GO Enrichment Analysis of Co-expressed Genes with
AT2G34620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:0015670: carbon dioxide transport | 0.00E+00 |
| 3 | GO:0006982: response to lipid hydroperoxide | 0.00E+00 |
| 4 | GO:0010335: response to non-ionic osmotic stress | 0.00E+00 |
| 5 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 6 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 1.01E-08 |
| 8 | GO:0010207: photosystem II assembly | 5.45E-08 |
| 9 | GO:0006094: gluconeogenesis | 2.24E-06 |
| 10 | GO:0006810: transport | 1.07E-05 |
| 11 | GO:0055114: oxidation-reduction process | 1.10E-05 |
| 12 | GO:0015994: chlorophyll metabolic process | 7.53E-05 |
| 13 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.28E-04 |
| 14 | GO:0042549: photosystem II stabilization | 1.70E-04 |
| 15 | GO:0009658: chloroplast organization | 1.75E-04 |
| 16 | GO:0019722: calcium-mediated signaling | 2.85E-04 |
| 17 | GO:0071277: cellular response to calcium ion | 3.47E-04 |
| 18 | GO:0043087: regulation of GTPase activity | 3.47E-04 |
| 19 | GO:0071461: cellular response to redox state | 3.47E-04 |
| 20 | GO:0046167: glycerol-3-phosphate biosynthetic process | 3.47E-04 |
| 21 | GO:0043007: maintenance of rDNA | 3.47E-04 |
| 22 | GO:0090548: response to nitrate starvation | 3.47E-04 |
| 23 | GO:1902458: positive regulation of stomatal opening | 3.47E-04 |
| 24 | GO:0034337: RNA folding | 3.47E-04 |
| 25 | GO:0015969: guanosine tetraphosphate metabolic process | 3.47E-04 |
| 26 | GO:0051180: vitamin transport | 3.47E-04 |
| 27 | GO:0030974: thiamine pyrophosphate transport | 3.47E-04 |
| 28 | GO:0046467: membrane lipid biosynthetic process | 3.47E-04 |
| 29 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 3.47E-04 |
| 30 | GO:1902025: nitrate import | 3.47E-04 |
| 31 | GO:0015979: photosynthesis | 3.75E-04 |
| 32 | GO:0009704: de-etiolation | 3.76E-04 |
| 33 | GO:0019252: starch biosynthetic process | 4.70E-04 |
| 34 | GO:0006098: pentose-phosphate shunt | 5.52E-04 |
| 35 | GO:0010205: photoinhibition | 6.53E-04 |
| 36 | GO:0006096: glycolytic process | 6.67E-04 |
| 37 | GO:0007267: cell-cell signaling | 7.07E-04 |
| 38 | GO:0006729: tetrahydrobiopterin biosynthetic process | 7.56E-04 |
| 39 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 7.56E-04 |
| 40 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 7.56E-04 |
| 41 | GO:0042819: vitamin B6 biosynthetic process | 7.56E-04 |
| 42 | GO:0035304: regulation of protein dephosphorylation | 7.56E-04 |
| 43 | GO:0080005: photosystem stoichiometry adjustment | 7.56E-04 |
| 44 | GO:0015893: drug transport | 7.56E-04 |
| 45 | GO:0006650: glycerophospholipid metabolic process | 7.56E-04 |
| 46 | GO:0009773: photosynthetic electron transport in photosystem I | 8.76E-04 |
| 47 | GO:0044375: regulation of peroxisome size | 1.22E-03 |
| 48 | GO:0006081: cellular aldehyde metabolic process | 1.22E-03 |
| 49 | GO:0046621: negative regulation of organ growth | 1.22E-03 |
| 50 | GO:0006000: fructose metabolic process | 1.22E-03 |
| 51 | GO:0046168: glycerol-3-phosphate catabolic process | 1.22E-03 |
| 52 | GO:0044550: secondary metabolite biosynthetic process | 1.48E-03 |
| 53 | GO:0006833: water transport | 1.59E-03 |
| 54 | GO:0010025: wax biosynthetic process | 1.59E-03 |
| 55 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.76E-03 |
| 56 | GO:2001141: regulation of RNA biosynthetic process | 1.76E-03 |
| 57 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.76E-03 |
| 58 | GO:0009152: purine ribonucleotide biosynthetic process | 1.76E-03 |
| 59 | GO:0046653: tetrahydrofolate metabolic process | 1.76E-03 |
| 60 | GO:0006072: glycerol-3-phosphate metabolic process | 1.76E-03 |
| 61 | GO:0008615: pyridoxine biosynthetic process | 1.76E-03 |
| 62 | GO:0042823: pyridoxal phosphate biosynthetic process | 1.76E-03 |
| 63 | GO:0010021: amylopectin biosynthetic process | 2.37E-03 |
| 64 | GO:0015689: molybdate ion transport | 2.37E-03 |
| 65 | GO:0010600: regulation of auxin biosynthetic process | 2.37E-03 |
| 66 | GO:0045038: protein import into chloroplast thylakoid membrane | 3.03E-03 |
| 67 | GO:0035434: copper ion transmembrane transport | 3.03E-03 |
| 68 | GO:0009107: lipoate biosynthetic process | 3.03E-03 |
| 69 | GO:0016123: xanthophyll biosynthetic process | 3.03E-03 |
| 70 | GO:0006465: signal peptide processing | 3.03E-03 |
| 71 | GO:0034220: ion transmembrane transport | 3.24E-03 |
| 72 | GO:0006857: oligopeptide transport | 3.38E-03 |
| 73 | GO:0010182: sugar mediated signaling pathway | 3.49E-03 |
| 74 | GO:0006520: cellular amino acid metabolic process | 3.49E-03 |
| 75 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 3.74E-03 |
| 76 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 3.74E-03 |
| 77 | GO:0010189: vitamin E biosynthetic process | 4.50E-03 |
| 78 | GO:0010019: chloroplast-nucleus signaling pathway | 4.50E-03 |
| 79 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 4.50E-03 |
| 80 | GO:0045926: negative regulation of growth | 4.50E-03 |
| 81 | GO:1901259: chloroplast rRNA processing | 4.50E-03 |
| 82 | GO:0000054: ribosomal subunit export from nucleus | 4.50E-03 |
| 83 | GO:0032502: developmental process | 4.60E-03 |
| 84 | GO:0010161: red light signaling pathway | 5.32E-03 |
| 85 | GO:1900056: negative regulation of leaf senescence | 5.32E-03 |
| 86 | GO:0048437: floral organ development | 5.32E-03 |
| 87 | GO:1900057: positive regulation of leaf senescence | 5.32E-03 |
| 88 | GO:0050829: defense response to Gram-negative bacterium | 5.32E-03 |
| 89 | GO:2000070: regulation of response to water deprivation | 6.17E-03 |
| 90 | GO:0016559: peroxisome fission | 6.17E-03 |
| 91 | GO:0007155: cell adhesion | 6.17E-03 |
| 92 | GO:0048564: photosystem I assembly | 6.17E-03 |
| 93 | GO:0010928: regulation of auxin mediated signaling pathway | 6.17E-03 |
| 94 | GO:0042255: ribosome assembly | 6.17E-03 |
| 95 | GO:0006353: DNA-templated transcription, termination | 6.17E-03 |
| 96 | GO:0009690: cytokinin metabolic process | 6.17E-03 |
| 97 | GO:0010027: thylakoid membrane organization | 6.23E-03 |
| 98 | GO:0006526: arginine biosynthetic process | 7.08E-03 |
| 99 | GO:0032544: plastid translation | 7.08E-03 |
| 100 | GO:0009932: cell tip growth | 7.08E-03 |
| 101 | GO:0006002: fructose 6-phosphate metabolic process | 7.08E-03 |
| 102 | GO:0071482: cellular response to light stimulus | 7.08E-03 |
| 103 | GO:0015996: chlorophyll catabolic process | 7.08E-03 |
| 104 | GO:0007186: G-protein coupled receptor signaling pathway | 7.08E-03 |
| 105 | GO:0009657: plastid organization | 7.08E-03 |
| 106 | GO:0010411: xyloglucan metabolic process | 7.35E-03 |
| 107 | GO:0006783: heme biosynthetic process | 8.04E-03 |
| 108 | GO:0006754: ATP biosynthetic process | 8.04E-03 |
| 109 | GO:0009821: alkaloid biosynthetic process | 8.04E-03 |
| 110 | GO:0051865: protein autoubiquitination | 8.04E-03 |
| 111 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 8.04E-03 |
| 112 | GO:0090333: regulation of stomatal closure | 8.04E-03 |
| 113 | GO:0006633: fatty acid biosynthetic process | 8.67E-03 |
| 114 | GO:0006779: porphyrin-containing compound biosynthetic process | 9.03E-03 |
| 115 | GO:0010380: regulation of chlorophyll biosynthetic process | 9.03E-03 |
| 116 | GO:0009688: abscisic acid biosynthetic process | 1.01E-02 |
| 117 | GO:0043069: negative regulation of programmed cell death | 1.01E-02 |
| 118 | GO:0009641: shade avoidance | 1.01E-02 |
| 119 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.01E-02 |
| 120 | GO:0016051: carbohydrate biosynthetic process | 1.03E-02 |
| 121 | GO:0006352: DNA-templated transcription, initiation | 1.12E-02 |
| 122 | GO:0019684: photosynthesis, light reaction | 1.12E-02 |
| 123 | GO:0043085: positive regulation of catalytic activity | 1.12E-02 |
| 124 | GO:0006415: translational termination | 1.12E-02 |
| 125 | GO:0006631: fatty acid metabolic process | 1.23E-02 |
| 126 | GO:0045037: protein import into chloroplast stroma | 1.23E-02 |
| 127 | GO:0010114: response to red light | 1.34E-02 |
| 128 | GO:0018107: peptidyl-threonine phosphorylation | 1.34E-02 |
| 129 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.34E-02 |
| 130 | GO:0009725: response to hormone | 1.34E-02 |
| 131 | GO:0009767: photosynthetic electron transport chain | 1.34E-02 |
| 132 | GO:0005986: sucrose biosynthetic process | 1.34E-02 |
| 133 | GO:0042546: cell wall biogenesis | 1.39E-02 |
| 134 | GO:0019253: reductive pentose-phosphate cycle | 1.46E-02 |
| 135 | GO:0010223: secondary shoot formation | 1.46E-02 |
| 136 | GO:0009266: response to temperature stimulus | 1.46E-02 |
| 137 | GO:0034605: cellular response to heat | 1.46E-02 |
| 138 | GO:0010143: cutin biosynthetic process | 1.46E-02 |
| 139 | GO:0007031: peroxisome organization | 1.59E-02 |
| 140 | GO:0042343: indole glucosinolate metabolic process | 1.59E-02 |
| 141 | GO:0009833: plant-type primary cell wall biogenesis | 1.71E-02 |
| 142 | GO:0019762: glucosinolate catabolic process | 1.71E-02 |
| 143 | GO:0009585: red, far-red light phototransduction | 1.81E-02 |
| 144 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.98E-02 |
| 145 | GO:0006825: copper ion transport | 1.98E-02 |
| 146 | GO:0098542: defense response to other organism | 2.12E-02 |
| 147 | GO:0006306: DNA methylation | 2.12E-02 |
| 148 | GO:0031408: oxylipin biosynthetic process | 2.12E-02 |
| 149 | GO:0043086: negative regulation of catalytic activity | 2.14E-02 |
| 150 | GO:0010017: red or far-red light signaling pathway | 2.26E-02 |
| 151 | GO:0016226: iron-sulfur cluster assembly | 2.26E-02 |
| 152 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.26E-02 |
| 153 | GO:0071555: cell wall organization | 2.35E-02 |
| 154 | GO:0009306: protein secretion | 2.55E-02 |
| 155 | GO:0006817: phosphate ion transport | 2.55E-02 |
| 156 | GO:0009561: megagametogenesis | 2.55E-02 |
| 157 | GO:0006396: RNA processing | 2.65E-02 |
| 158 | GO:0009742: brassinosteroid mediated signaling pathway | 2.73E-02 |
| 159 | GO:0006606: protein import into nucleus | 2.85E-02 |
| 160 | GO:0048868: pollen tube development | 3.01E-02 |
| 161 | GO:0009741: response to brassinosteroid | 3.01E-02 |
| 162 | GO:0045489: pectin biosynthetic process | 3.01E-02 |
| 163 | GO:0009646: response to absence of light | 3.17E-02 |
| 164 | GO:0008654: phospholipid biosynthetic process | 3.33E-02 |
| 165 | GO:0009791: post-embryonic development | 3.33E-02 |
| 166 | GO:0009058: biosynthetic process | 3.40E-02 |
| 167 | GO:0032259: methylation | 3.44E-02 |
| 168 | GO:0007264: small GTPase mediated signal transduction | 3.67E-02 |
| 169 | GO:0010583: response to cyclopentenone | 3.67E-02 |
| 170 | GO:0030163: protein catabolic process | 3.84E-02 |
| 171 | GO:0006413: translational initiation | 4.14E-02 |
| 172 | GO:0005975: carbohydrate metabolic process | 4.68E-02 |
| 173 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 4.73E-02 |
| 174 | GO:0042128: nitrate assimilation | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 2 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 3 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
| 5 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 6 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 8 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 9 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 10 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 11 | GO:0004332: fructose-bisphosphate aldolase activity | 2.73E-06 |
| 12 | GO:0018708: thiol S-methyltransferase activity | 5.43E-06 |
| 13 | GO:0004373: glycogen (starch) synthase activity | 1.92E-05 |
| 14 | GO:0016491: oxidoreductase activity | 3.39E-05 |
| 15 | GO:0009011: starch synthase activity | 7.53E-05 |
| 16 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 3.47E-04 |
| 17 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 3.47E-04 |
| 18 | GO:0046906: tetrapyrrole binding | 3.47E-04 |
| 19 | GO:0090422: thiamine pyrophosphate transporter activity | 3.47E-04 |
| 20 | GO:0080132: fatty acid alpha-hydroxylase activity | 3.47E-04 |
| 21 | GO:0010242: oxygen evolving activity | 3.47E-04 |
| 22 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 3.47E-04 |
| 23 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.61E-04 |
| 24 | GO:0071949: FAD binding | 5.52E-04 |
| 25 | GO:0008728: GTP diphosphokinase activity | 7.56E-04 |
| 26 | GO:0008883: glutamyl-tRNA reductase activity | 7.56E-04 |
| 27 | GO:0047746: chlorophyllase activity | 7.56E-04 |
| 28 | GO:0042389: omega-3 fatty acid desaturase activity | 7.56E-04 |
| 29 | GO:0033201: alpha-1,4-glucan synthase activity | 7.56E-04 |
| 30 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 7.56E-04 |
| 31 | GO:0043024: ribosomal small subunit binding | 7.56E-04 |
| 32 | GO:0019172: glyoxalase III activity | 7.56E-04 |
| 33 | GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | 7.56E-04 |
| 34 | GO:0004802: transketolase activity | 7.56E-04 |
| 35 | GO:0005215: transporter activity | 1.04E-03 |
| 36 | GO:0031072: heat shock protein binding | 1.13E-03 |
| 37 | GO:0004565: beta-galactosidase activity | 1.13E-03 |
| 38 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.22E-03 |
| 39 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 1.22E-03 |
| 40 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 1.22E-03 |
| 41 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.22E-03 |
| 42 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.22E-03 |
| 43 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 1.22E-03 |
| 44 | GO:0016992: lipoate synthase activity | 1.22E-03 |
| 45 | GO:0032947: protein complex scaffold | 1.22E-03 |
| 46 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.76E-03 |
| 47 | GO:0016851: magnesium chelatase activity | 1.76E-03 |
| 48 | GO:0042277: peptide binding | 2.37E-03 |
| 49 | GO:0001053: plastid sigma factor activity | 2.37E-03 |
| 50 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.37E-03 |
| 51 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 2.37E-03 |
| 52 | GO:0016987: sigma factor activity | 2.37E-03 |
| 53 | GO:0015098: molybdate ion transmembrane transporter activity | 2.37E-03 |
| 54 | GO:0005506: iron ion binding | 2.49E-03 |
| 55 | GO:0003727: single-stranded RNA binding | 2.77E-03 |
| 56 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 3.03E-03 |
| 57 | GO:0008080: N-acetyltransferase activity | 3.49E-03 |
| 58 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 3.74E-03 |
| 59 | GO:0035673: oligopeptide transmembrane transporter activity | 3.74E-03 |
| 60 | GO:0004462: lactoylglutathione lyase activity | 3.74E-03 |
| 61 | GO:0042578: phosphoric ester hydrolase activity | 3.74E-03 |
| 62 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.31E-03 |
| 63 | GO:0048038: quinone binding | 4.31E-03 |
| 64 | GO:0102391: decanoate--CoA ligase activity | 4.50E-03 |
| 65 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 4.50E-03 |
| 66 | GO:0004467: long-chain fatty acid-CoA ligase activity | 5.32E-03 |
| 67 | GO:0019899: enzyme binding | 5.32E-03 |
| 68 | GO:0015250: water channel activity | 6.23E-03 |
| 69 | GO:0019843: rRNA binding | 6.48E-03 |
| 70 | GO:0008135: translation factor activity, RNA binding | 7.08E-03 |
| 71 | GO:0005375: copper ion transmembrane transporter activity | 7.08E-03 |
| 72 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.35E-03 |
| 73 | GO:0004871: signal transducer activity | 7.73E-03 |
| 74 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 8.04E-03 |
| 75 | GO:0046910: pectinesterase inhibitor activity | 8.93E-03 |
| 76 | GO:0016844: strictosidine synthase activity | 9.03E-03 |
| 77 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 9.03E-03 |
| 78 | GO:0030234: enzyme regulator activity | 1.01E-02 |
| 79 | GO:0003746: translation elongation factor activity | 1.03E-02 |
| 80 | GO:0015198: oligopeptide transporter activity | 1.23E-02 |
| 81 | GO:0042802: identical protein binding | 1.33E-02 |
| 82 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.34E-02 |
| 83 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.45E-02 |
| 84 | GO:0035091: phosphatidylinositol binding | 1.45E-02 |
| 85 | GO:0008266: poly(U) RNA binding | 1.46E-02 |
| 86 | GO:0031624: ubiquitin conjugating enzyme binding | 1.46E-02 |
| 87 | GO:0051287: NAD binding | 1.62E-02 |
| 88 | GO:0031409: pigment binding | 1.71E-02 |
| 89 | GO:0051536: iron-sulfur cluster binding | 1.85E-02 |
| 90 | GO:0016887: ATPase activity | 1.91E-02 |
| 91 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.26E-02 |
| 92 | GO:0016760: cellulose synthase (UDP-forming) activity | 2.40E-02 |
| 93 | GO:0051082: unfolded protein binding | 2.57E-02 |
| 94 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.08E-02 |
| 95 | GO:0004872: receptor activity | 3.33E-02 |
| 96 | GO:0004518: nuclease activity | 3.67E-02 |
| 97 | GO:0008565: protein transporter activity | 3.85E-02 |
| 98 | GO:0016759: cellulose synthase activity | 4.01E-02 |
| 99 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.19E-02 |
| 100 | GO:0016168: chlorophyll binding | 4.73E-02 |
| 101 | GO:0005525: GTP binding | 4.82E-02 |