Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G33430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090615: mitochondrial mRNA processing0.00E+00
2GO:0000492: box C/D snoRNP assembly0.00E+00
3GO:0031222: arabinan catabolic process0.00E+00
4GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
5GO:0090071: negative regulation of ribosome biogenesis0.00E+00
6GO:0090627: plant epidermal cell differentiation0.00E+00
7GO:0009606: tropism0.00E+00
8GO:0000491: small nucleolar ribonucleoprotein complex assembly0.00E+00
9GO:1903224: regulation of endodermal cell differentiation0.00E+00
10GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
11GO:0097164: ammonium ion metabolic process0.00E+00
12GO:0045184: establishment of protein localization0.00E+00
13GO:0009451: RNA modification3.62E-07
14GO:0006518: peptide metabolic process3.77E-05
15GO:1900865: chloroplast RNA modification7.14E-05
16GO:0009734: auxin-activated signaling pathway7.39E-05
17GO:0016556: mRNA modification8.09E-05
18GO:2000038: regulation of stomatal complex development1.40E-04
19GO:0009913: epidermal cell differentiation3.03E-04
20GO:0042793: transcription from plastid promoter3.03E-04
21GO:1901259: chloroplast rRNA processing4.05E-04
22GO:0035987: endodermal cell differentiation5.03E-04
23GO:0006436: tryptophanyl-tRNA aminoacylation5.03E-04
24GO:0034757: negative regulation of iron ion transport5.03E-04
25GO:0042659: regulation of cell fate specification5.03E-04
26GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process5.03E-04
27GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.03E-04
28GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic5.03E-04
29GO:0070509: calcium ion import5.03E-04
30GO:0090558: plant epidermis development5.03E-04
31GO:0010063: positive regulation of trichoblast fate specification5.03E-04
32GO:0010480: microsporocyte differentiation5.03E-04
33GO:0048437: floral organ development5.20E-04
34GO:0007389: pattern specification process7.90E-04
35GO:0009657: plastid organization7.90E-04
36GO:0000902: cell morphogenesis9.43E-04
37GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.55E-04
38GO:1904143: positive regulation of carotenoid biosynthetic process1.08E-03
39GO:0080009: mRNA methylation1.08E-03
40GO:0006529: asparagine biosynthetic process1.08E-03
41GO:2000123: positive regulation of stomatal complex development1.08E-03
42GO:1900871: chloroplast mRNA modification1.08E-03
43GO:1902326: positive regulation of chlorophyll biosynthetic process1.08E-03
44GO:0070981: L-asparagine biosynthetic process1.08E-03
45GO:0010271: regulation of chlorophyll catabolic process1.08E-03
46GO:0018026: peptidyl-lysine monomethylation1.08E-03
47GO:0009662: etioplast organization1.08E-03
48GO:1900033: negative regulation of trichome patterning1.08E-03
49GO:0048829: root cap development1.29E-03
50GO:0009793: embryo development ending in seed dormancy1.52E-03
51GO:0045037: protein import into chloroplast stroma1.71E-03
52GO:0042780: tRNA 3'-end processing1.77E-03
53GO:0001578: microtubule bundle formation1.77E-03
54GO:0009432: SOS response1.77E-03
55GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.77E-03
56GO:0045910: negative regulation of DNA recombination1.77E-03
57GO:0090708: specification of plant organ axis polarity1.77E-03
58GO:0080117: secondary growth1.77E-03
59GO:0044210: 'de novo' CTP biosynthetic process1.77E-03
60GO:0048481: plant ovule development2.30E-03
61GO:0009658: chloroplast organization2.35E-03
62GO:0000730: DNA recombinase assembly2.57E-03
63GO:0010371: regulation of gibberellin biosynthetic process2.57E-03
64GO:1902476: chloride transmembrane transport2.57E-03
65GO:0010071: root meristem specification2.57E-03
66GO:0051513: regulation of monopolar cell growth2.57E-03
67GO:0010239: chloroplast mRNA processing2.57E-03
68GO:0010306: rhamnogalacturonan II biosynthetic process2.57E-03
69GO:0019048: modulation by virus of host morphology or physiology2.57E-03
70GO:0046739: transport of virus in multicellular host2.57E-03
71GO:0031048: chromatin silencing by small RNA2.57E-03
72GO:0006418: tRNA aminoacylation for protein translation3.37E-03
73GO:0006479: protein methylation3.46E-03
74GO:0048629: trichome patterning3.46E-03
75GO:1900864: mitochondrial RNA modification3.46E-03
76GO:0042274: ribosomal small subunit biogenesis3.46E-03
77GO:0051322: anaphase3.46E-03
78GO:0030104: water homeostasis3.46E-03
79GO:0006221: pyrimidine nucleotide biosynthetic process3.46E-03
80GO:0051567: histone H3-K9 methylation3.46E-03
81GO:0009790: embryo development3.68E-03
82GO:0016998: cell wall macromolecule catabolic process3.71E-03
83GO:0003333: amino acid transmembrane transport3.71E-03
84GO:0009926: auxin polar transport4.32E-03
85GO:0040008: regulation of growth4.43E-03
86GO:0048497: maintenance of floral organ identity4.44E-03
87GO:0010158: abaxial cell fate specification4.44E-03
88GO:0032876: negative regulation of DNA endoreduplication4.44E-03
89GO:0030308: negative regulation of cell growth4.44E-03
90GO:0010375: stomatal complex patterning4.44E-03
91GO:0042127: regulation of cell proliferation4.82E-03
92GO:0050665: hydrogen peroxide biosynthetic process5.50E-03
93GO:0010405: arabinogalactan protein metabolic process5.50E-03
94GO:0042549: photosystem II stabilization5.50E-03
95GO:0009959: negative gravitropism5.50E-03
96GO:0006655: phosphatidylglycerol biosynthetic process5.50E-03
97GO:0016554: cytidine to uridine editing5.50E-03
98GO:0048831: regulation of shoot system development5.50E-03
99GO:0010315: auxin efflux5.50E-03
100GO:0018258: protein O-linked glycosylation via hydroxyproline5.50E-03
101GO:0016458: gene silencing5.50E-03
102GO:0009416: response to light stimulus6.02E-03
103GO:0048868: pollen tube development6.10E-03
104GO:0009646: response to absence of light6.56E-03
105GO:0009099: valine biosynthetic process6.63E-03
106GO:0009854: oxidative photosynthetic carbon pathway6.63E-03
107GO:2000037: regulation of stomatal complex patterning6.63E-03
108GO:2000067: regulation of root morphogenesis6.63E-03
109GO:0009955: adaxial/abaxial pattern specification6.63E-03
110GO:0009082: branched-chain amino acid biosynthetic process6.63E-03
111GO:0006458: 'de novo' protein folding6.63E-03
112GO:0042026: protein refolding6.63E-03
113GO:0017148: negative regulation of translation6.63E-03
114GO:0009942: longitudinal axis specification6.63E-03
115GO:0048509: regulation of meristem development6.63E-03
116GO:0048825: cotyledon development7.04E-03
117GO:0080156: mitochondrial mRNA modification7.54E-03
118GO:0010103: stomatal complex morphogenesis7.85E-03
119GO:0006955: immune response7.85E-03
120GO:0048528: post-embryonic root development7.85E-03
121GO:0042148: strand invasion7.85E-03
122GO:0006821: chloride transport7.85E-03
123GO:0010050: vegetative phase change7.85E-03
124GO:0010583: response to cyclopentenone8.06E-03
125GO:0055075: potassium ion homeostasis9.14E-03
126GO:0001522: pseudouridine synthesis9.14E-03
127GO:0009850: auxin metabolic process9.14E-03
128GO:0046620: regulation of organ growth9.14E-03
129GO:0048766: root hair initiation9.14E-03
130GO:0010252: auxin homeostasis9.16E-03
131GO:0009553: embryo sac development9.57E-03
132GO:0019430: removal of superoxide radicals1.05E-02
133GO:0009827: plant-type cell wall modification1.05E-02
134GO:0010212: response to ionizing radiation1.05E-02
135GO:0010497: plasmodesmata-mediated intercellular transport1.05E-02
136GO:0009097: isoleucine biosynthetic process1.05E-02
137GO:0010204: defense response signaling pathway, resistance gene-independent1.05E-02
138GO:0032544: plastid translation1.05E-02
139GO:0009733: response to auxin1.12E-02
140GO:0000373: Group II intron splicing1.19E-02
141GO:0006098: pentose-phosphate shunt1.19E-02
142GO:0010411: xyloglucan metabolic process1.29E-02
143GO:0009638: phototropism1.34E-02
144GO:2000280: regulation of root development1.34E-02
145GO:0031425: chloroplast RNA processing1.34E-02
146GO:0030422: production of siRNA involved in RNA interference1.50E-02
147GO:0045036: protein targeting to chloroplast1.50E-02
148GO:0006298: mismatch repair1.50E-02
149GO:0006259: DNA metabolic process1.50E-02
150GO:0006535: cysteine biosynthetic process from serine1.50E-02
151GO:0000160: phosphorelay signal transduction system1.51E-02
152GO:0048229: gametophyte development1.66E-02
153GO:0006265: DNA topological change1.66E-02
154GO:1903507: negative regulation of nucleic acid-templated transcription1.66E-02
155GO:0006865: amino acid transport1.74E-02
156GO:0008361: regulation of cell size1.83E-02
157GO:0006312: mitotic recombination1.83E-02
158GO:0016024: CDP-diacylglycerol biosynthetic process1.83E-02
159GO:0010582: floral meristem determinacy1.83E-02
160GO:0006508: proteolysis1.87E-02
161GO:0009691: cytokinin biosynthetic process2.01E-02
162GO:0010075: regulation of meristem growth2.01E-02
163GO:0006094: gluconeogenesis2.01E-02
164GO:0010588: cotyledon vascular tissue pattern formation2.01E-02
165GO:0009785: blue light signaling pathway2.01E-02
166GO:0009934: regulation of meristem structural organization2.18E-02
167GO:0010207: photosystem II assembly2.18E-02
168GO:0006541: glutamine metabolic process2.18E-02
169GO:0070588: calcium ion transmembrane transport2.37E-02
170GO:0080188: RNA-directed DNA methylation2.37E-02
171GO:0042546: cell wall biogenesis2.45E-02
172GO:0006833: water transport2.56E-02
173GO:0019344: cysteine biosynthetic process2.76E-02
174GO:0080147: root hair cell development2.76E-02
175GO:0010073: meristem maintenance2.96E-02
176GO:0051302: regulation of cell division2.96E-02
177GO:0015992: proton transport3.16E-02
178GO:0010431: seed maturation3.16E-02
179GO:0061077: chaperone-mediated protein folding3.16E-02
180GO:0006306: DNA methylation3.16E-02
181GO:0009736: cytokinin-activated signaling pathway3.17E-02
182GO:0051603: proteolysis involved in cellular protein catabolic process3.28E-02
183GO:0006730: one-carbon metabolic process3.38E-02
184GO:2000022: regulation of jasmonic acid mediated signaling pathway3.38E-02
185GO:0042254: ribosome biogenesis3.53E-02
186GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.59E-02
187GO:0010082: regulation of root meristem growth3.59E-02
188GO:0071215: cellular response to abscisic acid stimulus3.59E-02
189GO:0006096: glycolytic process3.75E-02
190GO:0048316: seed development3.87E-02
191GO:0070417: cellular response to cold4.04E-02
192GO:0048366: leaf development4.21E-02
193GO:0008033: tRNA processing4.27E-02
194GO:0010087: phloem or xylem histogenesis4.27E-02
195GO:0048653: anther development4.27E-02
196GO:0042631: cellular response to water deprivation4.27E-02
197GO:0000226: microtubule cytoskeleton organization4.27E-02
198GO:0080167: response to karrikin4.49E-02
199GO:0006342: chromatin silencing4.50E-02
200GO:0009741: response to brassinosteroid4.50E-02
201GO:0009958: positive gravitropism4.50E-02
202GO:0006662: glycerol ether metabolic process4.50E-02
203GO:0010305: leaf vascular tissue pattern formation4.50E-02
204GO:0007018: microtubule-based movement4.73E-02
205GO:0006814: sodium ion transport4.73E-02
206GO:0007059: chromosome segregation4.73E-02
207GO:0048544: recognition of pollen4.73E-02
208GO:0008654: phospholipid biosynthetic process4.97E-02
209GO:0009851: auxin biosynthetic process4.97E-02
RankGO TermAdjusted P value
1GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
2GO:0004519: endonuclease activity3.72E-11
3GO:0003723: RNA binding7.82E-07
4GO:0001872: (1->3)-beta-D-glucan binding8.09E-05
5GO:0004222: metalloendopeptidase activity4.15E-04
6GO:0004830: tryptophan-tRNA ligase activity5.03E-04
7GO:0004016: adenylate cyclase activity5.03E-04
8GO:0042834: peptidoglycan binding5.03E-04
9GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.03E-04
10GO:0016274: protein-arginine N-methyltransferase activity5.03E-04
11GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity5.03E-04
12GO:0004071: aspartate-ammonia ligase activity5.03E-04
13GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity5.03E-04
14GO:0052381: tRNA dimethylallyltransferase activity5.03E-04
15GO:0004160: dihydroxy-acid dehydratase activity5.03E-04
16GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.08E-03
17GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.08E-03
18GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.08E-03
19GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.08E-03
20GO:0009884: cytokinin receptor activity1.08E-03
21GO:0009672: auxin:proton symporter activity1.11E-03
22GO:0016805: dipeptidase activity1.77E-03
23GO:0005034: osmosensor activity1.77E-03
24GO:0017150: tRNA dihydrouridine synthase activity1.77E-03
25GO:0042781: 3'-tRNA processing endoribonuclease activity1.77E-03
26GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity1.77E-03
27GO:0010329: auxin efflux transmembrane transporter activity1.95E-03
28GO:0043023: ribosomal large subunit binding2.57E-03
29GO:0008508: bile acid:sodium symporter activity2.57E-03
30GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity2.57E-03
31GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity2.57E-03
32GO:0009678: hydrogen-translocating pyrophosphatase activity2.57E-03
33GO:0003883: CTP synthase activity2.57E-03
34GO:0009041: uridylate kinase activity2.57E-03
35GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity2.57E-03
36GO:0035197: siRNA binding2.57E-03
37GO:0019843: rRNA binding2.90E-03
38GO:0004930: G-protein coupled receptor activity3.46E-03
39GO:0008891: glycolate oxidase activity3.46E-03
40GO:0046556: alpha-L-arabinofuranosidase activity3.46E-03
41GO:0016279: protein-lysine N-methyltransferase activity3.46E-03
42GO:0016836: hydro-lyase activity3.46E-03
43GO:0010328: auxin influx transmembrane transporter activity3.46E-03
44GO:0005253: anion channel activity3.46E-03
45GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.47E-03
46GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.44E-03
47GO:0004888: transmembrane signaling receptor activity4.44E-03
48GO:0004812: aminoacyl-tRNA ligase activity5.23E-03
49GO:0005247: voltage-gated chloride channel activity5.50E-03
50GO:0030983: mismatched DNA binding5.50E-03
51GO:0004605: phosphatidate cytidylyltransferase activity5.50E-03
52GO:1990714: hydroxyproline O-galactosyltransferase activity5.50E-03
53GO:0004332: fructose-bisphosphate aldolase activity5.50E-03
54GO:0004784: superoxide dismutase activity5.50E-03
55GO:0019900: kinase binding6.63E-03
56GO:0004124: cysteine synthase activity6.63E-03
57GO:0008195: phosphatidate phosphatase activity6.63E-03
58GO:0016762: xyloglucan:xyloglucosyl transferase activity7.54E-03
59GO:0030515: snoRNA binding7.85E-03
60GO:0004427: inorganic diphosphatase activity7.85E-03
61GO:0000150: recombinase activity7.85E-03
62GO:0008168: methyltransferase activity8.74E-03
63GO:0004520: endodeoxyribonuclease activity9.14E-03
64GO:0000400: four-way junction DNA binding9.14E-03
65GO:0008237: metallopeptidase activity9.74E-03
66GO:0008173: RNA methyltransferase activity1.05E-02
67GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.05E-02
68GO:0016798: hydrolase activity, acting on glycosyl bonds1.29E-02
69GO:0030247: polysaccharide binding1.29E-02
70GO:0004673: protein histidine kinase activity1.50E-02
71GO:0003735: structural constituent of ribosome1.56E-02
72GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.56E-02
73GO:0008559: xenobiotic-transporting ATPase activity1.66E-02
74GO:0044183: protein binding involved in protein folding1.66E-02
75GO:0004521: endoribonuclease activity1.83E-02
76GO:0031072: heat shock protein binding2.01E-02
77GO:0000155: phosphorelay sensor kinase activity2.01E-02
78GO:0005262: calcium channel activity2.01E-02
79GO:0009982: pseudouridine synthase activity2.01E-02
80GO:0003725: double-stranded RNA binding2.01E-02
81GO:0004565: beta-galactosidase activity2.01E-02
82GO:0051539: 4 iron, 4 sulfur cluster binding2.08E-02
83GO:0046872: metal ion binding2.15E-02
84GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.18E-02
85GO:0004185: serine-type carboxypeptidase activity2.35E-02
86GO:0005524: ATP binding2.58E-02
87GO:0015293: symporter activity2.64E-02
88GO:0003714: transcription corepressor activity2.76E-02
89GO:0043424: protein histidine kinase binding2.96E-02
90GO:0003677: DNA binding3.00E-02
91GO:0008408: 3'-5' exonuclease activity3.16E-02
92GO:0008094: DNA-dependent ATPase activity3.16E-02
93GO:0004176: ATP-dependent peptidase activity3.16E-02
94GO:0033612: receptor serine/threonine kinase binding3.16E-02
95GO:0003690: double-stranded DNA binding3.28E-02
96GO:0004601: peroxidase activity3.45E-02
97GO:0003777: microtubule motor activity3.51E-02
98GO:0015171: amino acid transmembrane transporter activity3.51E-02
99GO:0016788: hydrolase activity, acting on ester bonds3.53E-02
100GO:0030570: pectate lyase activity3.59E-02
101GO:0047134: protein-disulfide reductase activity4.04E-02
102GO:0004650: polygalacturonase activity4.11E-02
103GO:0016887: ATPase activity4.36E-02
104GO:0004527: exonuclease activity4.50E-02
105GO:0051082: unfolded protein binding4.50E-02
106GO:0003713: transcription coactivator activity4.50E-02
107GO:0001085: RNA polymerase II transcription factor binding4.50E-02
108GO:0004791: thioredoxin-disulfide reductase activity4.73E-02
109GO:0010181: FMN binding4.73E-02
110GO:0008026: ATP-dependent helicase activity4.76E-02
111GO:0019901: protein kinase binding4.97E-02
<
Gene type



Gene DE type