co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G29070

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002084: protein depalmitoylation	0.00E+00
2	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
3	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
4	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
5	GO:0034756: regulation of iron ion transport	0.00E+00
6	GO:0046865: terpenoid transport	0.00E+00
7	GO:0006874: cellular calcium ion homeostasis	2.64E-05
8	GO:0055074: calcium ion homeostasis	3.92E-05
9	GO:0010120: camalexin biosynthetic process	4.22E-05
10	GO:0009617: response to bacterium	3.64E-04
11	GO:0042742: defense response to bacterium	4.05E-04
12	GO:0031123: RNA 3'-end processing	5.15E-04
13	GO:0015760: glucose-6-phosphate transport	5.15E-04
14	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	5.15E-04
15	GO:0010421: hydrogen peroxide-mediated programmed cell death	5.15E-04
16	GO:0002143: tRNA wobble position uridine thiolation	5.15E-04
17	GO:0098789: pre-mRNA cleavage required for polyadenylation	5.15E-04
18	GO:0009700: indole phytoalexin biosynthetic process	5.15E-04
19	GO:0010230: alternative respiration	5.15E-04
20	GO:0042868: antisense RNA metabolic process	5.15E-04
21	GO:0046244: salicylic acid catabolic process	5.15E-04
22	GO:1900056: negative regulation of leaf senescence	5.37E-04
23	GO:0071369: cellular response to ethylene stimulus	5.49E-04
24	GO:0006102: isocitrate metabolic process	6.69E-04
25	GO:0010204: defense response signaling pathway, resistance gene-independent	8.15E-04
26	GO:0009156: ribonucleoside monophosphate biosynthetic process	1.11E-03
27	GO:0035335: peptidyl-tyrosine dephosphorylation	1.11E-03
28	GO:0080183: response to photooxidative stress	1.11E-03
29	GO:0015709: thiosulfate transport	1.11E-03
30	GO:0071422: succinate transmembrane transport	1.11E-03
31	GO:0046939: nucleotide phosphorylation	1.11E-03
32	GO:0009805: coumarin biosynthetic process	1.11E-03
33	GO:0048569: post-embryonic animal organ development	1.11E-03
34	GO:0050684: regulation of mRNA processing	1.11E-03
35	GO:0042853: L-alanine catabolic process	1.11E-03
36	GO:0006672: ceramide metabolic process	1.11E-03
37	GO:0008535: respiratory chain complex IV assembly	1.11E-03
38	GO:0015712: hexose phosphate transport	1.11E-03
39	GO:0051252: regulation of RNA metabolic process	1.11E-03
40	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.34E-03
41	GO:0009626: plant-type hypersensitive response	1.80E-03
42	GO:0045836: positive regulation of meiotic nuclear division	1.81E-03
43	GO:0006517: protein deglycosylation	1.81E-03
44	GO:0071494: cellular response to UV-C	1.81E-03
45	GO:0015692: lead ion transport	1.81E-03
46	GO:0060968: regulation of gene silencing	1.81E-03
47	GO:0015714: phosphoenolpyruvate transport	1.81E-03
48	GO:0080168: abscisic acid transport	1.81E-03
49	GO:0071367: cellular response to brassinosteroid stimulus	1.81E-03
50	GO:0032784: regulation of DNA-templated transcription, elongation	1.81E-03
51	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.81E-03
52	GO:0017006: protein-tetrapyrrole linkage	1.81E-03
53	GO:0035436: triose phosphate transmembrane transport	1.81E-03
54	GO:0009627: systemic acquired resistance	1.97E-03
55	GO:0009225: nucleotide-sugar metabolic process	2.55E-03
56	GO:0055089: fatty acid homeostasis	2.63E-03
57	GO:0000187: activation of MAPK activity	2.63E-03
58	GO:0015729: oxaloacetate transport	2.63E-03
59	GO:0002239: response to oomycetes	2.63E-03
60	GO:0009584: detection of visible light	2.63E-03
61	GO:0072334: UDP-galactose transmembrane transport	2.63E-03
62	GO:0010731: protein glutathionylation	2.63E-03
63	GO:0010104: regulation of ethylene-activated signaling pathway	2.63E-03
64	GO:0009407: toxin catabolic process	2.73E-03
65	GO:0006099: tricarboxylic acid cycle	3.45E-03
66	GO:0009165: nucleotide biosynthetic process	3.54E-03
67	GO:0010109: regulation of photosynthesis	3.54E-03
68	GO:0045227: capsule polysaccharide biosynthetic process	3.54E-03
69	GO:0033320: UDP-D-xylose biosynthetic process	3.54E-03
70	GO:0010483: pollen tube reception	3.54E-03
71	GO:0006536: glutamate metabolic process	3.54E-03
72	GO:0033358: UDP-L-arabinose biosynthetic process	3.54E-03
73	GO:0010363: regulation of plant-type hypersensitive response	3.54E-03
74	GO:0000919: cell plate assembly	3.54E-03
75	GO:0015713: phosphoglycerate transport	3.54E-03
76	GO:0071456: cellular response to hypoxia	4.20E-03
77	GO:0019748: secondary metabolic process	4.20E-03
78	GO:0009814: defense response, incompatible interaction	4.20E-03
79	GO:0051707: response to other organism	4.51E-03
80	GO:0006952: defense response	4.53E-03
81	GO:0000380: alternative mRNA splicing, via spliceosome	4.54E-03
82	GO:0045927: positive regulation of growth	4.54E-03
83	GO:0018279: protein N-linked glycosylation via asparagine	4.54E-03
84	GO:0071423: malate transmembrane transport	4.54E-03
85	GO:0046283: anthocyanin-containing compound metabolic process	4.54E-03
86	GO:0006544: glycine metabolic process	4.54E-03
87	GO:0097428: protein maturation by iron-sulfur cluster transfer	4.54E-03
88	GO:0010227: floral organ abscission	4.58E-03
89	GO:0006012: galactose metabolic process	4.58E-03
90	GO:0010150: leaf senescence	5.01E-03
91	GO:0009636: response to toxic substance	5.23E-03
92	GO:0042147: retrograde transport, endosome to Golgi	5.41E-03
93	GO:0006561: proline biosynthetic process	5.63E-03
94	GO:0006563: L-serine metabolic process	5.63E-03
95	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	5.63E-03
96	GO:0042732: D-xylose metabolic process	5.63E-03
97	GO:0060918: auxin transport	5.63E-03
98	GO:0042176: regulation of protein catabolic process	5.63E-03
99	GO:0048579: negative regulation of long-day photoperiodism, flowering	5.63E-03
100	GO:0009643: photosynthetic acclimation	5.63E-03
101	GO:0035435: phosphate ion transmembrane transport	5.63E-03
102	GO:0048544: recognition of pollen	6.78E-03
103	GO:0009612: response to mechanical stimulus	6.79E-03
104	GO:0048280: vesicle fusion with Golgi apparatus	6.79E-03
105	GO:0006623: protein targeting to vacuole	7.28E-03
106	GO:0002229: defense response to oomycetes	7.80E-03
107	GO:0006891: intra-Golgi vesicle-mediated transport	7.80E-03
108	GO:0010044: response to aluminum ion	8.04E-03
109	GO:0048528: post-embryonic root development	8.04E-03
110	GO:0080186: developmental vegetative growth	8.04E-03
111	GO:0015937: coenzyme A biosynthetic process	8.04E-03
112	GO:2000014: regulation of endosperm development	8.04E-03
113	GO:0008272: sulfate transport	8.04E-03
114	GO:0050829: defense response to Gram-negative bacterium	8.04E-03
115	GO:0050832: defense response to fungus	8.21E-03
116	GO:0031047: gene silencing by RNA	8.34E-03
117	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	9.36E-03
118	GO:0009819: drought recovery	9.36E-03
119	GO:0006491: N-glycan processing	9.36E-03
120	GO:2000070: regulation of response to water deprivation	9.36E-03
121	GO:0051607: defense response to virus	1.07E-02
122	GO:0009808: lignin metabolic process	1.08E-02
123	GO:0009699: phenylpropanoid biosynthetic process	1.08E-02
124	GO:0006002: fructose 6-phosphate metabolic process	1.08E-02
125	GO:0001558: regulation of cell growth	1.08E-02
126	GO:0007186: G-protein coupled receptor signaling pathway	1.08E-02
127	GO:0009657: plastid organization	1.08E-02
128	GO:0015780: nucleotide-sugar transport	1.22E-02
129	GO:0010112: regulation of systemic acquired resistance	1.22E-02
130	GO:0048589: developmental growth	1.22E-02
131	GO:0006468: protein phosphorylation	1.28E-02
132	GO:0006888: ER to Golgi vesicle-mediated transport	1.34E-02
133	GO:0043067: regulation of programmed cell death	1.38E-02
134	GO:0090332: stomatal closure	1.38E-02
135	GO:0035999: tetrahydrofolate interconversion	1.38E-02
136	GO:0048268: clathrin coat assembly	1.38E-02
137	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.38E-02
138	GO:0008219: cell death	1.48E-02
139	GO:0009058: biosynthetic process	1.48E-02
140	GO:0043069: negative regulation of programmed cell death	1.54E-02
141	GO:0006896: Golgi to vacuole transport	1.54E-02
142	GO:0006499: N-terminal protein myristoylation	1.64E-02
143	GO:0009089: lysine biosynthetic process via diaminopimelate	1.70E-02
144	GO:0009682: induced systemic resistance	1.70E-02
145	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.88E-02
146	GO:0006790: sulfur compound metabolic process	1.88E-02
147	GO:0016925: protein sumoylation	1.88E-02
148	GO:2000028: regulation of photoperiodism, flowering	2.05E-02
149	GO:0055046: microgametogenesis	2.05E-02
150	GO:0009718: anthocyanin-containing compound biosynthetic process	2.05E-02
151	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	2.05E-02
152	GO:0030048: actin filament-based movement	2.05E-02
153	GO:0006626: protein targeting to mitochondrion	2.05E-02
154	GO:0010102: lateral root morphogenesis	2.05E-02
155	GO:0009266: response to temperature stimulus	2.24E-02
156	GO:0006541: glutamine metabolic process	2.24E-02
157	GO:0009751: response to salicylic acid	2.37E-02
158	GO:0046686: response to cadmium ion	2.39E-02
159	GO:0046854: phosphatidylinositol phosphorylation	2.43E-02
160	GO:0010053: root epidermal cell differentiation	2.43E-02
161	GO:0042343: indole glucosinolate metabolic process	2.43E-02
162	GO:0010039: response to iron ion	2.43E-02
163	GO:0071732: cellular response to nitric oxide	2.43E-02
164	GO:0070588: calcium ion transmembrane transport	2.43E-02
165	GO:0006636: unsaturated fatty acid biosynthetic process	2.62E-02
166	GO:0016310: phosphorylation	2.70E-02
167	GO:0005992: trehalose biosynthetic process	2.83E-02
168	GO:0006487: protein N-linked glycosylation	2.83E-02
169	GO:0009116: nucleoside metabolic process	2.83E-02
170	GO:0051302: regulation of cell division	3.03E-02
171	GO:0042538: hyperosmotic salinity response	3.06E-02
172	GO:0098542: defense response to other organism	3.24E-02
173	GO:0031408: oxylipin biosynthetic process	3.24E-02
174	GO:0051321: meiotic cell cycle	3.24E-02
175	GO:0009809: lignin biosynthetic process	3.28E-02
176	GO:0010017: red or far-red light signaling pathway	3.46E-02
177	GO:0030433: ubiquitin-dependent ERAD pathway	3.46E-02
178	GO:0009625: response to insect	3.68E-02
179	GO:0071215: cellular response to abscisic acid stimulus	3.68E-02
180	GO:0006096: glycolytic process	3.87E-02
181	GO:0006284: base-excision repair	3.90E-02
182	GO:0016117: carotenoid biosynthetic process	4.13E-02
183	GO:0008284: positive regulation of cell proliferation	4.13E-02
184	GO:0009620: response to fungus	4.25E-02
185	GO:0010051: xylem and phloem pattern formation	4.37E-02
186	GO:0016569: covalent chromatin modification	4.38E-02
187	GO:0009958: positive gravitropism	4.61E-02
188	GO:0009960: endosperm development	4.61E-02
189	GO:0071472: cellular response to salt stress	4.61E-02
190	GO:0010197: polar nucleus fusion	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0001729: ceramide kinase activity	0.00E+00
2	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
3	GO:0051670: inulinase activity	0.00E+00
4	GO:0008092: cytoskeletal protein binding	0.00E+00
5	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
6	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
7	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
8	GO:0016301: kinase activity	1.32E-06
9	GO:0004970: ionotropic glutamate receptor activity	1.35E-05
10	GO:0005217: intracellular ligand-gated ion channel activity	1.35E-05
11	GO:0005524: ATP binding	2.21E-05
12	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.39E-05
13	GO:0030246: carbohydrate binding	1.10E-04
14	GO:0009916: alternative oxidase activity	1.45E-04
15	GO:0030247: polysaccharide binding	3.16E-04
16	GO:2001227: quercitrin binding	5.15E-04
17	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	5.15E-04
18	GO:0015157: oligosaccharide transmembrane transporter activity	5.15E-04
19	GO:0051669: fructan beta-fructosidase activity	5.15E-04
20	GO:0048037: cofactor binding	5.15E-04
21	GO:0000386: second spliceosomal transesterification activity	5.15E-04
22	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	5.15E-04
23	GO:0031219: levanase activity	5.15E-04
24	GO:2001147: camalexin binding	5.15E-04
25	GO:0010285: L,L-diaminopimelate aminotransferase activity	5.15E-04
26	GO:0004714: transmembrane receptor protein tyrosine kinase activity	6.69E-04
27	GO:0004566: beta-glucuronidase activity	1.11E-03
28	GO:0009883: red or far-red light photoreceptor activity	1.11E-03
29	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	1.11E-03
30	GO:0015152: glucose-6-phosphate transmembrane transporter activity	1.11E-03
31	GO:0008428: ribonuclease inhibitor activity	1.11E-03
32	GO:0004338: glucan exo-1,3-beta-glucosidase activity	1.11E-03
33	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.11E-03
34	GO:1901677: phosphate transmembrane transporter activity	1.11E-03
35	GO:0015117: thiosulfate transmembrane transporter activity	1.11E-03
36	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	1.11E-03
37	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.11E-03
38	GO:0008559: xenobiotic-transporting ATPase activity	1.55E-03
39	GO:0071917: triose-phosphate transmembrane transporter activity	1.81E-03
40	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	1.81E-03
41	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.81E-03
42	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.81E-03
43	GO:0015141: succinate transmembrane transporter activity	1.81E-03
44	GO:0008020: G-protein coupled photoreceptor activity	1.81E-03
45	GO:0004867: serine-type endopeptidase inhibitor activity	2.55E-03
46	GO:0004351: glutamate decarboxylase activity	2.63E-03
47	GO:0017077: oxidative phosphorylation uncoupler activity	2.63E-03
48	GO:0004749: ribose phosphate diphosphokinase activity	2.63E-03
49	GO:0019201: nucleotide kinase activity	2.63E-03
50	GO:0015131: oxaloacetate transmembrane transporter activity	2.63E-03
51	GO:0004792: thiosulfate sulfurtransferase activity	2.63E-03
52	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	2.63E-03
53	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.26E-03
54	GO:0015120: phosphoglycerate transmembrane transporter activity	3.54E-03
55	GO:0050373: UDP-arabinose 4-epimerase activity	3.54E-03
56	GO:0046527: glucosyltransferase activity	3.54E-03
57	GO:0004576: oligosaccharyl transferase activity	3.54E-03
58	GO:0004930: G-protein coupled receptor activity	3.54E-03
59	GO:0030170: pyridoxal phosphate binding	3.59E-03
60	GO:0004364: glutathione transferase activity	4.28E-03
61	GO:0005459: UDP-galactose transmembrane transporter activity	4.54E-03
62	GO:0004372: glycine hydroxymethyltransferase activity	4.54E-03
63	GO:0008641: small protein activating enzyme activity	4.54E-03
64	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	4.54E-03
65	GO:0008948: oxaloacetate decarboxylase activity	4.54E-03
66	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	4.54E-03
67	GO:0004040: amidase activity	4.54E-03
68	GO:0031386: protein tag	4.54E-03
69	GO:0008810: cellulase activity	4.58E-03
70	GO:0003727: single-stranded RNA binding	4.99E-03
71	GO:0048040: UDP-glucuronate decarboxylase activity	5.63E-03
72	GO:0008474: palmitoyl-(protein) hydrolase activity	5.63E-03
73	GO:0004722: protein serine/threonine phosphatase activity	5.90E-03
74	GO:0070403: NAD+ binding	6.79E-03
75	GO:0004017: adenylate kinase activity	6.79E-03
76	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.79E-03
77	GO:0004656: procollagen-proline 4-dioxygenase activity	6.79E-03
78	GO:0003978: UDP-glucose 4-epimerase activity	6.79E-03
79	GO:0004674: protein serine/threonine kinase activity	6.81E-03
80	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	7.22E-03
81	GO:0004872: receptor activity	7.28E-03
82	GO:0005509: calcium ion binding	7.92E-03
83	GO:0005338: nucleotide-sugar transmembrane transporter activity	8.04E-03
84	GO:0102425: myricetin 3-O-glucosyltransferase activity	8.04E-03
85	GO:0102360: daphnetin 3-O-glucosyltransferase activity	8.04E-03
86	GO:0016621: cinnamoyl-CoA reductase activity	8.04E-03
87	GO:0009881: photoreceptor activity	8.04E-03
88	GO:0003872: 6-phosphofructokinase activity	8.04E-03
89	GO:0015140: malate transmembrane transporter activity	8.04E-03
90	GO:0043295: glutathione binding	8.04E-03
91	GO:0004620: phospholipase activity	8.04E-03
92	GO:0046872: metal ion binding	8.61E-03
93	GO:0004034: aldose 1-epimerase activity	9.36E-03
94	GO:0047893: flavonol 3-O-glucosyltransferase activity	9.36E-03
95	GO:0004525: ribonuclease III activity	9.36E-03
96	GO:0004708: MAP kinase kinase activity	9.36E-03
97	GO:0000287: magnesium ion binding	9.47E-03
98	GO:0022857: transmembrane transporter activity	9.61E-03
99	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.01E-02
100	GO:0004630: phospholipase D activity	1.08E-02
101	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.08E-02
102	GO:0003951: NAD+ kinase activity	1.08E-02
103	GO:0001104: RNA polymerase II transcription cofactor activity	1.08E-02
104	GO:0043531: ADP binding	1.12E-02
105	GO:0051213: dioxygenase activity	1.13E-02
106	GO:0004497: monooxygenase activity	1.35E-02
107	GO:0030955: potassium ion binding	1.38E-02
108	GO:0004743: pyruvate kinase activity	1.38E-02
109	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.43E-02
110	GO:0030234: enzyme regulator activity	1.54E-02
111	GO:0004568: chitinase activity	1.54E-02
112	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.54E-02
113	GO:0005545: 1-phosphatidylinositol binding	1.54E-02
114	GO:0047372: acylglycerol lipase activity	1.70E-02
115	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.70E-02
116	GO:0008327: methyl-CpG binding	1.70E-02
117	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.88E-02
118	GO:0015116: sulfate transmembrane transporter activity	1.88E-02
119	GO:0015297: antiporter activity	1.96E-02
120	GO:0000155: phosphorelay sensor kinase activity	2.05E-02
121	GO:0005388: calcium-transporting ATPase activity	2.05E-02
122	GO:0004565: beta-galactosidase activity	2.05E-02
123	GO:0004022: alcohol dehydrogenase (NAD) activity	2.05E-02
124	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.05E-02
125	GO:0005315: inorganic phosphate transmembrane transporter activity	2.05E-02
126	GO:0003774: motor activity	2.24E-02
127	GO:0031624: ubiquitin conjugating enzyme binding	2.24E-02
128	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.24E-02
129	GO:0005506: iron ion binding	2.43E-02
130	GO:0003712: transcription cofactor activity	2.43E-02
131	GO:0004725: protein tyrosine phosphatase activity	2.62E-02
132	GO:0016740: transferase activity	2.73E-02
133	GO:0031418: L-ascorbic acid binding	2.83E-02
134	GO:0008408: 3'-5' exonuclease activity	3.24E-02
135	GO:0035251: UDP-glucosyltransferase activity	3.24E-02
136	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	3.24E-02
137	GO:0019825: oxygen binding	3.53E-02
138	GO:0031625: ubiquitin protein ligase binding	3.63E-02
139	GO:0045735: nutrient reservoir activity	3.87E-02
140	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.90E-02
141	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.25E-02
142	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.25E-02
143	GO:0005525: GTP binding	4.47E-02
144	GO:0004527: exonuclease activity	4.61E-02
145	GO:0030276: clathrin binding	4.61E-02
146	GO:0001085: RNA polymerase II transcription factor binding	4.61E-02
147	GO:0051082: unfolded protein binding	4.65E-02
148	GO:0015035: protein disulfide oxidoreductase activity	4.79E-02
149	GO:0016853: isomerase activity	4.85E-02
150	GO:0010181: FMN binding	4.85E-02