Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G30790

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010412: mannan metabolic process0.00E+00
2GO:0071311: cellular response to acetate0.00E+00
3GO:0015843: methylammonium transport0.00E+00
4GO:0070979: protein K11-linked ubiquitination0.00E+00
5GO:0071260: cellular response to mechanical stimulus0.00E+00
6GO:0043488: regulation of mRNA stability0.00E+00
7GO:0061157: mRNA destabilization0.00E+00
8GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
9GO:0090706: specification of plant organ position0.00E+00
10GO:0031116: positive regulation of microtubule polymerization0.00E+00
11GO:0010068: protoderm histogenesis0.00E+00
12GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
13GO:0007638: mechanosensory behavior0.00E+00
14GO:2001294: malonyl-CoA catabolic process0.00E+00
15GO:0015739: sialic acid transport0.00E+00
16GO:0009733: response to auxin1.40E-07
17GO:0009734: auxin-activated signaling pathway2.59E-06
18GO:0040008: regulation of growth1.69E-05
19GO:0046620: regulation of organ growth5.86E-05
20GO:0010158: abaxial cell fate specification3.45E-04
21GO:0009903: chloroplast avoidance movement6.36E-04
22GO:0030488: tRNA methylation6.36E-04
23GO:0034080: CENP-A containing nucleosome assembly6.81E-04
24GO:0000066: mitochondrial ornithine transport6.81E-04
25GO:0006177: GMP biosynthetic process6.81E-04
26GO:0010450: inflorescence meristem growth6.81E-04
27GO:0051418: microtubule nucleation by microtubule organizing center6.81E-04
28GO:0051171: regulation of nitrogen compound metabolic process6.81E-04
29GO:0071028: nuclear mRNA surveillance6.81E-04
30GO:1902265: abscisic acid homeostasis6.81E-04
31GO:0043266: regulation of potassium ion transport6.81E-04
32GO:0006659: phosphatidylserine biosynthetic process6.81E-04
33GO:0043087: regulation of GTPase activity6.81E-04
34GO:2000021: regulation of ion homeostasis6.81E-04
35GO:0006264: mitochondrial DNA replication6.81E-04
36GO:0033259: plastid DNA replication6.81E-04
37GO:0010182: sugar mediated signaling pathway1.40E-03
38GO:0009658: chloroplast organization1.46E-03
39GO:0031125: rRNA 3'-end processing1.47E-03
40GO:0015804: neutral amino acid transport1.47E-03
41GO:0071051: polyadenylation-dependent snoRNA 3'-end processing1.47E-03
42GO:0010115: regulation of abscisic acid biosynthetic process1.47E-03
43GO:1900871: chloroplast mRNA modification1.47E-03
44GO:0034475: U4 snRNA 3'-end processing1.47E-03
45GO:0033566: gamma-tubulin complex localization1.47E-03
46GO:0007154: cell communication1.47E-03
47GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation1.47E-03
48GO:1900033: negative regulation of trichome patterning1.47E-03
49GO:0000373: Group II intron splicing1.47E-03
50GO:0006423: cysteinyl-tRNA aminoacylation1.47E-03
51GO:0031648: protein destabilization1.47E-03
52GO:0007275: multicellular organism development1.56E-03
53GO:0009638: phototropism1.74E-03
54GO:1900865: chloroplast RNA modification1.74E-03
55GO:0006816: calcium ion transport2.36E-03
56GO:0071398: cellular response to fatty acid2.43E-03
57GO:0045165: cell fate commitment2.43E-03
58GO:0007052: mitotic spindle organization2.43E-03
59GO:0016075: rRNA catabolic process2.43E-03
60GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'2.43E-03
61GO:0031022: nuclear migration along microfilament2.43E-03
62GO:0051127: positive regulation of actin nucleation2.43E-03
63GO:1902448: positive regulation of shade avoidance2.43E-03
64GO:0019419: sulfate reduction2.43E-03
65GO:0071230: cellular response to amino acid stimulus2.43E-03
66GO:0031145: anaphase-promoting complex-dependent catabolic process2.43E-03
67GO:0009150: purine ribonucleotide metabolic process2.43E-03
68GO:0006753: nucleoside phosphate metabolic process2.43E-03
69GO:0001578: microtubule bundle formation2.43E-03
70GO:0045493: xylan catabolic process2.43E-03
71GO:0006760: folic acid-containing compound metabolic process2.43E-03
72GO:2000012: regulation of auxin polar transport3.08E-03
73GO:0007166: cell surface receptor signaling pathway3.13E-03
74GO:0010020: chloroplast fission3.48E-03
75GO:0034508: centromere complex assembly3.53E-03
76GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.53E-03
77GO:0006166: purine ribonucleoside salvage3.53E-03
78GO:0007231: osmosensory signaling pathway3.53E-03
79GO:0030071: regulation of mitotic metaphase/anaphase transition3.53E-03
80GO:0051639: actin filament network formation3.53E-03
81GO:0009226: nucleotide-sugar biosynthetic process3.53E-03
82GO:0048645: animal organ formation3.53E-03
83GO:0044211: CTP salvage3.53E-03
84GO:0010255: glucose mediated signaling pathway3.53E-03
85GO:0015696: ammonium transport3.53E-03
86GO:0032981: mitochondrial respiratory chain complex I assembly3.53E-03
87GO:2000904: regulation of starch metabolic process3.53E-03
88GO:0090307: mitotic spindle assembly3.53E-03
89GO:0006168: adenine salvage3.53E-03
90GO:0006164: purine nucleotide biosynthetic process3.53E-03
91GO:0043572: plastid fission3.53E-03
92GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center3.53E-03
93GO:0009740: gibberellic acid mediated signaling pathway3.82E-03
94GO:0048629: trichome patterning4.76E-03
95GO:0051764: actin crosslink formation4.76E-03
96GO:0051322: anaphase4.76E-03
97GO:0033500: carbohydrate homeostasis4.76E-03
98GO:0046656: folic acid biosynthetic process4.76E-03
99GO:0046355: mannan catabolic process4.76E-03
100GO:0072488: ammonium transmembrane transport4.76E-03
101GO:0022622: root system development4.76E-03
102GO:0006021: inositol biosynthetic process4.76E-03
103GO:0007020: microtubule nucleation4.76E-03
104GO:0009902: chloroplast relocation4.76E-03
105GO:0044206: UMP salvage4.76E-03
106GO:0009165: nucleotide biosynthetic process4.76E-03
107GO:0005992: trehalose biosynthetic process4.84E-03
108GO:0019344: cysteine biosynthetic process4.84E-03
109GO:0010187: negative regulation of seed germination4.84E-03
110GO:1902183: regulation of shoot apical meristem development6.12E-03
111GO:0044209: AMP salvage6.12E-03
112GO:0046785: microtubule polymerization6.12E-03
113GO:0032876: negative regulation of DNA endoreduplication6.12E-03
114GO:0009904: chloroplast accumulation movement6.12E-03
115GO:0045038: protein import into chloroplast thylakoid membrane6.12E-03
116GO:2000022: regulation of jasmonic acid mediated signaling pathway6.46E-03
117GO:0006839: mitochondrial transport6.67E-03
118GO:0009686: gibberellin biosynthetic process7.05E-03
119GO:0010405: arabinogalactan protein metabolic process7.60E-03
120GO:0010264: myo-inositol hexakisphosphate biosynthetic process7.60E-03
121GO:0009959: negative gravitropism7.60E-03
122GO:0006655: phosphatidylglycerol biosynthetic process7.60E-03
123GO:0006139: nucleobase-containing compound metabolic process7.60E-03
124GO:0016554: cytidine to uridine editing7.60E-03
125GO:0009920: cell plate formation involved in plant-type cell wall biogenesis7.60E-03
126GO:0009117: nucleotide metabolic process7.60E-03
127GO:0006206: pyrimidine nucleobase metabolic process7.60E-03
128GO:0032973: amino acid export7.60E-03
129GO:0018258: protein O-linked glycosylation via hydroxyproline7.60E-03
130GO:0000741: karyogamy7.60E-03
131GO:0006561: proline biosynthetic process7.60E-03
132GO:0009926: auxin polar transport7.81E-03
133GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.27E-03
134GO:0009789: positive regulation of abscisic acid-activated signaling pathway8.33E-03
135GO:0010087: phloem or xylem histogenesis9.02E-03
136GO:0080086: stamen filament development9.20E-03
137GO:0009648: photoperiodism9.20E-03
138GO:0042372: phylloquinone biosynthetic process9.20E-03
139GO:0048280: vesicle fusion with Golgi apparatus9.20E-03
140GO:0046654: tetrahydrofolate biosynthetic process9.20E-03
141GO:2000033: regulation of seed dormancy process9.20E-03
142GO:0009958: positive gravitropism9.73E-03
143GO:0032880: regulation of protein localization1.09E-02
144GO:0010161: red light signaling pathway1.09E-02
145GO:0009610: response to symbiotic fungus1.09E-02
146GO:0048528: post-embryonic root development1.09E-02
147GO:0043090: amino acid import1.09E-02
148GO:0015937: coenzyme A biosynthetic process1.09E-02
149GO:0010050: vegetative phase change1.09E-02
150GO:0006400: tRNA modification1.09E-02
151GO:0030307: positive regulation of cell growth1.09E-02
152GO:0009585: red, far-red light phototransduction1.15E-02
153GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.21E-02
154GO:0009850: auxin metabolic process1.27E-02
155GO:0009690: cytokinin metabolic process1.27E-02
156GO:0009787: regulation of abscisic acid-activated signaling pathway1.27E-02
157GO:0010078: maintenance of root meristem identity1.27E-02
158GO:0009704: de-etiolation1.27E-02
159GO:0032875: regulation of DNA endoreduplication1.27E-02
160GO:0042255: ribosome assembly1.27E-02
161GO:0006353: DNA-templated transcription, termination1.27E-02
162GO:0070413: trehalose metabolism in response to stress1.27E-02
163GO:0006468: protein phosphorylation1.36E-02
164GO:1901657: glycosyl compound metabolic process1.38E-02
165GO:0043562: cellular response to nitrogen levels1.46E-02
166GO:0010093: specification of floral organ identity1.46E-02
167GO:0010099: regulation of photomorphogenesis1.46E-02
168GO:0006002: fructose 6-phosphate metabolic process1.46E-02
169GO:0010100: negative regulation of photomorphogenesis1.46E-02
170GO:0006997: nucleus organization1.46E-02
171GO:0009828: plant-type cell wall loosening1.47E-02
172GO:0048367: shoot system development1.48E-02
173GO:0015780: nucleotide-sugar transport1.66E-02
174GO:0051865: protein autoubiquitination1.66E-02
175GO:0080144: amino acid homeostasis1.66E-02
176GO:0009051: pentose-phosphate shunt, oxidative branch1.66E-02
177GO:2000024: regulation of leaf development1.66E-02
178GO:0006783: heme biosynthetic process1.66E-02
179GO:0006189: 'de novo' IMP biosynthetic process1.66E-02
180GO:0010029: regulation of seed germination1.86E-02
181GO:0071577: zinc II ion transmembrane transport1.87E-02
182GO:0042761: very long-chain fatty acid biosynthetic process1.87E-02
183GO:0000387: spliceosomal snRNP assembly1.87E-02
184GO:0010018: far-red light signaling pathway1.87E-02
185GO:0010380: regulation of chlorophyll biosynthetic process1.87E-02
186GO:0031425: chloroplast RNA processing1.87E-02
187GO:0009742: brassinosteroid mediated signaling pathway1.94E-02
188GO:0009627: systemic acquired resistance1.96E-02
189GO:0045036: protein targeting to chloroplast2.09E-02
190GO:0006949: syncytium formation2.09E-02
191GO:0009299: mRNA transcription2.09E-02
192GO:0010162: seed dormancy process2.09E-02
193GO:0006535: cysteine biosynthetic process from serine2.09E-02
194GO:0006896: Golgi to vacuole transport2.09E-02
195GO:0000103: sulfate assimilation2.09E-02
196GO:0009688: abscisic acid biosynthetic process2.09E-02
197GO:0009684: indoleacetic acid biosynthetic process2.32E-02
198GO:0009773: photosynthetic electron transport in photosystem I2.32E-02
199GO:1903507: negative regulation of nucleic acid-templated transcription2.32E-02
200GO:0009750: response to fructose2.32E-02
201GO:0006415: translational termination2.32E-02
202GO:0071555: cell wall organization2.34E-02
203GO:0006790: sulfur compound metabolic process2.56E-02
204GO:0016024: CDP-diacylglycerol biosynthetic process2.56E-02
205GO:0010582: floral meristem determinacy2.56E-02
206GO:0048527: lateral root development2.65E-02
207GO:0006865: amino acid transport2.78E-02
208GO:0030036: actin cytoskeleton organization2.80E-02
209GO:0009725: response to hormone2.80E-02
210GO:0030048: actin filament-based movement2.80E-02
211GO:0010588: cotyledon vascular tissue pattern formation2.80E-02
212GO:0010628: positive regulation of gene expression2.80E-02
213GO:0006006: glucose metabolic process2.80E-02
214GO:0009785: blue light signaling pathway2.80E-02
215GO:0009637: response to blue light2.91E-02
216GO:0048467: gynoecium development3.05E-02
217GO:0009933: meristem structural organization3.05E-02
218GO:0090351: seedling development3.31E-02
219GO:0010030: positive regulation of seed germination3.31E-02
220GO:0070588: calcium ion transmembrane transport3.31E-02
221GO:0016310: phosphorylation3.34E-02
222GO:0006631: fatty acid metabolic process3.46E-02
223GO:0007623: circadian rhythm3.58E-02
224GO:0010025: wax biosynthetic process3.58E-02
225GO:0042753: positive regulation of circadian rhythm3.58E-02
226GO:0009833: plant-type primary cell wall biogenesis3.58E-02
227GO:0008283: cell proliferation3.75E-02
228GO:0009944: polarity specification of adaxial/abaxial axis3.85E-02
229GO:0051017: actin filament bundle assembly3.85E-02
230GO:0030150: protein import into mitochondrial matrix3.85E-02
231GO:0007010: cytoskeleton organization3.85E-02
232GO:0006418: tRNA aminoacylation for protein translation4.13E-02
233GO:0006874: cellular calcium ion homeostasis4.13E-02
234GO:0043622: cortical microtubule organization4.13E-02
235GO:0016042: lipid catabolic process4.36E-02
236GO:0006855: drug transmembrane transport4.37E-02
237GO:0003333: amino acid transmembrane transport4.42E-02
238GO:0035428: hexose transmembrane transport4.71E-02
239GO:0006730: one-carbon metabolic process4.71E-02
240GO:0031348: negative regulation of defense response4.71E-02
RankGO TermAdjusted P value
1GO:1990534: thermospermine oxidase activity0.00E+00
2GO:0019136: deoxynucleoside kinase activity0.00E+00
3GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity0.00E+00
4GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
5GO:0015136: sialic acid transmembrane transporter activity0.00E+00
6GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
7GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity0.00E+00
8GO:0010301: xanthoxin dehydrogenase activity0.00E+00
9GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
10GO:0015276: ligand-gated ion channel activity0.00E+00
11GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
12GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.29E-04
13GO:0050139: nicotinate-N-glucosyltransferase activity6.81E-04
14GO:0010945: CoA pyrophosphatase activity6.81E-04
15GO:0051777: ent-kaurenoate oxidase activity6.81E-04
16GO:0008066: glutamate receptor activity6.81E-04
17GO:0005290: L-histidine transmembrane transporter activity6.81E-04
18GO:0010313: phytochrome binding6.81E-04
19GO:0043425: bHLH transcription factor binding1.47E-03
20GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity1.47E-03
21GO:0033741: adenylyl-sulfate reductase (glutathione) activity1.47E-03
22GO:0003938: IMP dehydrogenase activity1.47E-03
23GO:0102083: 7,8-dihydromonapterin aldolase activity1.47E-03
24GO:0009973: adenylyl-sulfate reductase activity1.47E-03
25GO:0004817: cysteine-tRNA ligase activity1.47E-03
26GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.47E-03
27GO:0080097: L-tryptophan:pyruvate aminotransferase activity1.47E-03
28GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity1.47E-03
29GO:0004150: dihydroneopterin aldolase activity1.47E-03
30GO:0000064: L-ornithine transmembrane transporter activity1.47E-03
31GO:0015172: acidic amino acid transmembrane transporter activity1.47E-03
32GO:0004512: inositol-3-phosphate synthase activity1.47E-03
33GO:0050017: L-3-cyanoalanine synthase activity1.47E-03
34GO:0017118: lipoyltransferase activity1.47E-03
35GO:0043621: protein self-association1.73E-03
36GO:0004805: trehalose-phosphatase activity2.04E-03
37GO:0052692: raffinose alpha-galactosidase activity2.43E-03
38GO:0070330: aromatase activity2.43E-03
39GO:0004557: alpha-galactosidase activity2.43E-03
40GO:0005262: calcium channel activity3.08E-03
41GO:0004022: alcohol dehydrogenase (NAD) activity3.08E-03
42GO:0015189: L-lysine transmembrane transporter activity3.53E-03
43GO:0035529: NADH pyrophosphatase activity3.53E-03
44GO:0000254: C-4 methylsterol oxidase activity3.53E-03
45GO:0003999: adenine phosphoribosyltransferase activity3.53E-03
46GO:0015175: neutral amino acid transmembrane transporter activity3.53E-03
47GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity3.53E-03
48GO:0017172: cysteine dioxygenase activity3.53E-03
49GO:0015181: arginine transmembrane transporter activity3.53E-03
50GO:0047627: adenylylsulfatase activity3.53E-03
51GO:0004845: uracil phosphoribosyltransferase activity4.76E-03
52GO:0004345: glucose-6-phosphate dehydrogenase activity4.76E-03
53GO:0008409: 5'-3' exonuclease activity4.76E-03
54GO:0016985: mannan endo-1,4-beta-mannosidase activity4.76E-03
55GO:0080032: methyl jasmonate esterase activity4.76E-03
56GO:0009044: xylan 1,4-beta-xylosidase activity4.76E-03
57GO:0043015: gamma-tubulin binding4.76E-03
58GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity4.76E-03
59GO:0046556: alpha-L-arabinofuranosidase activity4.76E-03
60GO:0016788: hydrolase activity, acting on ester bonds5.52E-03
61GO:0016846: carbon-sulfur lyase activity6.12E-03
62GO:0018685: alkane 1-monooxygenase activity6.12E-03
63GO:0016773: phosphotransferase activity, alcohol group as acceptor6.12E-03
64GO:0030570: pectate lyase activity7.05E-03
65GO:0008519: ammonium transmembrane transporter activity7.60E-03
66GO:1990714: hydroxyproline O-galactosyltransferase activity7.60E-03
67GO:0004709: MAP kinase kinase kinase activity7.60E-03
68GO:0000210: NAD+ diphosphatase activity7.60E-03
69GO:0016208: AMP binding7.60E-03
70GO:0016462: pyrophosphatase activity7.60E-03
71GO:0042578: phosphoric ester hydrolase activity7.60E-03
72GO:0003727: single-stranded RNA binding7.68E-03
73GO:0004124: cysteine synthase activity9.20E-03
74GO:0004849: uridine kinase activity9.20E-03
75GO:0003730: mRNA 3'-UTR binding9.20E-03
76GO:0004723: calcium-dependent protein serine/threonine phosphatase activity9.20E-03
77GO:0052689: carboxylic ester hydrolase activity9.28E-03
78GO:0008536: Ran GTPase binding9.73E-03
79GO:0008017: microtubule binding1.04E-02
80GO:0005338: nucleotide-sugar transmembrane transporter activity1.09E-02
81GO:0019899: enzyme binding1.09E-02
82GO:0003872: 6-phosphofructokinase activity1.09E-02
83GO:0016301: kinase activity1.13E-02
84GO:0015171: amino acid transmembrane transporter activity1.31E-02
85GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.66E-02
86GO:0003747: translation release factor activity1.66E-02
87GO:0102483: scopolin beta-glucosidase activity2.07E-02
88GO:0004672: protein kinase activity2.27E-02
89GO:0008327: methyl-CpG binding2.32E-02
90GO:0008794: arsenate reductase (glutaredoxin) activity2.32E-02
91GO:0015238: drug transmembrane transporter activity2.41E-02
92GO:0000976: transcription regulatory region sequence-specific DNA binding2.56E-02
93GO:0016829: lyase activity2.64E-02
94GO:0004089: carbonate dehydratase activity2.80E-02
95GO:0031072: heat shock protein binding2.80E-02
96GO:0003725: double-stranded RNA binding2.80E-02
97GO:0000175: 3'-5'-exoribonuclease activity2.80E-02
98GO:0015266: protein channel activity2.80E-02
99GO:0008083: growth factor activity3.05E-02
100GO:0008131: primary amine oxidase activity3.05E-02
101GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.05E-02
102GO:0008422: beta-glucosidase activity3.18E-02
103GO:0004970: ionotropic glutamate receptor activity3.31E-02
104GO:0005217: intracellular ligand-gated ion channel activity3.31E-02
105GO:0046872: metal ion binding3.44E-02
106GO:0005351: sugar:proton symporter activity3.47E-02
107GO:0003887: DNA-directed DNA polymerase activity3.58E-02
108GO:0004871: signal transducer activity3.60E-02
109GO:0031418: L-ascorbic acid binding3.85E-02
110GO:0005385: zinc ion transmembrane transporter activity3.85E-02
111GO:0005528: FK506 binding3.85E-02
112GO:0003714: transcription corepressor activity3.85E-02
113GO:0008324: cation transmembrane transporter activity4.13E-02
114GO:0005515: protein binding4.38E-02
115GO:0019706: protein-cysteine S-palmitoyltransferase activity4.42E-02
116GO:0008408: 3'-5' exonuclease activity4.42E-02
117GO:0004176: ATP-dependent peptidase activity4.42E-02
118GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.71E-02
119GO:0042802: identical protein binding4.80E-02
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Gene type



Gene DE type