Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G32230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070125: mitochondrial translational elongation0.00E+00
2GO:0006429: leucyl-tRNA aminoacylation0.00E+00
3GO:1905421: regulation of plant organ morphogenesis0.00E+00
4GO:0030155: regulation of cell adhesion0.00E+00
5GO:0033614: chloroplast proton-transporting ATP synthase complex assembly0.00E+00
6GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
7GO:0046460: neutral lipid biosynthetic process0.00E+00
8GO:0090071: negative regulation of ribosome biogenesis0.00E+00
9GO:0044249: cellular biosynthetic process0.00E+00
10GO:0031116: positive regulation of microtubule polymerization0.00E+00
11GO:0006167: AMP biosynthetic process0.00E+00
12GO:0042407: cristae formation0.00E+00
13GO:0042817: pyridoxal metabolic process0.00E+00
14GO:0090042: tubulin deacetylation0.00E+00
15GO:0006399: tRNA metabolic process0.00E+00
16GO:0046040: IMP metabolic process0.00E+00
17GO:0009658: chloroplast organization2.52E-09
18GO:0009793: embryo development ending in seed dormancy2.34E-06
19GO:0010020: chloroplast fission4.67E-06
20GO:0042026: protein refolding6.76E-06
21GO:1900871: chloroplast mRNA modification7.13E-06
22GO:0009657: plastid organization2.30E-05
23GO:0045038: protein import into chloroplast thylakoid membrane1.48E-04
24GO:0042793: transcription from plastid promoter2.12E-04
25GO:0006458: 'de novo' protein folding2.85E-04
26GO:0000023: maltose metabolic process3.99E-04
27GO:0010729: positive regulation of hydrogen peroxide biosynthetic process3.99E-04
28GO:0006419: alanyl-tRNA aminoacylation3.99E-04
29GO:0000476: maturation of 4.5S rRNA3.99E-04
30GO:0000967: rRNA 5'-end processing3.99E-04
31GO:2000025: regulation of leaf formation3.99E-04
32GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.99E-04
33GO:0005980: glycogen catabolic process3.99E-04
34GO:0006438: valyl-tRNA aminoacylation3.99E-04
35GO:0042547: cell wall modification involved in multidimensional cell growth3.99E-04
36GO:0019478: D-amino acid catabolic process3.99E-04
37GO:0042371: vitamin K biosynthetic process3.99E-04
38GO:1902458: positive regulation of stomatal opening3.99E-04
39GO:0009790: embryo development4.35E-04
40GO:0006353: DNA-templated transcription, termination4.62E-04
41GO:0019252: starch biosynthetic process6.12E-04
42GO:1900865: chloroplast RNA modification7.98E-04
43GO:1903426: regulation of reactive oxygen species biosynthetic process8.66E-04
44GO:0034470: ncRNA processing8.66E-04
45GO:0010198: synergid death8.66E-04
46GO:0006739: NADP metabolic process8.66E-04
47GO:0009629: response to gravity8.66E-04
48GO:0019388: galactose catabolic process8.66E-04
49GO:0060359: response to ammonium ion8.66E-04
50GO:0007154: cell communication8.66E-04
51GO:0006423: cysteinyl-tRNA aminoacylation8.66E-04
52GO:0006435: threonyl-tRNA aminoacylation8.66E-04
53GO:0044208: 'de novo' AMP biosynthetic process8.66E-04
54GO:0009220: pyrimidine ribonucleotide biosynthetic process8.66E-04
55GO:0010027: thylakoid membrane organization1.06E-03
56GO:0005983: starch catabolic process1.22E-03
57GO:0045037: protein import into chloroplast stroma1.22E-03
58GO:2000012: regulation of auxin polar transport1.38E-03
59GO:0048281: inflorescence morphogenesis1.40E-03
60GO:0006954: inflammatory response1.40E-03
61GO:0015940: pantothenate biosynthetic process1.40E-03
62GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.40E-03
63GO:0001578: microtubule bundle formation1.40E-03
64GO:0043157: response to cation stress1.40E-03
65GO:0005977: glycogen metabolic process1.40E-03
66GO:0071732: cellular response to nitric oxide1.75E-03
67GO:0009102: biotin biosynthetic process2.03E-03
68GO:0051085: chaperone mediated protein folding requiring cofactor2.03E-03
69GO:0009152: purine ribonucleotide biosynthetic process2.03E-03
70GO:0010239: chloroplast mRNA processing2.03E-03
71GO:0008615: pyridoxine biosynthetic process2.03E-03
72GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.03E-03
73GO:0009590: detection of gravity2.03E-03
74GO:0006164: purine nucleotide biosynthetic process2.03E-03
75GO:0010148: transpiration2.03E-03
76GO:0043572: plastid fission2.03E-03
77GO:0016556: mRNA modification2.03E-03
78GO:2001141: regulation of RNA biosynthetic process2.03E-03
79GO:0006418: tRNA aminoacylation for protein translation2.38E-03
80GO:0061077: chaperone-mediated protein folding2.62E-03
81GO:0051781: positive regulation of cell division2.73E-03
82GO:0051322: anaphase2.73E-03
83GO:0022622: root system development2.73E-03
84GO:0006734: NADH metabolic process2.73E-03
85GO:0044205: 'de novo' UMP biosynthetic process2.73E-03
86GO:0007020: microtubule nucleation2.73E-03
87GO:0010021: amylopectin biosynthetic process2.73E-03
88GO:0009409: response to cold2.79E-03
89GO:0006730: one-carbon metabolic process2.87E-03
90GO:0007005: mitochondrion organization2.87E-03
91GO:0071369: cellular response to ethylene stimulus3.13E-03
92GO:0046785: microtubule polymerization3.49E-03
93GO:0032543: mitochondrial translation3.49E-03
94GO:0010236: plastoquinone biosynthetic process3.49E-03
95GO:0009107: lipoate biosynthetic process3.49E-03
96GO:0009664: plant-type cell wall organization3.70E-03
97GO:0009959: negative gravitropism4.32E-03
98GO:0016554: cytidine to uridine editing4.32E-03
99GO:0032973: amino acid export4.32E-03
100GO:0050665: hydrogen peroxide biosynthetic process4.32E-03
101GO:0009648: photoperiodism5.20E-03
102GO:0019509: L-methionine salvage from methylthioadenosine5.20E-03
103GO:0042372: phylloquinone biosynthetic process5.20E-03
104GO:0017148: negative regulation of translation5.20E-03
105GO:0009942: longitudinal axis specification5.20E-03
106GO:0034389: lipid particle organization5.20E-03
107GO:0030488: tRNA methylation5.20E-03
108GO:1901259: chloroplast rRNA processing5.20E-03
109GO:0009854: oxidative photosynthetic carbon pathway5.20E-03
110GO:0009630: gravitropism5.67E-03
111GO:0010583: response to cyclopentenone5.67E-03
112GO:0071281: cellular response to iron ion6.05E-03
113GO:0048528: post-embryonic root development6.15E-03
114GO:0009772: photosynthetic electron transport in photosystem II6.15E-03
115GO:0043090: amino acid import6.15E-03
116GO:0070370: cellular heat acclimation6.15E-03
117GO:0006614: SRP-dependent cotranslational protein targeting to membrane6.15E-03
118GO:0010196: nonphotochemical quenching6.15E-03
119GO:0010444: guard mother cell differentiation6.15E-03
120GO:0006400: tRNA modification6.15E-03
121GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process6.15E-03
122GO:0010103: stomatal complex morphogenesis6.15E-03
123GO:0032880: regulation of protein localization6.15E-03
124GO:0009828: plant-type cell wall loosening6.44E-03
125GO:0048564: photosystem I assembly7.15E-03
126GO:0005978: glycogen biosynthetic process7.15E-03
127GO:2000070: regulation of response to water deprivation7.15E-03
128GO:0070413: trehalose metabolism in response to stress7.15E-03
129GO:0000105: histidine biosynthetic process7.15E-03
130GO:0000910: cytokinesis7.26E-03
131GO:0009932: cell tip growth8.21E-03
132GO:0071482: cellular response to light stimulus8.21E-03
133GO:0001558: regulation of cell growth8.21E-03
134GO:0006526: arginine biosynthetic process8.21E-03
135GO:0010204: defense response signaling pathway, resistance gene-independent8.21E-03
136GO:0032544: plastid translation8.21E-03
137GO:0007389: pattern specification process8.21E-03
138GO:0009627: systemic acquired resistance8.60E-03
139GO:0015995: chlorophyll biosynthetic process9.07E-03
140GO:0015979: photosynthesis9.22E-03
141GO:0080144: amino acid homeostasis9.31E-03
142GO:0006098: pentose-phosphate shunt9.31E-03
143GO:0019432: triglyceride biosynthetic process9.31E-03
144GO:0000373: Group II intron splicing9.31E-03
145GO:0005975: carbohydrate metabolic process1.01E-02
146GO:0043067: regulation of programmed cell death1.05E-02
147GO:0006779: porphyrin-containing compound biosynthetic process1.05E-02
148GO:0009098: leucine biosynthetic process1.05E-02
149GO:0006949: syncytium formation1.17E-02
150GO:0006259: DNA metabolic process1.17E-02
151GO:0006535: cysteine biosynthetic process from serine1.17E-02
152GO:0006413: translational initiation1.17E-02
153GO:0006782: protoporphyrinogen IX biosynthetic process1.17E-02
154GO:0045036: protein targeting to chloroplast1.17E-02
155GO:0010015: root morphogenesis1.29E-02
156GO:0006265: DNA topological change1.29E-02
157GO:0009073: aromatic amino acid family biosynthetic process1.29E-02
158GO:0006352: DNA-templated transcription, initiation1.29E-02
159GO:0006415: translational termination1.29E-02
160GO:0009451: RNA modification1.32E-02
161GO:0006094: gluconeogenesis1.56E-02
162GO:0006006: glucose metabolic process1.56E-02
163GO:0050826: response to freezing1.56E-02
164GO:0010114: response to red light1.65E-02
165GO:0009266: response to temperature stimulus1.70E-02
166GO:0010207: photosystem II assembly1.70E-02
167GO:0090351: seedling development1.84E-02
168GO:0006508: proteolysis1.88E-02
169GO:0006071: glycerol metabolic process1.99E-02
170GO:0000162: tryptophan biosynthetic process1.99E-02
171GO:0019344: cysteine biosynthetic process2.14E-02
172GO:0009116: nucleoside metabolic process2.14E-02
173GO:0009944: polarity specification of adaxial/abaxial axis2.14E-02
174GO:0005992: trehalose biosynthetic process2.14E-02
175GO:0006364: rRNA processing2.23E-02
176GO:0051302: regulation of cell division2.30E-02
177GO:0019953: sexual reproduction2.30E-02
178GO:0016575: histone deacetylation2.30E-02
179GO:0043622: cortical microtubule organization2.30E-02
180GO:0048511: rhythmic process2.46E-02
181GO:0015992: proton transport2.46E-02
182GO:0009814: defense response, incompatible interaction2.63E-02
183GO:0016226: iron-sulfur cluster assembly2.63E-02
184GO:0035428: hexose transmembrane transport2.63E-02
185GO:0031348: negative regulation of defense response2.63E-02
186GO:0048366: leaf development2.73E-02
187GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.79E-02
188GO:0001944: vasculature development2.79E-02
189GO:0009306: protein secretion2.96E-02
190GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.14E-02
191GO:0008284: positive regulation of cell proliferation3.14E-02
192GO:0006606: protein import into nucleus3.32E-02
193GO:0048653: anther development3.32E-02
194GO:0009958: positive gravitropism3.50E-02
195GO:0006662: glycerol ether metabolic process3.50E-02
196GO:0010197: polar nucleus fusion3.50E-02
197GO:0048868: pollen tube development3.50E-02
198GO:0046323: glucose import3.50E-02
199GO:0007059: chromosome segregation3.69E-02
200GO:0042752: regulation of circadian rhythm3.69E-02
201GO:0000302: response to reactive oxygen species4.07E-02
202GO:0002229: defense response to oomycetes4.07E-02
203GO:0055085: transmembrane transport4.51E-02
204GO:0006457: protein folding4.63E-02
205GO:0006464: cellular protein modification process4.66E-02
206GO:0010252: auxin homeostasis4.66E-02
207GO:0071805: potassium ion transmembrane transport4.86E-02
208GO:0006633: fatty acid biosynthetic process4.97E-02
RankGO TermAdjusted P value
1GO:0005048: signal sequence binding0.00E+00
2GO:0004019: adenylosuccinate synthase activity0.00E+00
3GO:0004076: biotin synthase activity0.00E+00
4GO:0003937: IMP cyclohydrolase activity0.00E+00
5GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
6GO:0005363: maltose transmembrane transporter activity0.00E+00
7GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
8GO:0010303: limit dextrinase activity0.00E+00
9GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity0.00E+00
10GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity0.00E+00
11GO:0043014: alpha-tubulin binding0.00E+00
12GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
13GO:0051721: protein phosphatase 2A binding0.00E+00
14GO:0042903: tubulin deacetylase activity0.00E+00
15GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
16GO:0004823: leucine-tRNA ligase activity0.00E+00
17GO:0051060: pullulanase activity0.00E+00
18GO:0015267: channel activity0.00E+00
19GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
20GO:0004358: glutamate N-acetyltransferase activity0.00E+00
21GO:0008237: metallopeptidase activity6.25E-06
22GO:0004326: tetrahydrofolylpolyglutamate synthase activity7.13E-06
23GO:0004176: ATP-dependent peptidase activity1.49E-05
24GO:0005525: GTP binding5.70E-05
25GO:0043621: protein self-association6.31E-05
26GO:0044183: protein binding involved in protein folding6.83E-05
27GO:0004556: alpha-amylase activity2.12E-04
28GO:0004222: metalloendopeptidase activity2.36E-04
29GO:0003723: RNA binding3.24E-04
30GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.99E-04
31GO:0005227: calcium activated cation channel activity3.99E-04
32GO:0004733: pyridoxamine-phosphate oxidase activity3.99E-04
33GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.99E-04
34GO:0008184: glycogen phosphorylase activity3.99E-04
35GO:0004645: phosphorylase activity3.99E-04
36GO:0004813: alanine-tRNA ligase activity3.99E-04
37GO:0004832: valine-tRNA ligase activity3.99E-04
38GO:0052857: NADPHX epimerase activity3.99E-04
39GO:0052856: NADHX epimerase activity3.99E-04
40GO:0009977: proton motive force dependent protein transmembrane transporter activity8.66E-04
41GO:0016415: octanoyltransferase activity8.66E-04
42GO:0004047: aminomethyltransferase activity8.66E-04
43GO:0004817: cysteine-tRNA ligase activity8.66E-04
44GO:0004829: threonine-tRNA ligase activity8.66E-04
45GO:0004614: phosphoglucomutase activity8.66E-04
46GO:0019156: isoamylase activity8.66E-04
47GO:0017118: lipoyltransferase activity8.66E-04
48GO:0003852: 2-isopropylmalate synthase activity8.66E-04
49GO:0003924: GTPase activity9.65E-04
50GO:0046524: sucrose-phosphate synthase activity1.40E-03
51GO:0002161: aminoacyl-tRNA editing activity1.40E-03
52GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity2.03E-03
53GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity2.03E-03
54GO:0019201: nucleotide kinase activity2.03E-03
55GO:0009678: hydrogen-translocating pyrophosphatase activity2.03E-03
56GO:0048487: beta-tubulin binding2.03E-03
57GO:0016149: translation release factor activity, codon specific2.03E-03
58GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity2.03E-03
59GO:0016851: magnesium chelatase activity2.03E-03
60GO:0043023: ribosomal large subunit binding2.03E-03
61GO:0001053: plastid sigma factor activity2.73E-03
62GO:0004045: aminoacyl-tRNA hydrolase activity2.73E-03
63GO:0016987: sigma factor activity2.73E-03
64GO:0019199: transmembrane receptor protein kinase activity2.73E-03
65GO:0042277: peptide binding2.73E-03
66GO:0008891: glycolate oxidase activity2.73E-03
67GO:0004659: prenyltransferase activity2.73E-03
68GO:0030570: pectate lyase activity3.13E-03
69GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.49E-03
70GO:0016773: phosphotransferase activity, alcohol group as acceptor3.49E-03
71GO:0004812: aminoacyl-tRNA ligase activity3.69E-03
72GO:0004519: endonuclease activity4.28E-03
73GO:0080030: methyl indole-3-acetate esterase activity4.32E-03
74GO:0004332: fructose-bisphosphate aldolase activity4.32E-03
75GO:0010181: FMN binding4.62E-03
76GO:0004124: cysteine synthase activity5.20E-03
77GO:0004017: adenylate kinase activity5.20E-03
78GO:0004144: diacylglycerol O-acyltransferase activity5.20E-03
79GO:0004427: inorganic diphosphatase activity6.15E-03
80GO:0051082: unfolded protein binding6.36E-03
81GO:0005337: nucleoside transmembrane transporter activity7.15E-03
82GO:0008312: 7S RNA binding7.15E-03
83GO:0043022: ribosome binding7.15E-03
84GO:0016597: amino acid binding7.26E-03
85GO:0016887: ATPase activity7.94E-03
86GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)8.21E-03
87GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity8.21E-03
88GO:0019843: rRNA binding8.47E-03
89GO:0003747: translation release factor activity9.31E-03
90GO:0016829: lyase activity9.37E-03
91GO:0009672: auxin:proton symporter activity1.05E-02
92GO:0004805: trehalose-phosphatase activity1.17E-02
93GO:0003746: translation elongation factor activity1.28E-02
94GO:0000049: tRNA binding1.43E-02
95GO:0004565: beta-galactosidase activity1.56E-02
96GO:0003743: translation initiation factor activity1.56E-02
97GO:0010329: auxin efflux transmembrane transporter activity1.56E-02
98GO:0008083: growth factor activity1.70E-02
99GO:0004535: poly(A)-specific ribonuclease activity1.70E-02
100GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.70E-02
101GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.99E-02
102GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.99E-02
103GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.99E-02
104GO:0003887: DNA-directed DNA polymerase activity1.99E-02
105GO:0004407: histone deacetylase activity2.14E-02
106GO:0005528: FK506 binding2.14E-02
107GO:0051536: iron-sulfur cluster binding2.14E-02
108GO:0000287: magnesium ion binding2.17E-02
109GO:0016788: hydrolase activity, acting on ester bonds2.28E-02
110GO:0015079: potassium ion transmembrane transporter activity2.30E-02
111GO:0008408: 3'-5' exonuclease activity2.46E-02
112GO:0022891: substrate-specific transmembrane transporter activity2.79E-02
113GO:0047134: protein-disulfide reductase activity3.14E-02
114GO:0004527: exonuclease activity3.50E-02
115GO:0004791: thioredoxin-disulfide reductase activity3.69E-02
116GO:0016853: isomerase activity3.69E-02
117GO:0005355: glucose transmembrane transporter activity3.69E-02
118GO:0030170: pyridoxal phosphate binding4.40E-02
119GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.46E-02
120GO:0003684: damaged DNA binding4.66E-02
121GO:0016791: phosphatase activity4.66E-02
122GO:0008565: protein transporter activity4.74E-02
123GO:0008483: transaminase activity4.86E-02
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Gene type



Gene DE type