Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G29340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009103: lipopolysaccharide biosynthetic process0.00E+00
2GO:0009661: chromoplast organization0.00E+00
3GO:0090358: positive regulation of tryptophan metabolic process0.00E+00
4GO:1905157: positive regulation of photosynthesis0.00E+00
5GO:1902334: fructose export from vacuole to cytoplasm0.00E+00
6GO:0033231: carbohydrate export0.00E+00
7GO:0033468: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
8GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
9GO:0006573: valine metabolic process0.00E+00
10GO:0090355: positive regulation of auxin metabolic process0.00E+00
11GO:0009098: leucine biosynthetic process6.65E-05
12GO:0006551: leucine metabolic process7.23E-05
13GO:0042371: vitamin K biosynthetic process7.23E-05
14GO:0043007: maintenance of rDNA7.23E-05
15GO:0015755: fructose transport7.23E-05
16GO:0006995: cellular response to nitrogen starvation7.98E-05
17GO:0009750: response to fructose9.43E-05
18GO:0071497: cellular response to freezing1.74E-04
19GO:1904143: positive regulation of carotenoid biosynthetic process1.74E-04
20GO:0006898: receptor-mediated endocytosis1.74E-04
21GO:0006863: purine nucleobase transport1.85E-04
22GO:0051260: protein homooligomerization2.53E-04
23GO:0006696: ergosterol biosynthetic process2.93E-04
24GO:0015695: organic cation transport2.93E-04
25GO:0019761: glucosinolate biosynthetic process5.49E-04
26GO:0009902: chloroplast relocation5.65E-04
27GO:0072488: ammonium transmembrane transport5.65E-04
28GO:0071483: cellular response to blue light5.65E-04
29GO:0009904: chloroplast accumulation movement7.14E-04
30GO:0016120: carotene biosynthetic process7.14E-04
31GO:0009643: photosynthetic acclimation8.73E-04
32GO:0010315: auxin efflux8.73E-04
33GO:0009099: valine biosynthetic process1.04E-03
34GO:0009903: chloroplast avoidance movement1.04E-03
35GO:0009554: megasporogenesis1.04E-03
36GO:0009854: oxidative photosynthetic carbon pathway1.04E-03
37GO:0010019: chloroplast-nucleus signaling pathway1.04E-03
38GO:0009082: branched-chain amino acid biosynthetic process1.04E-03
39GO:1900056: negative regulation of leaf senescence1.21E-03
40GO:0050821: protein stabilization1.40E-03
41GO:0009231: riboflavin biosynthetic process1.40E-03
42GO:0009097: isoleucine biosynthetic process1.59E-03
43GO:0006526: arginine biosynthetic process1.59E-03
44GO:0048354: mucilage biosynthetic process involved in seed coat development2.01E-03
45GO:0010380: regulation of chlorophyll biosynthetic process2.01E-03
46GO:0009641: shade avoidance2.23E-03
47GO:0010192: mucilage biosynthetic process2.23E-03
48GO:0043085: positive regulation of catalytic activity2.46E-03
49GO:0007015: actin filament organization3.19E-03
50GO:0010223: secondary shoot formation3.19E-03
51GO:0034605: cellular response to heat3.19E-03
52GO:0000162: tryptophan biosynthetic process3.71E-03
53GO:0051017: actin filament bundle assembly3.98E-03
54GO:0019915: lipid storage4.54E-03
55GO:0071369: cellular response to ethylene stimulus5.13E-03
56GO:0009294: DNA mediated transformation5.13E-03
57GO:0045893: positive regulation of transcription, DNA-templated5.52E-03
58GO:0016117: carotenoid biosynthetic process5.74E-03
59GO:0070417: cellular response to cold5.74E-03
60GO:0009646: response to absence of light6.70E-03
61GO:0009851: auxin biosynthetic process7.04E-03
62GO:0009749: response to glucose7.04E-03
63GO:0009826: unidimensional cell growth7.31E-03
64GO:0009658: chloroplast organization7.59E-03
65GO:0015995: chlorophyll biosynthetic process1.07E-02
66GO:0071555: cell wall organization1.13E-02
67GO:0030244: cellulose biosynthetic process1.15E-02
68GO:0009834: plant-type secondary cell wall biogenesis1.23E-02
69GO:0009910: negative regulation of flower development1.27E-02
70GO:0009853: photorespiration1.36E-02
71GO:0009744: response to sucrose1.63E-02
72GO:0008643: carbohydrate transport1.72E-02
73GO:0009664: plant-type cell wall organization1.91E-02
74GO:0042538: hyperosmotic salinity response1.91E-02
75GO:0009585: red, far-red light phototransduction2.01E-02
76GO:0006813: potassium ion transport2.01E-02
77GO:0006857: oligopeptide transport2.11E-02
78GO:0048367: shoot system development2.31E-02
79GO:0009555: pollen development2.48E-02
80GO:0009624: response to nematode2.58E-02
81GO:0042744: hydrogen peroxide catabolic process3.32E-02
82GO:0007623: circadian rhythm3.81E-02
83GO:0009617: response to bacterium4.32E-02
RankGO TermAdjusted P value
1GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
2GO:0015284: fructose uniporter activity0.00E+00
3GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
4GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity0.00E+00
5GO:0046905: phytoene synthase activity0.00E+00
6GO:0004055: argininosuccinate synthase activity0.00E+00
7GO:0005353: fructose transmembrane transporter activity2.93E-07
8GO:0046906: tetrapyrrole binding7.23E-05
9GO:0047259: glucomannan 4-beta-mannosyltransferase activity7.23E-05
10GO:0051996: squalene synthase activity7.23E-05
11GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity7.23E-05
12GO:0016618: hydroxypyruvate reductase activity7.23E-05
13GO:0003984: acetolactate synthase activity7.23E-05
14GO:0080105: 6-methylthiopropyl glucosinolate S-oxygenase activity7.23E-05
15GO:0051119: sugar transmembrane transporter activity1.64E-04
16GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.74E-04
17GO:0003862: 3-isopropylmalate dehydrogenase activity1.74E-04
18GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity1.74E-04
19GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity1.74E-04
20GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity1.74E-04
21GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity1.74E-04
22GO:0005345: purine nucleobase transmembrane transporter activity2.30E-04
23GO:0030267: glyoxylate reductase (NADP) activity2.93E-04
24GO:0003861: 3-isopropylmalate dehydratase activity2.93E-04
25GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity2.93E-04
26GO:0003935: GTP cyclohydrolase II activity2.93E-04
27GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity4.23E-04
28GO:0022890: inorganic cation transmembrane transporter activity4.23E-04
29GO:0016836: hydro-lyase activity5.65E-04
30GO:0080032: methyl jasmonate esterase activity5.65E-04
31GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen7.14E-04
32GO:0008519: ammonium transmembrane transporter activity8.73E-04
33GO:0080030: methyl indole-3-acetate esterase activity8.73E-04
34GO:0051753: mannan synthase activity1.04E-03
35GO:0019899: enzyme binding1.21E-03
36GO:0051287: NAD binding1.82E-03
37GO:0015386: potassium:proton antiporter activity2.46E-03
38GO:0008515: sucrose transmembrane transporter activity2.46E-03
39GO:0022857: transmembrane transporter activity2.70E-03
40GO:0015079: potassium ion transmembrane transporter activity4.26E-03
41GO:0016779: nucleotidyltransferase activity4.83E-03
42GO:0004499: N,N-dimethylaniline monooxygenase activity5.43E-03
43GO:0015299: solute:proton antiporter activity6.70E-03
44GO:0005355: glucose transmembrane transporter activity6.70E-03
45GO:0016597: amino acid binding9.16E-03
46GO:0050661: NADP binding1.49E-02
47GO:0009055: electron carrier activity1.50E-02
48GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.31E-02
49GO:0015035: protein disulfide oxidoreductase activity2.64E-02
50GO:0008017: microtubule binding3.94E-02
51GO:0042802: identical protein binding4.52E-02
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Gene type



Gene DE type