology or physiology	3.15E-03
95	GO:0000160: phosphorelay signal transduction system	3.60E-03
96	GO:0010187: negative regulation of seed germination	4.12E-03
97	GO:0005992: trehalose biosynthetic process	4.12E-03
98	GO:0019344: cysteine biosynthetic process	4.12E-03
99	GO:0009944: polarity specification of adaxial/abaxial axis	4.12E-03
100	GO:0051567: histone H3-K9 methylation	4.25E-03
101	GO:0009902: chloroplast relocation	4.25E-03
102	GO:0044206: UMP salvage	4.25E-03
103	GO:0009165: nucleotide biosynthetic process	4.25E-03
104	GO:0051764: actin crosslink formation	4.25E-03
105	GO:0015846: polyamine transport	4.25E-03
106	GO:0033500: carbohydrate homeostasis	4.25E-03
107	GO:0072488: ammonium transmembrane transport	4.25E-03
108	GO:0022622: root system development	4.25E-03
109	GO:0016998: cell wall macromolecule catabolic process	5.00E-03
110	GO:0009904: chloroplast accumulation movement	5.46E-03
111	GO:0006544: glycine metabolic process	5.46E-03
112	GO:1902183: regulation of shoot apical meristem development	5.46E-03
113	GO:0010158: abaxial cell fate specification	5.46E-03
114	GO:0048578: positive regulation of long-day photoperiodism, flowering	5.46E-03
115	GO:0032876: negative regulation of DNA endoreduplication	5.46E-03
116	GO:0016131: brassinosteroid metabolic process	5.46E-03
117	GO:2000022: regulation of jasmonic acid mediated signaling pathway	5.48E-03
118	GO:0009926: auxin polar transport	6.34E-03
119	GO:0010091: trichome branching	6.51E-03
120	GO:0006559: L-phenylalanine catabolic process	6.78E-03
121	GO:0006206: pyrimidine nucleobase metabolic process	6.78E-03
122	GO:0016458: gene silencing	6.78E-03
123	GO:0009635: response to herbicide	6.78E-03
124	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.78E-03
125	GO:0009228: thiamine biosynthetic process	6.78E-03
126	GO:0006563: L-serine metabolic process	6.78E-03
127	GO:0010405: arabinogalactan protein metabolic process	6.78E-03
128	GO:0009959: negative gravitropism	6.78E-03
129	GO:0006655: phosphatidylglycerol biosynthetic process	6.78E-03
130	GO:0006139: nucleobase-containing compound metabolic process	6.78E-03
131	GO:0042793: transcription from plastid promoter	6.78E-03
132	GO:0045962: positive regulation of development, heterochronic	6.78E-03
133	GO:0040008: regulation of growth	7.01E-03
134	GO:0048653: anther development	7.65E-03
135	GO:0009099: valine biosynthetic process	8.20E-03
136	GO:0030488: tRNA methylation	8.20E-03
137	GO:0048444: floral organ morphogenesis	8.20E-03
138	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	8.20E-03
139	GO:0009648: photoperiodism	8.20E-03
140	GO:0042372: phylloquinone biosynthetic process	8.20E-03
141	GO:0009082: branched-chain amino acid biosynthetic process	8.20E-03
142	GO:0009733: response to auxin	8.42E-03
143	GO:0009646: response to absence of light	8.88E-03
144	GO:0007166: cell surface receptor signaling pathway	9.24E-03
145	GO:0009736: cytokinin-activated signaling pathway	9.29E-03
146	GO:0010444: guard mother cell differentiation	9.71E-03
147	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	9.71E-03
148	GO:0032880: regulation of protein localization	9.71E-03
149	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	9.71E-03
150	GO:0010161: red light signaling pathway	9.71E-03
151	GO:0009610: response to symbiotic fungus	9.71E-03
152	GO:0006955: immune response	9.71E-03
153	GO:0006821: chloride transport	9.71E-03
154	GO:0010050: vegetative phase change	9.71E-03
155	GO:0016310: phosphorylation	1.01E-02
156	GO:0009850: auxin metabolic process	1.13E-02
157	GO:0009704: de-etiolation	1.13E-02
158	GO:0032875: regulation of DNA endoreduplication	1.13E-02
159	GO:0030162: regulation of proteolysis	1.13E-02
160	GO:0006353: DNA-templated transcription, termination	1.13E-02
161	GO:0070413: trehalose metabolism in response to stress	1.13E-02
162	GO:0006402: mRNA catabolic process	1.13E-02
163	GO:0001522: pseudouridine synthesis	1.13E-02
164	GO:0009828: plant-type cell wall loosening	1.24E-02
165	GO:0009097: isoleucine biosynthetic process	1.30E-02
166	GO:0010100: negative regulation of photomorphogenesis	1.30E-02
167	GO:0010497: plasmodesmata-mediated intercellular transport	1.30E-02
168	GO:0006526: arginine biosynthetic process	1.30E-02
169	GO:0032544: plastid translation	1.30E-02
170	GO:0007389: pattern specification process	1.30E-02
171	GO:0010099: regulation of photomorphogenesis	1.30E-02
172	GO:0071482: cellular response to light stimulus	1.30E-02
173	GO:0009827: plant-type cell wall modification	1.30E-02
174	GO:0009740: gibberellic acid mediated signaling pathway	1.35E-02
175	GO:0051607: defense response to virus	1.40E-02
176	GO:0006783: heme biosynthetic process	1.48E-02
177	GO:0000902: cell morphogenesis	1.48E-02
178	GO:0051865: protein autoubiquitination	1.48E-02
179	GO:0009051: pentose-phosphate shunt, oxidative branch	1.48E-02
180	GO:2000024: regulation of leaf development	1.48E-02
181	GO:0010029: regulation of seed germination	1.57E-02
182	GO:0010380: regulation of chlorophyll biosynthetic process	1.67E-02
183	GO:0031425: chloroplast RNA processing	1.67E-02
184	GO:0042761: very long-chain fatty acid biosynthetic process	1.67E-02
185	GO:0035999: tetrahydrofolate interconversion	1.67E-02
186	GO:0010411: xyloglucan metabolic process	1.75E-02
187	GO:0006535: cysteine biosynthetic process from serine	1.86E-02
188	GO:0000103: sulfate assimilation	1.86E-02
189	GO:0030422: production of siRNA involved in RNA interference	1.86E-02
190	GO:0045036: protein targeting to chloroplast	1.86E-02
191	GO:0006949: syncytium formation	1.86E-02
192	GO:0009299: mRNA transcription	1.86E-02
193	GO:0080167: response to karrikin	2.02E-02
194	GO:0009773: photosynthetic electron transport in photosystem I	2.06E-02
195	GO:1903507: negative regulation of nucleic acid-templated transcription	2.06E-02
196	GO:0006352: DNA-templated transcription, initiation	2.06E-02
197	GO:0006415: translational termination	2.06E-02
198	GO:0006816: calcium ion transport	2.06E-02
199	GO:0046777: protein autophosphorylation	2.23E-02
200	GO:0016024: CDP-diacylglycerol biosynthetic process	2.27E-02
201	GO:0045037: protein import into chloroplast stroma	2.27E-02
202	GO:0009637: response to blue light	2.47E-02
203	GO:0010628: positive regulation of gene expression	2.49E-02
204	GO:0009785: blue light signaling pathway	2.49E-02
205	GO:0006006: glucose metabolic process	2.49E-02
206	GO:0030036: actin cytoskeleton organization	2.49E-02
207	GO:0050826: response to freezing	2.49E-02
208	GO:0009725: response to hormone	2.49E-02
209	GO:0009767: photosynthetic electron transport chain	2.49E-02
210	GO:0030048: actin filament-based movement	2.49E-02
211	GO:2000012: regulation of auxin polar transport	2.49E-02
212	GO:0006541: glutamine metabolic process	2.71E-02
213	GO:0090351: seedling development	2.94E-02
214	GO:0010030: positive regulation of seed germination	2.94E-02
215	GO:0070588: calcium ion transmembrane transport	2.94E-02
216	GO:0006071: glycerol metabolic process	3.18E-02
217	GO:0010025: wax biosynthetic process	3.18E-02
218	GO:0042546: cell wall biogenesis	3.31E-02
219	GO:0051017: actin filament bundle assembly	3.42E-02
220	GO:0007010: cytoskeleton organization	3.42E-02
221	GO:0009116: nucleoside metabolic process	3.42E-02
222	GO:0008643: carbohydrate transport	3.44E-02
223	GO:0009965: leaf morphogenesis	3.58E-02
224	GO:0008380: RNA splicing	3.63E-02
225	GO:0010468: regulation of gene expression	3.63E-02
226	GO:0006825: copper ion transport	3.67E-02
227	GO:0006418: tRNA aminoacylation for protein translation	3.67E-02
228	GO:0006306: DNA methylation	3.93E-02
229	GO:0009664: plant-type cell wall organization	3.99E-02
230	GO:0042538: hyperosmotic salinity response	3.99E-02
231	GO:0071555: cell wall organization	4.10E-02
232	GO:0006730: one-carbon metabolic process	4.19E-02
233	GO:0080092: regulation of pollen tube growth	4.19E-02
234	GO:0009693: ethylene biosynthetic process	4.46E-02
235	GO:0009686: gibberellin biosynthetic process	4.46E-02
236	GO:0010227: floral organ abscission	4.46E-02
237	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.46E-02
238	GO:0010082: regulation of root meristem growth	4.46E-02
239	GO:0006417: regulation of translation	4.73E-02
240	GO:0009826: unidimensional cell growth	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
2	GO:0004056: argininosuccinate lyase activity	0.00E+00
3	GO:0052907: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity	0.00E+00
4	GO:0019136: deoxynucleoside kinase activity	0.00E+00
5	GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity	0.00E+00
6	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
7	GO:0004588: orotate phosphoribosyltransferase activity	0.00E+00
8	GO:0004590: orotidine-5'-phosphate decarboxylase activity	0.00E+00
9	GO:0019808: polyamine binding	0.00E+00
10	GO:0019148: D-cysteine desulfhydrase activity	0.00E+00
11	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
12	GO:0043621: protein self-association	2.99E-05
13	GO:0004674: protein serine/threonine kinase activity	4.27E-05
14	GO:0016301: kinase activity	9.62E-05
15	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.76E-04
16	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.93E-04
17	GO:0033612: receptor serine/threonine kinase binding	6.09E-04
18	GO:0003984: acetolactate synthase activity	6.13E-04
19	GO:0004813: alanine-tRNA ligase activity	6.13E-04
20	GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity	6.13E-04
21	GO:0004008: copper-exporting ATPase activity	6.13E-04
22	GO:0004071: aspartate-ammonia ligase activity	6.13E-04
23	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	6.13E-04
24	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	6.13E-04
25	GO:0004830: tryptophan-tRNA ligase activity	6.13E-04
26	GO:0010313: phytochrome binding	6.13E-04
27	GO:0050139: nicotinate-N-glucosyltransferase activity	6.13E-04
28	GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	6.13E-04
29	GO:0042834: peptidoglycan binding	6.13E-04
30	GO:0003727: single-stranded RNA binding	8.52E-04
31	GO:0004672: protein kinase activity	9.77E-04
32	GO:0005524: ATP binding	1.31E-03
33	GO:0050017: L-3-cyanoalanine synthase activity	1.32E-03
34	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	1.32E-03
35	GO:0010291: carotene beta-ring hydroxylase activity	1.32E-03
36	GO:0043425: bHLH transcription factor binding	1.32E-03
37	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	1.32E-03
38	GO:0003938: IMP dehydrogenase activity	1.32E-03
39	GO:0009973: adenylyl-sulfate reductase activity	1.32E-03
40	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	1.32E-03
41	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.63E-03
42	GO:0004805: trehalose-phosphatase activity	1.73E-03
43	GO:0000156: phosphorelay response regulator activity	1.77E-03
44	GO:0045548: phenylalanine ammonia-lyase activity	2.17E-03
45	GO:0070330: aromatase activity	2.17E-03
46	GO:0009982: pseudouridine synthase activity	2.62E-03
47	GO:0035197: siRNA binding	3.15E-03
48	GO:0005253: anion channel activity	4.25E-03
49	GO:0046556: alpha-L-arabinofuranosidase activity	4.25E-03
50	GO:0001053: plastid sigma factor activity	4.25E-03
51	GO:0004845: uracil phosphoribosyltransferase activity	4.25E-03
52	GO:0004737: pyruvate decarboxylase activity	4.25E-03
53	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.25E-03
54	GO:0008409: 5'-3' exonuclease activity	4.25E-03
55	GO:0016987: sigma factor activity	4.25E-03
56	GO:0004252: serine-type endopeptidase activity	5.40E-03
57	GO:0018685: alkane 1-monooxygenase activity	5.46E-03
58	GO:0004372: glycine hydroxymethyltransferase activity	5.46E-03
59	GO:0008519: ammonium transmembrane transporter activity	6.78E-03
60	GO:0005247: voltage-gated chloride channel activity	6.78E-03
61	GO:0030976: thiamine pyrophosphate binding	6.78E-03
62	GO:2001070: starch binding	6.78E-03
63	GO:0004605: phosphatidate cytidylyltransferase activity	6.78E-03
64	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.78E-03
65	GO:0016208: AMP binding	6.78E-03
66	GO:0003730: mRNA 3'-UTR binding	8.20E-03
67	GO:0004124: cysteine synthase activity	8.20E-03
68	GO:0008195: phosphatidate phosphatase activity	8.20E-03
69	GO:0004849: uridine kinase activity	8.20E-03
70	GO:0008536: Ran GTPase binding	8.25E-03
71	GO:0042803: protein homodimerization activity	8.70E-03
72	GO:0003872: 6-phosphofructokinase activity	9.71E-03
73	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.02E-02
74	GO:0003777: microtubule motor activity	1.06E-02
75	GO:0042802: identical protein binding	1.09E-02
76	GO:0051015: actin filament binding	1.17E-02
77	GO:0008173: RNA methyltransferase activity	1.30E-02
78	GO:0005375: copper ion transmembrane transporter activity	1.30E-02
79	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	1.30E-02
80	GO:0016597: amino acid binding	1.40E-02
81	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.48E-02
82	GO:0003747: translation release factor activity	1.48E-02
83	GO:0009672: auxin:proton symporter activity	1.67E-02
84	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.75E-02
85	GO:0005515: protein binding	1.80E-02
86	GO:0004713: protein tyrosine kinase activity	1.86E-02
87	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.25E-02
88	GO:0000049: tRNA binding	2.27E-02
89	GO:0004521: endoribonuclease activity	2.27E-02
90	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.27E-02
91	GO:0010329: auxin efflux transmembrane transporter activity	2.49E-02
92	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.49E-02
93	GO:0004089: carbonate dehydratase activity	2.49E-02
94	GO:0005262: calcium channel activity	2.49E-02
95	GO:0019888: protein phosphatase regulator activity	2.49E-02
96	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.71E-02
97	GO:0008083: growth factor activity	2.71E-02
98	GO:0003887: DNA-directed DNA polymerase activity	3.18E-02
99	GO:0003714: transcription corepressor activity	3.42E-02
100	GO:0005345: purine nucleobase transmembrane transporter activity	3.67E-02
101	GO:0015079: potassium ion transmembrane transporter activity	3.67E-02
102	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.93E-02
103	GO:0003690: double-stranded DNA binding	4.43E-02
104	GO:0022891: substrate-specific transmembrane transporter activity	4.46E-02
105	GO:0008514: organic anion transmembrane transporter activity	4.73E-02