GO Enrichment Analysis of Co-expressed Genes with
AT2G30120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010387: COP9 signalosome assembly | 1.12E-05 |
| 2 | GO:0000338: protein deneddylation | 5.34E-05 |
| 3 | GO:1900368: regulation of RNA interference | 1.14E-04 |
| 4 | GO:0097502: mannosylation | 1.14E-04 |
| 5 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 1.14E-04 |
| 6 | GO:0043985: histone H4-R3 methylation | 1.14E-04 |
| 7 | GO:0009805: coumarin biosynthetic process | 2.65E-04 |
| 8 | GO:0006672: ceramide metabolic process | 2.65E-04 |
| 9 | GO:0045732: positive regulation of protein catabolic process | 2.65E-04 |
| 10 | GO:0006874: cellular calcium ion homeostasis | 4.22E-04 |
| 11 | GO:2000082: regulation of L-ascorbic acid biosynthetic process | 4.38E-04 |
| 12 | GO:0006168: adenine salvage | 6.29E-04 |
| 13 | GO:0006166: purine ribonucleoside salvage | 6.29E-04 |
| 14 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 6.29E-04 |
| 15 | GO:0045227: capsule polysaccharide biosynthetic process | 8.35E-04 |
| 16 | GO:0010483: pollen tube reception | 8.35E-04 |
| 17 | GO:0033358: UDP-L-arabinose biosynthetic process | 8.35E-04 |
| 18 | GO:0000919: cell plate assembly | 8.35E-04 |
| 19 | GO:0018279: protein N-linked glycosylation via asparagine | 1.05E-03 |
| 20 | GO:0044209: AMP salvage | 1.05E-03 |
| 21 | GO:0006544: glycine metabolic process | 1.05E-03 |
| 22 | GO:0048579: negative regulation of long-day photoperiodism, flowering | 1.29E-03 |
| 23 | GO:0006563: L-serine metabolic process | 1.29E-03 |
| 24 | GO:0009612: response to mechanical stimulus | 1.54E-03 |
| 25 | GO:0008219: cell death | 1.69E-03 |
| 26 | GO:0015937: coenzyme A biosynthetic process | 1.81E-03 |
| 27 | GO:0048528: post-embryonic root development | 1.81E-03 |
| 28 | GO:0009690: cytokinin metabolic process | 2.09E-03 |
| 29 | GO:0010120: camalexin biosynthetic process | 2.39E-03 |
| 30 | GO:0010100: negative regulation of photomorphogenesis | 2.39E-03 |
| 31 | GO:0009699: phenylpropanoid biosynthetic process | 2.39E-03 |
| 32 | GO:0007186: G-protein coupled receptor signaling pathway | 2.39E-03 |
| 33 | GO:0009640: photomorphogenesis | 2.74E-03 |
| 34 | GO:0043067: regulation of programmed cell death | 3.02E-03 |
| 35 | GO:0035999: tetrahydrofolate interconversion | 3.02E-03 |
| 36 | GO:0006952: defense response | 3.22E-03 |
| 37 | GO:0009585: red, far-red light phototransduction | 3.68E-03 |
| 38 | GO:0006813: potassium ion transport | 3.68E-03 |
| 39 | GO:0009682: induced systemic resistance | 3.71E-03 |
| 40 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.80E-03 |
| 41 | GO:0006790: sulfur compound metabolic process | 4.06E-03 |
| 42 | GO:0010030: positive regulation of seed germination | 5.21E-03 |
| 43 | GO:0046854: phosphatidylinositol phosphorylation | 5.21E-03 |
| 44 | GO:0009225: nucleotide-sugar metabolic process | 5.21E-03 |
| 45 | GO:0006863: purine nucleobase transport | 5.61E-03 |
| 46 | GO:0006487: protein N-linked glycosylation | 6.03E-03 |
| 47 | GO:0009116: nucleoside metabolic process | 6.03E-03 |
| 48 | GO:0042742: defense response to bacterium | 6.11E-03 |
| 49 | GO:0031348: negative regulation of defense response | 7.34E-03 |
| 50 | GO:0071456: cellular response to hypoxia | 7.34E-03 |
| 51 | GO:0019748: secondary metabolic process | 7.34E-03 |
| 52 | GO:0010227: floral organ abscission | 7.79E-03 |
| 53 | GO:0006012: galactose metabolic process | 7.79E-03 |
| 54 | GO:0006284: base-excision repair | 8.26E-03 |
| 55 | GO:0009561: megagametogenesis | 8.26E-03 |
| 56 | GO:0051028: mRNA transport | 8.74E-03 |
| 57 | GO:0008284: positive regulation of cell proliferation | 8.74E-03 |
| 58 | GO:0007623: circadian rhythm | 9.00E-03 |
| 59 | GO:0000413: protein peptidyl-prolyl isomerization | 9.23E-03 |
| 60 | GO:0006885: regulation of pH | 9.73E-03 |
| 61 | GO:0010197: polar nucleus fusion | 9.73E-03 |
| 62 | GO:0048868: pollen tube development | 9.73E-03 |
| 63 | GO:0009416: response to light stimulus | 1.01E-02 |
| 64 | GO:0016567: protein ubiquitination | 1.01E-02 |
| 65 | GO:0009617: response to bacterium | 1.08E-02 |
| 66 | GO:0006623: protein targeting to vacuole | 1.08E-02 |
| 67 | GO:0046686: response to cadmium ion | 1.19E-02 |
| 68 | GO:0071805: potassium ion transmembrane transport | 1.35E-02 |
| 69 | GO:0016579: protein deubiquitination | 1.40E-02 |
| 70 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.48E-02 |
| 71 | GO:0009607: response to biotic stimulus | 1.52E-02 |
| 72 | GO:0009817: defense response to fungus, incompatible interaction | 1.77E-02 |
| 73 | GO:0007165: signal transduction | 1.85E-02 |
| 74 | GO:0006499: N-terminal protein myristoylation | 1.89E-02 |
| 75 | GO:0009407: toxin catabolic process | 1.89E-02 |
| 76 | GO:0010043: response to zinc ion | 1.96E-02 |
| 77 | GO:0009867: jasmonic acid mediated signaling pathway | 2.09E-02 |
| 78 | GO:0010114: response to red light | 2.50E-02 |
| 79 | GO:0009926: auxin polar transport | 2.50E-02 |
| 80 | GO:0042546: cell wall biogenesis | 2.57E-02 |
| 81 | GO:0006812: cation transport | 2.94E-02 |
| 82 | GO:0042538: hyperosmotic salinity response | 2.94E-02 |
| 83 | GO:0006486: protein glycosylation | 3.09E-02 |
| 84 | GO:0050832: defense response to fungus | 3.12E-02 |
| 85 | GO:0043086: negative regulation of catalytic activity | 3.49E-02 |
| 86 | GO:0009620: response to fungus | 3.73E-02 |
| 87 | GO:0009058: biosynthetic process | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033746: histone demethylase activity (H3-R2 specific) | 0.00E+00 |
| 2 | GO:0001729: ceramide kinase activity | 0.00E+00 |
| 3 | GO:0033749: histone demethylase activity (H4-R3 specific) | 0.00E+00 |
| 4 | GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 5 | GO:0000033: alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 6 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 7 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 8 | GO:0015157: oligosaccharide transmembrane transporter activity | 1.14E-04 |
| 9 | GO:0000386: second spliceosomal transesterification activity | 1.14E-04 |
| 10 | GO:0004633: phosphopantothenoylcysteine decarboxylase activity | 1.14E-04 |
| 11 | GO:2001147: camalexin binding | 1.14E-04 |
| 12 | GO:2001227: quercitrin binding | 1.14E-04 |
| 13 | GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity | 1.14E-04 |
| 14 | GO:0004566: beta-glucuronidase activity | 2.65E-04 |
| 15 | GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity | 2.65E-04 |
| 16 | GO:0004970: ionotropic glutamate receptor activity | 3.08E-04 |
| 17 | GO:0005217: intracellular ligand-gated ion channel activity | 3.08E-04 |
| 18 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 4.38E-04 |
| 19 | GO:0004298: threonine-type endopeptidase activity | 4.64E-04 |
| 20 | GO:0003999: adenine phosphoribosyltransferase activity | 6.29E-04 |
| 21 | GO:0046527: glucosyltransferase activity | 8.35E-04 |
| 22 | GO:0004576: oligosaccharyl transferase activity | 8.35E-04 |
| 23 | GO:0050373: UDP-arabinose 4-epimerase activity | 8.35E-04 |
| 24 | GO:0004930: G-protein coupled receptor activity | 8.35E-04 |
| 25 | GO:0004372: glycine hydroxymethyltransferase activity | 1.05E-03 |
| 26 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.05E-03 |
| 27 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.54E-03 |
| 28 | GO:0003978: UDP-glucose 4-epimerase activity | 1.54E-03 |
| 29 | GO:0003824: catalytic activity | 1.70E-03 |
| 30 | GO:0043295: glutathione binding | 1.81E-03 |
| 31 | GO:0003951: NAD+ kinase activity | 2.39E-03 |
| 32 | GO:0008233: peptidase activity | 2.90E-03 |
| 33 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.71E-03 |
| 34 | GO:0008134: transcription factor binding | 6.03E-03 |
| 35 | GO:0015079: potassium ion transmembrane transporter activity | 6.45E-03 |
| 36 | GO:0005345: purine nucleobase transmembrane transporter activity | 6.45E-03 |
| 37 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 6.89E-03 |
| 38 | GO:0008810: cellulase activity | 7.79E-03 |
| 39 | GO:0003727: single-stranded RNA binding | 8.26E-03 |
| 40 | GO:0005451: monovalent cation:proton antiporter activity | 9.23E-03 |
| 41 | GO:0004842: ubiquitin-protein transferase activity | 9.97E-03 |
| 42 | GO:0050662: coenzyme binding | 1.02E-02 |
| 43 | GO:0015299: solute:proton antiporter activity | 1.02E-02 |
| 44 | GO:0010181: FMN binding | 1.02E-02 |
| 45 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.13E-02 |
| 46 | GO:0015385: sodium:proton antiporter activity | 1.24E-02 |
| 47 | GO:0008237: metallopeptidase activity | 1.35E-02 |
| 48 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.43E-02 |
| 49 | GO:0051213: dioxygenase activity | 1.46E-02 |
| 50 | GO:0030247: polysaccharide binding | 1.64E-02 |
| 51 | GO:0005096: GTPase activator activity | 1.83E-02 |
| 52 | GO:0004222: metalloendopeptidase activity | 1.89E-02 |
| 53 | GO:0030145: manganese ion binding | 1.96E-02 |
| 54 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.09E-02 |
| 55 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.16E-02 |
| 56 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.29E-02 |
| 57 | GO:0004364: glutathione transferase activity | 2.43E-02 |
| 58 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.79E-02 |
| 59 | GO:0045735: nutrient reservoir activity | 3.49E-02 |
| 60 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.73E-02 |
| 61 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.73E-02 |
| 62 | GO:0016874: ligase activity | 3.81E-02 |
| 63 | GO:0004386: helicase activity | 4.23E-02 |
| 64 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.75E-02 |