GO Enrichment Analysis of Co-expressed Genes with
AT2G30460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 5 | GO:0006021: inositol biosynthetic process | 1.84E-05 |
| 6 | GO:0046855: inositol phosphate dephosphorylation | 4.48E-05 |
| 7 | GO:0016559: peroxisome fission | 1.08E-04 |
| 8 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 1.52E-04 |
| 9 | GO:0071277: cellular response to calcium ion | 1.52E-04 |
| 10 | GO:0046467: membrane lipid biosynthetic process | 1.52E-04 |
| 11 | GO:0031426: polycistronic mRNA processing | 1.52E-04 |
| 12 | GO:0000481: maturation of 5S rRNA | 1.52E-04 |
| 13 | GO:0043686: co-translational protein modification | 1.52E-04 |
| 14 | GO:0071461: cellular response to redox state | 1.52E-04 |
| 15 | GO:0043007: maintenance of rDNA | 1.52E-04 |
| 16 | GO:1902458: positive regulation of stomatal opening | 1.52E-04 |
| 17 | GO:0034337: RNA folding | 1.52E-04 |
| 18 | GO:0010362: negative regulation of anion channel activity by blue light | 1.52E-04 |
| 19 | GO:0015969: guanosine tetraphosphate metabolic process | 1.52E-04 |
| 20 | GO:0044550: secondary metabolite biosynthetic process | 1.69E-04 |
| 21 | GO:0006790: sulfur compound metabolic process | 3.17E-04 |
| 22 | GO:0080005: photosystem stoichiometry adjustment | 3.47E-04 |
| 23 | GO:0010541: acropetal auxin transport | 3.47E-04 |
| 24 | GO:0016122: xanthophyll metabolic process | 3.47E-04 |
| 25 | GO:0010155: regulation of proton transport | 3.47E-04 |
| 26 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.47E-04 |
| 27 | GO:0010143: cutin biosynthetic process | 4.07E-04 |
| 28 | GO:0046854: phosphatidylinositol phosphorylation | 4.57E-04 |
| 29 | GO:0010160: formation of animal organ boundary | 5.68E-04 |
| 30 | GO:0044375: regulation of peroxisome size | 5.68E-04 |
| 31 | GO:2001141: regulation of RNA biosynthetic process | 8.13E-04 |
| 32 | GO:0006020: inositol metabolic process | 8.13E-04 |
| 33 | GO:0009152: purine ribonucleotide biosynthetic process | 8.13E-04 |
| 34 | GO:0046653: tetrahydrofolate metabolic process | 8.13E-04 |
| 35 | GO:0010239: chloroplast mRNA processing | 8.13E-04 |
| 36 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 8.13E-04 |
| 37 | GO:0010117: photoprotection | 1.36E-03 |
| 38 | GO:0009904: chloroplast accumulation movement | 1.36E-03 |
| 39 | GO:0010236: plastoquinone biosynthetic process | 1.36E-03 |
| 40 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.36E-03 |
| 41 | GO:0031365: N-terminal protein amino acid modification | 1.36E-03 |
| 42 | GO:0006465: signal peptide processing | 1.36E-03 |
| 43 | GO:0032259: methylation | 1.51E-03 |
| 44 | GO:0060918: auxin transport | 1.67E-03 |
| 45 | GO:0006633: fatty acid biosynthetic process | 1.91E-03 |
| 46 | GO:0000054: ribosomal subunit export from nucleus | 2.01E-03 |
| 47 | GO:0017148: negative regulation of translation | 2.01E-03 |
| 48 | GO:0009903: chloroplast avoidance movement | 2.01E-03 |
| 49 | GO:0007623: circadian rhythm | 2.15E-03 |
| 50 | GO:0015995: chlorophyll biosynthetic process | 2.26E-03 |
| 51 | GO:1900056: negative regulation of leaf senescence | 2.36E-03 |
| 52 | GO:0042255: ribosome assembly | 2.73E-03 |
| 53 | GO:0006353: DNA-templated transcription, termination | 2.73E-03 |
| 54 | GO:0009704: de-etiolation | 2.73E-03 |
| 55 | GO:0032508: DNA duplex unwinding | 2.73E-03 |
| 56 | GO:2000070: regulation of response to water deprivation | 2.73E-03 |
| 57 | GO:0009231: riboflavin biosynthetic process | 2.73E-03 |
| 58 | GO:0007155: cell adhesion | 2.73E-03 |
| 59 | GO:0055114: oxidation-reduction process | 3.02E-03 |
| 60 | GO:0007186: G-protein coupled receptor signaling pathway | 3.12E-03 |
| 61 | GO:0009657: plastid organization | 3.12E-03 |
| 62 | GO:0009932: cell tip growth | 3.12E-03 |
| 63 | GO:0071482: cellular response to light stimulus | 3.12E-03 |
| 64 | GO:0015996: chlorophyll catabolic process | 3.12E-03 |
| 65 | GO:0009637: response to blue light | 3.15E-03 |
| 66 | GO:0048507: meristem development | 3.53E-03 |
| 67 | GO:0090333: regulation of stomatal closure | 3.53E-03 |
| 68 | GO:0009658: chloroplast organization | 3.74E-03 |
| 69 | GO:0006631: fatty acid metabolic process | 3.74E-03 |
| 70 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.96E-03 |
| 71 | GO:0009638: phototropism | 3.96E-03 |
| 72 | GO:0006535: cysteine biosynthetic process from serine | 4.40E-03 |
| 73 | GO:0009688: abscisic acid biosynthetic process | 4.40E-03 |
| 74 | GO:0043069: negative regulation of programmed cell death | 4.40E-03 |
| 75 | GO:0009641: shade avoidance | 4.40E-03 |
| 76 | GO:0006415: translational termination | 4.86E-03 |
| 77 | GO:0006352: DNA-templated transcription, initiation | 4.86E-03 |
| 78 | GO:0045037: protein import into chloroplast stroma | 5.34E-03 |
| 79 | GO:0008361: regulation of cell size | 5.34E-03 |
| 80 | GO:0009785: blue light signaling pathway | 5.83E-03 |
| 81 | GO:0030048: actin filament-based movement | 5.83E-03 |
| 82 | GO:0018107: peptidyl-threonine phosphorylation | 5.83E-03 |
| 83 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.83E-03 |
| 84 | GO:0009725: response to hormone | 5.83E-03 |
| 85 | GO:0006857: oligopeptide transport | 5.84E-03 |
| 86 | GO:0010020: chloroplast fission | 6.33E-03 |
| 87 | GO:0010207: photosystem II assembly | 6.33E-03 |
| 88 | GO:0010223: secondary shoot formation | 6.33E-03 |
| 89 | GO:0010540: basipetal auxin transport | 6.33E-03 |
| 90 | GO:0009266: response to temperature stimulus | 6.33E-03 |
| 91 | GO:0034605: cellular response to heat | 6.33E-03 |
| 92 | GO:0019853: L-ascorbic acid biosynthetic process | 6.86E-03 |
| 93 | GO:0007031: peroxisome organization | 6.86E-03 |
| 94 | GO:0042343: indole glucosinolate metabolic process | 6.86E-03 |
| 95 | GO:0010025: wax biosynthetic process | 7.40E-03 |
| 96 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.40E-03 |
| 97 | GO:0019762: glucosinolate catabolic process | 7.40E-03 |
| 98 | GO:0019344: cysteine biosynthetic process | 7.95E-03 |
| 99 | GO:0006306: DNA methylation | 9.10E-03 |
| 100 | GO:0098542: defense response to other organism | 9.10E-03 |
| 101 | GO:0061077: chaperone-mediated protein folding | 9.10E-03 |
| 102 | GO:0019748: secondary metabolic process | 9.69E-03 |
| 103 | GO:0071369: cellular response to ethylene stimulus | 1.03E-02 |
| 104 | GO:0019722: calcium-mediated signaling | 1.09E-02 |
| 105 | GO:0006817: phosphate ion transport | 1.09E-02 |
| 106 | GO:0009306: protein secretion | 1.09E-02 |
| 107 | GO:0048443: stamen development | 1.09E-02 |
| 108 | GO:0009958: positive gravitropism | 1.29E-02 |
| 109 | GO:0010182: sugar mediated signaling pathway | 1.29E-02 |
| 110 | GO:0009791: post-embryonic development | 1.42E-02 |
| 111 | GO:0032502: developmental process | 1.57E-02 |
| 112 | GO:0009639: response to red or far red light | 1.71E-02 |
| 113 | GO:0007267: cell-cell signaling | 1.79E-02 |
| 114 | GO:0010027: thylakoid membrane organization | 1.94E-02 |
| 115 | GO:0045893: positive regulation of transcription, DNA-templated | 1.99E-02 |
| 116 | GO:0006810: transport | 2.00E-02 |
| 117 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.02E-02 |
| 118 | GO:0010411: xyloglucan metabolic process | 2.18E-02 |
| 119 | GO:0016311: dephosphorylation | 2.26E-02 |
| 120 | GO:0018298: protein-chromophore linkage | 2.34E-02 |
| 121 | GO:0010311: lateral root formation | 2.43E-02 |
| 122 | GO:0000160: phosphorelay signal transduction system | 2.43E-02 |
| 123 | GO:0009407: toxin catabolic process | 2.51E-02 |
| 124 | GO:0010218: response to far red light | 2.51E-02 |
| 125 | GO:0048527: lateral root development | 2.60E-02 |
| 126 | GO:0010119: regulation of stomatal movement | 2.60E-02 |
| 127 | GO:0007568: aging | 2.60E-02 |
| 128 | GO:0009910: negative regulation of flower development | 2.60E-02 |
| 129 | GO:0009853: photorespiration | 2.78E-02 |
| 130 | GO:0034599: cellular response to oxidative stress | 2.86E-02 |
| 131 | GO:0015979: photosynthesis | 2.95E-02 |
| 132 | GO:0009640: photomorphogenesis | 3.32E-02 |
| 133 | GO:0010114: response to red light | 3.32E-02 |
| 134 | GO:0009926: auxin polar transport | 3.32E-02 |
| 135 | GO:0009744: response to sucrose | 3.32E-02 |
| 136 | GO:0042546: cell wall biogenesis | 3.42E-02 |
| 137 | GO:0009636: response to toxic substance | 3.61E-02 |
| 138 | GO:0016042: lipid catabolic process | 3.71E-02 |
| 139 | GO:0006417: regulation of translation | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.13E-06 |
| 5 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.13E-06 |
| 6 | GO:0018708: thiol S-methyltransferase activity | 1.13E-06 |
| 7 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.13E-06 |
| 8 | GO:0048027: mRNA 5'-UTR binding | 9.86E-06 |
| 9 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.27E-05 |
| 10 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.52E-04 |
| 11 | GO:0042586: peptide deformylase activity | 1.52E-04 |
| 12 | GO:0010313: phytochrome binding | 1.52E-04 |
| 13 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.52E-04 |
| 14 | GO:0004328: formamidase activity | 1.52E-04 |
| 15 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.52E-04 |
| 16 | GO:0035671: enone reductase activity | 1.52E-04 |
| 17 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.52E-04 |
| 18 | GO:0005506: iron ion binding | 1.61E-04 |
| 19 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.37E-04 |
| 20 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 3.47E-04 |
| 21 | GO:0008728: GTP diphosphokinase activity | 3.47E-04 |
| 22 | GO:0050017: L-3-cyanoalanine synthase activity | 3.47E-04 |
| 23 | GO:0042389: omega-3 fatty acid desaturase activity | 3.47E-04 |
| 24 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 3.47E-04 |
| 25 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 3.47E-04 |
| 26 | GO:0043024: ribosomal small subunit binding | 3.47E-04 |
| 27 | GO:0004565: beta-galactosidase activity | 3.61E-04 |
| 28 | GO:0050734: hydroxycinnamoyltransferase activity | 5.68E-04 |
| 29 | GO:0003935: GTP cyclohydrolase II activity | 5.68E-04 |
| 30 | GO:0030267: glyoxylate reductase (NADP) activity | 5.68E-04 |
| 31 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 5.68E-04 |
| 32 | GO:0008864: formyltetrahydrofolate deformylase activity | 5.68E-04 |
| 33 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 8.13E-04 |
| 34 | GO:0009882: blue light photoreceptor activity | 8.13E-04 |
| 35 | GO:0003727: single-stranded RNA binding | 8.75E-04 |
| 36 | GO:0001053: plastid sigma factor activity | 1.08E-03 |
| 37 | GO:0016987: sigma factor activity | 1.08E-03 |
| 38 | GO:0016491: oxidoreductase activity | 1.28E-03 |
| 39 | GO:0019825: oxygen binding | 1.58E-03 |
| 40 | GO:0035673: oligopeptide transmembrane transporter activity | 1.67E-03 |
| 41 | GO:0102391: decanoate--CoA ligase activity | 2.01E-03 |
| 42 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.01E-03 |
| 43 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.01E-03 |
| 44 | GO:0004124: cysteine synthase activity | 2.01E-03 |
| 45 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.36E-03 |
| 46 | GO:0042802: identical protein binding | 2.91E-03 |
| 47 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.12E-03 |
| 48 | GO:0008168: methyltransferase activity | 3.56E-03 |
| 49 | GO:0015198: oligopeptide transporter activity | 5.34E-03 |
| 50 | GO:0052689: carboxylic ester hydrolase activity | 5.58E-03 |
| 51 | GO:0010329: auxin efflux transmembrane transporter activity | 5.83E-03 |
| 52 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.83E-03 |
| 53 | GO:0031072: heat shock protein binding | 5.83E-03 |
| 54 | GO:0000155: phosphorelay sensor kinase activity | 5.83E-03 |
| 55 | GO:0003774: motor activity | 6.33E-03 |
| 56 | GO:0020037: heme binding | 6.52E-03 |
| 57 | GO:0005528: FK506 binding | 7.95E-03 |
| 58 | GO:0030170: pyridoxal phosphate binding | 1.08E-02 |
| 59 | GO:0010181: FMN binding | 1.36E-02 |
| 60 | GO:0008017: microtubule binding | 1.41E-02 |
| 61 | GO:0004872: receptor activity | 1.42E-02 |
| 62 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.50E-02 |
| 63 | GO:0004518: nuclease activity | 1.57E-02 |
| 64 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.79E-02 |
| 65 | GO:0003729: mRNA binding | 2.04E-02 |
| 66 | GO:0016788: hydrolase activity, acting on ester bonds | 2.13E-02 |
| 67 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.18E-02 |
| 68 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.26E-02 |
| 69 | GO:0003993: acid phosphatase activity | 2.86E-02 |
| 70 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.05E-02 |
| 71 | GO:0005525: GTP binding | 3.12E-02 |
| 72 | GO:0004364: glutathione transferase activity | 3.23E-02 |
| 73 | GO:0004185: serine-type carboxypeptidase activity | 3.32E-02 |
| 74 | GO:0035091: phosphatidylinositol binding | 3.52E-02 |
| 75 | GO:0043621: protein self-association | 3.52E-02 |
| 76 | GO:0005198: structural molecule activity | 3.61E-02 |
| 77 | GO:0015293: symporter activity | 3.61E-02 |
| 78 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.71E-02 |
| 79 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.11E-02 |
| 80 | GO:0003690: double-stranded DNA binding | 4.21E-02 |
| 81 | GO:0016298: lipase activity | 4.21E-02 |
| 82 | GO:0005215: transporter activity | 4.55E-02 |
| 83 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.73E-02 |