co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G29170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0061635: regulation of protein complex stability	0.00E+00
3	GO:0015979: photosynthesis	3.39E-16
4	GO:0010196: nonphotochemical quenching	3.95E-10
5	GO:0090391: granum assembly	6.70E-10
6	GO:0009768: photosynthesis, light harvesting in photosystem I	4.87E-08
7	GO:0009735: response to cytokinin	4.47E-07
8	GO:0018298: protein-chromophore linkage	1.38E-06
9	GO:0009642: response to light intensity	3.06E-05
10	GO:0015995: chlorophyll biosynthetic process	4.41E-05
11	GO:0010218: response to far red light	6.01E-05
12	GO:0080093: regulation of photorespiration	6.74E-05
13	GO:0031998: regulation of fatty acid beta-oxidation	6.74E-05
14	GO:0009637: response to blue light	7.43E-05
15	GO:0043085: positive regulation of catalytic activity	8.50E-05
16	GO:0009773: photosynthetic electron transport in photosystem I	8.50E-05
17	GO:0010114: response to red light	1.09E-04
18	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.62E-04
19	GO:0016570: histone modification	2.75E-04
20	GO:0006662: glycerol ether metabolic process	3.82E-04
21	GO:0043207: response to external biotic stimulus	3.98E-04
22	GO:0006546: glycine catabolic process	5.32E-04
23	GO:0019464: glycine decarboxylation via glycine cleavage system	5.32E-04
24	GO:0006109: regulation of carbohydrate metabolic process	5.32E-04
25	GO:0010027: thylakoid membrane organization	6.71E-04
26	GO:0006097: glyoxylate cycle	6.73E-04
27	GO:0050665: hydrogen peroxide biosynthetic process	8.23E-04
28	GO:0009658: chloroplast organization	9.40E-04
29	GO:0042254: ribosome biogenesis	9.62E-04
30	GO:0009854: oxidative photosynthetic carbon pathway	9.79E-04
31	GO:0034599: cellular response to oxidative stress	1.13E-03
32	GO:0006368: transcription elongation from RNA polymerase II promoter	1.14E-03
33	GO:0009772: photosynthetic electron transport in photosystem II	1.14E-03
34	GO:0080167: response to karrikin	1.22E-03
35	GO:0032544: plastid translation	1.50E-03
36	GO:0022900: electron transport chain	1.50E-03
37	GO:0045454: cell redox homeostasis	1.53E-03
38	GO:0010206: photosystem II repair	1.69E-03
39	GO:0009245: lipid A biosynthetic process	1.69E-03
40	GO:0042761: very long-chain fatty acid biosynthetic process	1.89E-03
41	GO:0006412: translation	2.12E-03
42	GO:0043086: negative regulation of catalytic activity	2.18E-03
43	GO:0072593: reactive oxygen species metabolic process	2.31E-03
44	GO:0018119: peptidyl-cysteine S-nitrosylation	2.31E-03
45	GO:0009698: phenylpropanoid metabolic process	2.31E-03
46	GO:0006108: malate metabolic process	2.76E-03
47	GO:0006006: glucose metabolic process	2.76E-03
48	GO:0010207: photosystem II assembly	2.99E-03
49	GO:0009266: response to temperature stimulus	2.99E-03
50	GO:0019253: reductive pentose-phosphate cycle	2.99E-03
51	GO:0006636: unsaturated fatty acid biosynthetic process	3.48E-03
52	GO:0006633: fatty acid biosynthetic process	4.08E-03
53	GO:0040007: growth	4.81E-03
54	GO:0000413: protein peptidyl-prolyl isomerization	5.68E-03
55	GO:0042631: cellular response to water deprivation	5.68E-03
56	GO:0042335: cuticle development	5.68E-03
57	GO:0015986: ATP synthesis coupled proton transport	6.28E-03
58	GO:0055072: iron ion homeostasis	6.60E-03
59	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	6.91E-03
60	GO:0010193: response to ozone	6.91E-03
61	GO:0009627: systemic acquired resistance	9.65E-03
62	GO:0055114: oxidation-reduction process	1.05E-02
63	GO:0007568: aging	1.19E-02
64	GO:0009631: cold acclimation	1.19E-02
65	GO:0006865: amino acid transport	1.23E-02
66	GO:0006099: tricarboxylic acid cycle	1.31E-02
67	GO:0006812: cation transport	1.79E-02
68	GO:0010224: response to UV-B	1.93E-02
69	GO:0009909: regulation of flower development	2.02E-02
70	GO:0009908: flower development	2.04E-02
71	GO:0006096: glycolytic process	2.12E-02
72	GO:0009416: response to light stimulus	2.26E-02
73	GO:0006457: protein folding	2.92E-02
74	GO:0010150: leaf senescence	3.57E-02
75	GO:0042742: defense response to bacterium	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
2	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
3	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
4	GO:0031409: pigment binding	2.98E-08
5	GO:0016168: chlorophyll binding	8.62E-07
6	GO:0009374: biotin binding	6.74E-05
7	GO:0008047: enzyme activator activity	7.18E-05
8	GO:0051537: 2 iron, 2 sulfur cluster binding	1.22E-04
9	GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding	1.62E-04
10	GO:0016630: protochlorophyllide reductase activity	1.62E-04
11	GO:0016868: intramolecular transferase activity, phosphotransferases	1.62E-04
12	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.62E-04
13	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.62E-04
14	GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding	2.75E-04
15	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.75E-04
16	GO:0015035: protein disulfide oxidoreductase activity	2.81E-04
17	GO:0003735: structural constituent of ribosome	3.10E-04
18	GO:0047134: protein-disulfide reductase activity	3.27E-04
19	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	3.98E-04
20	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	3.98E-04
21	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	3.98E-04
22	GO:0004375: glycine dehydrogenase (decarboxylating) activity	3.98E-04
23	GO:0016851: magnesium chelatase activity	3.98E-04
24	GO:0004791: thioredoxin-disulfide reductase activity	4.10E-04
25	GO:0008891: glycolate oxidase activity	5.32E-04
26	GO:0052793: pectin acetylesterase activity	5.32E-04
27	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	5.33E-04
28	GO:0003989: acetyl-CoA carboxylase activity	6.73E-04
29	GO:0031177: phosphopantetheine binding	8.23E-04
30	GO:0016615: malate dehydrogenase activity	8.23E-04
31	GO:0000035: acyl binding	9.79E-04
32	GO:0030060: L-malate dehydrogenase activity	9.79E-04
33	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.32E-03
34	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.50E-03
35	GO:0009055: electron carrier activity	2.18E-03
36	GO:0046872: metal ion binding	2.39E-03
37	GO:0031072: heat shock protein binding	2.76E-03
38	GO:0019843: rRNA binding	3.25E-03
39	GO:0004857: enzyme inhibitor activity	3.73E-03
40	GO:0051087: chaperone binding	3.99E-03
41	GO:0043424: protein histidine kinase binding	3.99E-03
42	GO:0003756: protein disulfide isomerase activity	5.09E-03
43	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	5.98E-03
44	GO:0010181: FMN binding	6.28E-03
45	GO:0003993: acid phosphatase activity	1.31E-02
46	GO:0050661: NADP binding	1.39E-02
47	GO:0016491: oxidoreductase activity	1.43E-02
48	GO:0004185: serine-type carboxypeptidase activity	1.52E-02
49	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.70E-02
50	GO:0051287: NAD binding	1.74E-02
51	GO:0015171: amino acid transmembrane transporter activity	2.02E-02
52	GO:0051082: unfolded protein binding	2.42E-02
53	GO:0046910: pectinesterase inhibitor activity	3.39E-02
54	GO:0015297: antiporter activity	3.45E-02
55	GO:0005509: calcium ion binding	4.20E-02