Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G25270

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019685: photosynthesis, dark reaction0.00E+00
2GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
3GO:0071482: cellular response to light stimulus1.32E-05
4GO:0015671: oxygen transport3.37E-05
5GO:0005980: glycogen catabolic process3.37E-05
6GO:0019388: galactose catabolic process8.48E-05
7GO:1900871: chloroplast mRNA modification8.48E-05
8GO:0010198: synergid death8.48E-05
9GO:0006435: threonyl-tRNA aminoacylation8.48E-05
10GO:0015940: pantothenate biosynthetic process1.47E-04
11GO:0005977: glycogen metabolic process1.47E-04
12GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.47E-04
13GO:0019252: starch biosynthetic process1.78E-04
14GO:0009590: detection of gravity2.18E-04
15GO:2001141: regulation of RNA biosynthetic process2.18E-04
16GO:0009102: biotin biosynthetic process2.18E-04
17GO:0010027: thylakoid membrane organization2.81E-04
18GO:0010021: amylopectin biosynthetic process2.95E-04
19GO:0006661: phosphatidylinositol biosynthetic process2.95E-04
20GO:0045038: protein import into chloroplast thylakoid membrane3.77E-04
21GO:0006655: phosphatidylglycerol biosynthetic process4.63E-04
22GO:1901259: chloroplast rRNA processing5.53E-04
23GO:0006614: SRP-dependent cotranslational protein targeting to membrane6.47E-04
24GO:0005978: glycogen biosynthetic process7.44E-04
25GO:0017004: cytochrome complex assembly8.45E-04
26GO:0019432: triglyceride biosynthetic process9.49E-04
27GO:0006779: porphyrin-containing compound biosynthetic process1.06E-03
28GO:0031425: chloroplast RNA processing1.06E-03
29GO:0006782: protoporphyrinogen IX biosynthetic process1.17E-03
30GO:0009089: lysine biosynthetic process via diaminopimelate1.28E-03
31GO:0006352: DNA-templated transcription, initiation1.28E-03
32GO:0005983: starch catabolic process1.40E-03
33GO:0006006: glucose metabolic process1.52E-03
34GO:0009266: response to temperature stimulus1.65E-03
35GO:0007017: microtubule-based process2.19E-03
36GO:0019748: secondary metabolic process2.48E-03
37GO:0035428: hexose transmembrane transport2.48E-03
38GO:0006012: galactose metabolic process2.63E-03
39GO:0046323: glucose import3.25E-03
40GO:0008654: phospholipid biosynthetic process3.59E-03
41GO:0009627: systemic acquired resistance5.21E-03
42GO:0015995: chlorophyll biosynthetic process5.40E-03
43GO:0006397: mRNA processing5.41E-03
44GO:0005975: carbohydrate metabolic process5.45E-03
45GO:0045087: innate immune response6.82E-03
46GO:0006631: fatty acid metabolic process7.69E-03
47GO:0006508: proteolysis1.33E-02
48GO:0009451: RNA modification1.92E-02
49GO:0009409: response to cold2.53E-02
50GO:0042254: ribosome biogenesis2.62E-02
51GO:0015979: photosynthesis3.31E-02
52GO:0032259: methylation3.85E-02
53GO:0006629: lipid metabolic process3.97E-02
RankGO TermAdjusted P value
1GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
2GO:0005048: signal sequence binding0.00E+00
3GO:0004076: biotin synthase activity0.00E+00
4GO:0004645: phosphorylase activity3.37E-05
5GO:0005080: protein kinase C binding3.37E-05
6GO:0005344: oxygen transporter activity3.37E-05
7GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.37E-05
8GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.37E-05
9GO:0008184: glycogen phosphorylase activity3.37E-05
10GO:0008444: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity3.37E-05
11GO:0017169: CDP-alcohol phosphatidyltransferase activity3.37E-05
12GO:0004829: threonine-tRNA ligase activity8.48E-05
13GO:0004614: phosphoglucomutase activity8.48E-05
14GO:0019156: isoamylase activity8.48E-05
15GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.48E-05
16GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity8.48E-05
17GO:0030267: glyoxylate reductase (NADP) activity1.47E-04
18GO:0070402: NADPH binding1.47E-04
19GO:0004148: dihydrolipoyl dehydrogenase activity1.47E-04
20GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.95E-04
21GO:0001053: plastid sigma factor activity2.95E-04
22GO:0016987: sigma factor activity2.95E-04
23GO:0008374: O-acyltransferase activity3.77E-04
24GO:0004556: alpha-amylase activity4.63E-04
25GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.53E-04
26GO:0005337: nucleoside transmembrane transporter activity7.44E-04
27GO:0008312: 7S RNA binding7.44E-04
28GO:0004034: aldose 1-epimerase activity7.44E-04
29GO:0003729: mRNA binding9.70E-04
30GO:0030170: pyridoxal phosphate binding1.50E-03
31GO:0031072: heat shock protein binding1.52E-03
32GO:0008266: poly(U) RNA binding1.65E-03
33GO:0022891: substrate-specific transmembrane transporter activity2.63E-03
34GO:0003756: protein disulfide isomerase activity2.78E-03
35GO:0005355: glucose transmembrane transporter activity3.42E-03
36GO:0016853: isomerase activity3.42E-03
37GO:0005200: structural constituent of cytoskeleton4.46E-03
38GO:0008483: transaminase activity4.46E-03
39GO:0008237: metallopeptidase activity4.46E-03
40GO:0003924: GTPase activity5.18E-03
41GO:0004721: phosphoprotein phosphatase activity5.40E-03
42GO:0004222: metalloendopeptidase activity6.20E-03
43GO:0030145: manganese ion binding6.40E-03
44GO:0051539: 4 iron, 4 sulfur cluster binding7.47E-03
45GO:0004185: serine-type carboxypeptidase activity8.14E-03
46GO:0051537: 2 iron, 2 sulfur cluster binding8.60E-03
47GO:0051287: NAD binding9.30E-03
48GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.00E-02
49GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.15E-02
50GO:0003723: RNA binding1.19E-02
51GO:0051082: unfolded protein binding1.28E-02
52GO:0019843: rRNA binding1.51E-02
53GO:0005525: GTP binding1.52E-02
54GO:0015144: carbohydrate transmembrane transporter activity1.71E-02
55GO:0005351: sugar:proton symporter activity1.86E-02
56GO:0008168: methyltransferase activity2.51E-02
57GO:0000287: magnesium ion binding2.55E-02
58GO:0003735: structural constituent of ribosome3.71E-02
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Gene type



Gene DE type