Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G34510

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
2GO:1901698: response to nitrogen compound0.00E+00
3GO:0007638: mechanosensory behavior0.00E+00
4GO:0097164: ammonium ion metabolic process0.00E+00
5GO:0010081: regulation of inflorescence meristem growth0.00E+00
6GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
7GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
8GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.45E-07
9GO:2000038: regulation of stomatal complex development1.71E-05
10GO:0032502: developmental process1.04E-04
11GO:0034972: histone H3-R26 methylation1.46E-04
12GO:0010480: microsporocyte differentiation1.46E-04
13GO:0010080: regulation of floral meristem growth1.46E-04
14GO:0034971: histone H3-R17 methylation1.46E-04
15GO:0034970: histone H3-R2 methylation1.46E-04
16GO:0010582: floral meristem determinacy2.99E-04
17GO:0010434: bract formation3.33E-04
18GO:0048439: flower morphogenesis3.33E-04
19GO:0070981: L-asparagine biosynthetic process3.33E-04
20GO:0009786: regulation of asymmetric cell division3.33E-04
21GO:0006529: asparagine biosynthetic process3.33E-04
22GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine3.33E-04
23GO:2000123: positive regulation of stomatal complex development3.33E-04
24GO:0010254: nectary development3.33E-04
25GO:0009944: polarity specification of adaxial/abaxial axis5.33E-04
26GO:0010022: meristem determinacy5.47E-04
27GO:0071705: nitrogen compound transport5.47E-04
28GO:0051604: protein maturation5.47E-04
29GO:0016050: vesicle organization5.47E-04
30GO:0009954: proximal/distal pattern formation5.47E-04
31GO:0045910: negative regulation of DNA recombination5.47E-04
32GO:0006468: protein phosphorylation6.59E-04
33GO:0019048: modulation by virus of host morphology or physiology7.83E-04
34GO:0031048: chromatin silencing by small RNA7.83E-04
35GO:0046739: transport of virus in multicellular host7.83E-04
36GO:2000904: regulation of starch metabolic process7.83E-04
37GO:0051513: regulation of monopolar cell growth7.83E-04
38GO:0007231: osmosensory signaling pathway7.83E-04
39GO:0051639: actin filament network formation7.83E-04
40GO:0044211: CTP salvage7.83E-04
41GO:0051567: histone H3-K9 methylation1.04E-03
42GO:0044206: UMP salvage1.04E-03
43GO:0033500: carbohydrate homeostasis1.04E-03
44GO:0009165: nucleotide biosynthetic process1.04E-03
45GO:0051764: actin crosslink formation1.04E-03
46GO:0071249: cellular response to nitrate1.04E-03
47GO:0009646: response to absence of light1.11E-03
48GO:0016131: brassinosteroid metabolic process1.31E-03
49GO:1902183: regulation of shoot apical meristem development1.31E-03
50GO:0032876: negative regulation of DNA endoreduplication1.31E-03
51GO:0030308: negative regulation of cell growth1.31E-03
52GO:0010375: stomatal complex patterning1.31E-03
53GO:0006206: pyrimidine nucleobase metabolic process1.61E-03
54GO:0018258: protein O-linked glycosylation via hydroxyproline1.61E-03
55GO:0009228: thiamine biosynthetic process1.61E-03
56GO:0006655: phosphatidylglycerol biosynthetic process1.61E-03
57GO:0006139: nucleobase-containing compound metabolic process1.61E-03
58GO:0016458: gene silencing1.61E-03
59GO:0010405: arabinogalactan protein metabolic process1.61E-03
60GO:0051607: defense response to virus1.71E-03
61GO:0040008: regulation of growth1.88E-03
62GO:0030488: tRNA methylation1.93E-03
63GO:2000037: regulation of stomatal complex patterning1.93E-03
64GO:0048437: floral organ development2.27E-03
65GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.27E-03
66GO:0009787: regulation of abscisic acid-activated signaling pathway2.63E-03
67GO:0030162: regulation of proteolysis2.63E-03
68GO:0042255: ribosome assembly2.63E-03
69GO:0006353: DNA-templated transcription, termination2.63E-03
70GO:0010497: plasmodesmata-mediated intercellular transport3.00E-03
71GO:0007389: pattern specification process3.00E-03
72GO:0009827: plant-type cell wall modification3.00E-03
73GO:2000024: regulation of leaf development3.40E-03
74GO:0000902: cell morphogenesis3.40E-03
75GO:0009051: pentose-phosphate shunt, oxidative branch3.40E-03
76GO:0009638: phototropism3.81E-03
77GO:0016310: phosphorylation3.90E-03
78GO:0030422: production of siRNA involved in RNA interference4.23E-03
79GO:0048829: root cap development4.23E-03
80GO:0009641: shade avoidance4.23E-03
81GO:0006298: mismatch repair4.23E-03
82GO:0080167: response to karrikin4.56E-03
83GO:0009773: photosynthetic electron transport in photosystem I4.67E-03
84GO:0048229: gametophyte development4.67E-03
85GO:0006816: calcium ion transport4.67E-03
86GO:0016024: CDP-diacylglycerol biosynthetic process5.13E-03
87GO:0015706: nitrate transport5.13E-03
88GO:0008361: regulation of cell size5.13E-03
89GO:0009785: blue light signaling pathway5.60E-03
90GO:0010628: positive regulation of gene expression5.60E-03
91GO:0006006: glucose metabolic process5.60E-03
92GO:0010075: regulation of meristem growth5.60E-03
93GO:0009767: photosynthetic electron transport chain5.60E-03
94GO:0016567: protein ubiquitination5.94E-03
95GO:0006541: glutamine metabolic process6.09E-03
96GO:0009934: regulation of meristem structural organization6.09E-03
97GO:0010167: response to nitrate6.59E-03
98GO:0090351: seedling development6.59E-03
99GO:0070588: calcium ion transmembrane transport6.59E-03
100GO:0006071: glycerol metabolic process7.10E-03
101GO:0051017: actin filament bundle assembly7.63E-03
102GO:0006825: copper ion transport8.18E-03
103GO:0006306: DNA methylation8.73E-03
104GO:0009058: biosynthetic process9.67E-03
105GO:0010082: regulation of root meristem growth9.89E-03
106GO:0010227: floral organ abscission9.89E-03
107GO:0006284: base-excision repair1.05E-02
108GO:0009734: auxin-activated signaling pathway1.16E-02
109GO:0008033: tRNA processing1.17E-02
110GO:0048653: anther development1.17E-02
111GO:0042631: cellular response to water deprivation1.17E-02
112GO:0006342: chromatin silencing1.24E-02
113GO:0007623: circadian rhythm1.27E-02
114GO:0048544: recognition of pollen1.30E-02
115GO:0008654: phospholipid biosynthetic process1.37E-02
116GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.42E-02
117GO:0016132: brassinosteroid biosynthetic process1.43E-02
118GO:0009416: response to light stimulus1.55E-02
119GO:0010090: trichome morphogenesis1.57E-02
120GO:0010252: auxin homeostasis1.64E-02
121GO:0009567: double fertilization forming a zygote and endosperm1.64E-02
122GO:0007267: cell-cell signaling1.72E-02
123GO:0009816: defense response to bacterium, incompatible interaction1.94E-02
124GO:0006974: cellular response to DNA damage stimulus2.01E-02
125GO:0010411: xyloglucan metabolic process2.09E-02
126GO:0010311: lateral root formation2.33E-02
127GO:0000160: phosphorelay signal transduction system2.33E-02
128GO:0009813: flavonoid biosynthetic process2.33E-02
129GO:0006811: ion transport2.41E-02
130GO:0006897: endocytosis3.01E-02
131GO:0006631: fatty acid metabolic process3.01E-02
132GO:0007165: signal transduction3.07E-02
133GO:0009926: auxin polar transport3.19E-02
134GO:0042546: cell wall biogenesis3.28E-02
135GO:0006855: drug transmembrane transport3.56E-02
136GO:0031347: regulation of defense response3.65E-02
137GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.65E-02
138GO:0048364: root development3.75E-02
139GO:0042538: hyperosmotic salinity response3.75E-02
140GO:0009736: cytokinin-activated signaling pathway3.94E-02
141GO:0051603: proteolysis involved in cellular protein catabolic process4.04E-02
142GO:0006417: regulation of translation4.24E-02
143GO:0009909: regulation of flower development4.24E-02
144GO:0009733: response to auxin4.32E-02
145GO:0048316: seed development4.54E-02
RankGO TermAdjusted P value
1GO:0047661: amino-acid racemase activity0.00E+00
2GO:0019136: deoxynucleoside kinase activity0.00E+00
3GO:0016301: kinase activity1.11E-04
4GO:0004008: copper-exporting ATPase activity1.46E-04
5GO:0004071: aspartate-ammonia ligase activity1.46E-04
6GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity1.46E-04
7GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.46E-04
8GO:0004674: protein serine/threonine kinase activity1.70E-04
9GO:0042803: protein homodimerization activity2.00E-04
10GO:0035241: protein-arginine omega-N monomethyltransferase activity3.33E-04
11GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity3.33E-04
12GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity3.33E-04
13GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity3.33E-04
14GO:0008469: histone-arginine N-methyltransferase activity5.47E-04
15GO:0070330: aromatase activity5.47E-04
16GO:0035197: siRNA binding7.83E-04
17GO:0005524: ATP binding9.19E-04
18GO:0019199: transmembrane receptor protein kinase activity1.04E-03
19GO:0004845: uracil phosphoribosyltransferase activity1.04E-03
20GO:0004345: glucose-6-phosphate dehydrogenase activity1.04E-03
21GO:0016773: phosphotransferase activity, alcohol group as acceptor1.31E-03
22GO:0018685: alkane 1-monooxygenase activity1.31E-03
23GO:0008725: DNA-3-methyladenine glycosylase activity1.31E-03
24GO:0004672: protein kinase activity1.41E-03
25GO:0004252: serine-type endopeptidase activity1.52E-03
26GO:0030983: mismatched DNA binding1.61E-03
27GO:0004605: phosphatidate cytidylyltransferase activity1.61E-03
28GO:1990714: hydroxyproline O-galactosyltransferase activity1.61E-03
29GO:0004849: uridine kinase activity1.93E-03
30GO:0005375: copper ion transmembrane transporter activity3.00E-03
31GO:0008889: glycerophosphodiester phosphodiesterase activity3.40E-03
32GO:0009672: auxin:proton symporter activity3.81E-03
33GO:0004521: endoribonuclease activity5.13E-03
34GO:0030246: carbohydrate binding5.52E-03
35GO:0010329: auxin efflux transmembrane transporter activity5.60E-03
36GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism5.60E-03
37GO:0031072: heat shock protein binding5.60E-03
38GO:0005262: calcium channel activity5.60E-03
39GO:0004871: signal transducer activity6.08E-03
40GO:0005345: purine nucleobase transmembrane transporter activity8.18E-03
41GO:0033612: receptor serine/threonine kinase binding8.73E-03
42GO:0003727: single-stranded RNA binding1.05E-02
43GO:0050662: coenzyme binding1.30E-02
44GO:0019901: protein kinase binding1.37E-02
45GO:0016762: xyloglucan:xyloglucosyl transferase activity1.43E-02
46GO:0000156: phosphorelay response regulator activity1.57E-02
47GO:0051015: actin filament binding1.57E-02
48GO:0016759: cellulose synthase activity1.64E-02
49GO:0003684: damaged DNA binding1.64E-02
50GO:0008168: methyltransferase activity1.89E-02
51GO:0016798: hydrolase activity, acting on glycosyl bonds2.09E-02
52GO:0008236: serine-type peptidase activity2.17E-02
53GO:0015238: drug transmembrane transporter activity2.33E-02
54GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.49E-02
55GO:0004712: protein serine/threonine/tyrosine kinase activity2.83E-02
56GO:0050661: NADP binding2.92E-02
57GO:0004185: serine-type carboxypeptidase activity3.19E-02
58GO:0035091: phosphatidylinositol binding3.37E-02
59GO:0043621: protein self-association3.37E-02
60GO:0003690: double-stranded DNA binding4.04E-02
61GO:0031625: ubiquitin protein ligase binding4.24E-02
62GO:0005215: transporter activity4.24E-02
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Gene type



Gene DE type