Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G25000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051553: flavone biosynthetic process0.00E+00
2GO:0010398: xylogalacturonan metabolic process0.00E+00
3GO:0006497: protein lipidation0.00E+00
4GO:0072722: response to amitrole0.00E+00
5GO:0010055: atrichoblast differentiation0.00E+00
6GO:0006216: cytidine catabolic process0.00E+00
7GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:0050832: defense response to fungus1.67E-04
10GO:1900057: positive regulation of leaf senescence2.02E-04
11GO:0016559: peroxisome fission2.55E-04
12GO:0032491: detection of molecule of fungal origin2.68E-04
13GO:0060862: negative regulation of floral organ abscission2.68E-04
14GO:0019605: butyrate metabolic process2.68E-04
15GO:0006083: acetate metabolic process2.68E-04
16GO:0032107: regulation of response to nutrient levels2.68E-04
17GO:1903648: positive regulation of chlorophyll catabolic process2.68E-04
18GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.68E-04
19GO:0033306: phytol metabolic process2.68E-04
20GO:0010045: response to nickel cation2.68E-04
21GO:0006952: defense response4.47E-04
22GO:0006032: chitin catabolic process5.26E-04
23GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.89E-04
24GO:0002240: response to molecule of oomycetes origin5.89E-04
25GO:0031349: positive regulation of defense response5.89E-04
26GO:0010115: regulation of abscisic acid biosynthetic process5.89E-04
27GO:0010042: response to manganese ion5.89E-04
28GO:0060919: auxin influx5.89E-04
29GO:0010271: regulation of chlorophyll catabolic process5.89E-04
30GO:0010541: acropetal auxin transport5.89E-04
31GO:0000266: mitochondrial fission6.94E-04
32GO:0002237: response to molecule of bacterial origin8.84E-04
33GO:0051176: positive regulation of sulfur metabolic process9.55E-04
34GO:0010272: response to silver ion9.55E-04
35GO:0002230: positive regulation of defense response to virus by host9.55E-04
36GO:0010150: leaf senescence1.13E-03
37GO:0006629: lipid metabolic process1.29E-03
38GO:1902290: positive regulation of defense response to oomycetes1.36E-03
39GO:0002239: response to oomycetes1.36E-03
40GO:0016998: cell wall macromolecule catabolic process1.46E-03
41GO:0009814: defense response, incompatible interaction1.60E-03
42GO:0006878: cellular copper ion homeostasis1.83E-03
43GO:0045227: capsule polysaccharide biosynthetic process1.83E-03
44GO:0048638: regulation of developmental growth1.83E-03
45GO:0045088: regulation of innate immune response1.83E-03
46GO:0033358: UDP-L-arabinose biosynthetic process1.83E-03
47GO:0033356: UDP-L-arabinose metabolic process1.83E-03
48GO:0007165: signal transduction1.85E-03
49GO:0015031: protein transport1.86E-03
50GO:0042391: regulation of membrane potential2.21E-03
51GO:0005513: detection of calcium ion2.33E-03
52GO:0031365: N-terminal protein amino acid modification2.33E-03
53GO:0006097: glyoxylate cycle2.33E-03
54GO:0009229: thiamine diphosphate biosynthetic process2.33E-03
55GO:0009435: NAD biosynthetic process2.33E-03
56GO:0016094: polyprenol biosynthetic process2.33E-03
57GO:0030308: negative regulation of cell growth2.33E-03
58GO:0000304: response to singlet oxygen2.33E-03
59GO:0006564: L-serine biosynthetic process2.33E-03
60GO:0009620: response to fungus2.66E-03
61GO:0002238: response to molecule of fungal origin2.88E-03
62GO:0009972: cytidine deamination2.88E-03
63GO:0010942: positive regulation of cell death2.88E-03
64GO:0010315: auxin efflux2.88E-03
65GO:0006139: nucleobase-containing compound metabolic process2.88E-03
66GO:0009228: thiamine biosynthetic process2.88E-03
67GO:0009117: nucleotide metabolic process2.88E-03
68GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.46E-03
69GO:0030643: cellular phosphate ion homeostasis3.46E-03
70GO:0009612: response to mechanical stimulus3.46E-03
71GO:0006914: autophagy3.56E-03
72GO:0010038: response to metal ion4.08E-03
73GO:0009610: response to symbiotic fungus4.08E-03
74GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.08E-03
75GO:0006886: intracellular protein transport4.20E-03
76GO:0009615: response to virus4.25E-03
77GO:0006102: isocitrate metabolic process4.73E-03
78GO:0009850: auxin metabolic process4.73E-03
79GO:0016311: dephosphorylation5.26E-03
80GO:0016042: lipid catabolic process5.27E-03
81GO:0010204: defense response signaling pathway, resistance gene-independent5.42E-03
82GO:0007338: single fertilization6.14E-03
83GO:0019432: triglyceride biosynthetic process6.14E-03
84GO:0010043: response to zinc ion6.40E-03
85GO:0007568: aging6.40E-03
86GO:0048527: lateral root development6.40E-03
87GO:0008202: steroid metabolic process6.90E-03
88GO:1900426: positive regulation of defense response to bacterium6.90E-03
89GO:0048268: clathrin coat assembly6.90E-03
90GO:0010380: regulation of chlorophyll biosynthetic process6.90E-03
91GO:0000272: polysaccharide catabolic process8.50E-03
92GO:0048229: gametophyte development8.50E-03
93GO:0030148: sphingolipid biosynthetic process8.50E-03
94GO:0009682: induced systemic resistance8.50E-03
95GO:0042542: response to hydrogen peroxide8.70E-03
96GO:0051707: response to other organism9.06E-03
97GO:0071365: cellular response to auxin stimulus9.35E-03
98GO:0045037: protein import into chloroplast stroma9.35E-03
99GO:0055114: oxidation-reduction process1.08E-02
100GO:0010540: basipetal auxin transport1.11E-02
101GO:0034605: cellular response to heat1.11E-02
102GO:0009846: pollen germination1.14E-02
103GO:0070588: calcium ion transmembrane transport1.21E-02
104GO:0009225: nucleotide-sugar metabolic process1.21E-02
105GO:0006486: protein glycosylation1.22E-02
106GO:0034976: response to endoplasmic reticulum stress1.30E-02
107GO:0080147: root hair cell development1.40E-02
108GO:0010073: meristem maintenance1.50E-02
109GO:0007005: mitochondrion organization1.71E-02
110GO:0071456: cellular response to hypoxia1.71E-02
111GO:0030245: cellulose catabolic process1.71E-02
112GO:0016226: iron-sulfur cluster assembly1.71E-02
113GO:0006012: galactose metabolic process1.82E-02
114GO:0010584: pollen exine formation1.94E-02
115GO:0006284: base-excision repair1.94E-02
116GO:0042147: retrograde transport, endosome to Golgi2.05E-02
117GO:0070417: cellular response to cold2.05E-02
118GO:0045489: pectin biosynthetic process2.29E-02
119GO:0071472: cellular response to salt stress2.29E-02
120GO:0006885: regulation of pH2.29E-02
121GO:0006623: protein targeting to vacuole2.53E-02
122GO:0008152: metabolic process2.54E-02
123GO:0002229: defense response to oomycetes2.65E-02
124GO:0010193: response to ozone2.65E-02
125GO:0009630: gravitropism2.78E-02
126GO:0030163: protein catabolic process2.91E-02
127GO:0009567: double fertilization forming a zygote and endosperm3.04E-02
128GO:0051607: defense response to virus3.31E-02
129GO:0007166: cell surface receptor signaling pathway3.45E-02
130GO:0006470: protein dephosphorylation3.45E-02
131GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.59E-02
132GO:0009816: defense response to bacterium, incompatible interaction3.59E-02
133GO:0071555: cell wall organization3.73E-02
134GO:0009627: systemic acquired resistance3.73E-02
135GO:0042742: defense response to bacterium3.73E-02
136GO:0006974: cellular response to DNA damage stimulus3.73E-02
137GO:0009817: defense response to fungus, incompatible interaction4.17E-02
138GO:0030244: cellulose biosynthetic process4.17E-02
139GO:0048767: root hair elongation4.32E-02
140GO:0009813: flavonoid biosynthetic process4.32E-02
141GO:0009832: plant-type cell wall biogenesis4.32E-02
142GO:0009407: toxin catabolic process4.47E-02
RankGO TermAdjusted P value
1GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
2GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
3GO:0018580: nitronate monooxygenase activity0.00E+00
4GO:0019205: nucleobase-containing compound kinase activity0.00E+00
5GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
6GO:0033759: flavone synthase activity0.00E+00
7GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
8GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
9GO:0008734: L-aspartate oxidase activity0.00E+00
10GO:0047844: deoxycytidine deaminase activity0.00E+00
11GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
12GO:0005212: structural constituent of eye lens0.00E+00
13GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
14GO:0050334: thiaminase activity0.00E+00
15GO:0019779: Atg8 activating enzyme activity3.29E-06
16GO:0004806: triglyceride lipase activity5.75E-05
17GO:0005496: steroid binding7.68E-05
18GO:0070696: transmembrane receptor protein serine/threonine kinase binding7.68E-05
19GO:0004714: transmembrane receptor protein tyrosine kinase activity2.55E-04
20GO:0004649: poly(ADP-ribose) glycohydrolase activity2.68E-04
21GO:0003987: acetate-CoA ligase activity2.68E-04
22GO:0047760: butyrate-CoA ligase activity2.68E-04
23GO:0019786: Atg8-specific protease activity2.68E-04
24GO:0008970: phosphatidylcholine 1-acylhydrolase activity3.14E-04
25GO:0016791: phosphatase activity4.03E-04
26GO:0004568: chitinase activity5.26E-04
27GO:0004385: guanylate kinase activity5.89E-04
28GO:0052739: phosphatidylserine 1-acylhydrolase activity5.89E-04
29GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity5.89E-04
30GO:0004617: phosphoglycerate dehydrogenase activity5.89E-04
31GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity5.89E-04
32GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity5.89E-04
33GO:0032934: sterol binding5.89E-04
34GO:1990585: hydroxyproline O-arabinosyltransferase activity5.89E-04
35GO:0045140: inositol phosphoceramide synthase activity5.89E-04
36GO:0000030: mannosyltransferase activity9.55E-04
37GO:0000975: regulatory region DNA binding9.55E-04
38GO:0003955: NAD(P)H dehydrogenase (quinone) activity9.55E-04
39GO:0004190: aspartic-type endopeptidase activity9.87E-04
40GO:0030552: cAMP binding9.87E-04
41GO:0030553: cGMP binding9.87E-04
42GO:0005216: ion channel activity1.33E-03
43GO:0035529: NADH pyrophosphatase activity1.36E-03
44GO:0004449: isocitrate dehydrogenase (NAD+) activity1.36E-03
45GO:0010178: IAA-amino acid conjugate hydrolase activity1.36E-03
46GO:0050373: UDP-arabinose 4-epimerase activity1.83E-03
47GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.83E-03
48GO:0010328: auxin influx transmembrane transporter activity1.83E-03
49GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.83E-03
50GO:0019776: Atg8 ligase activity1.83E-03
51GO:0005249: voltage-gated potassium channel activity2.21E-03
52GO:0030551: cyclic nucleotide binding2.21E-03
53GO:0047631: ADP-ribose diphosphatase activity2.33E-03
54GO:0008725: DNA-3-methyladenine glycosylase activity2.33E-03
55GO:0008374: O-acyltransferase activity2.33E-03
56GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.33E-03
57GO:0002094: polyprenyltransferase activity2.33E-03
58GO:0047714: galactolipase activity2.88E-03
59GO:0000210: NAD+ diphosphatase activity2.88E-03
60GO:0016208: AMP binding2.88E-03
61GO:0035252: UDP-xylosyltransferase activity2.88E-03
62GO:0051920: peroxiredoxin activity3.46E-03
63GO:0004126: cytidine deaminase activity3.46E-03
64GO:0003978: UDP-glucose 4-epimerase activity3.46E-03
65GO:0004144: diacylglycerol O-acyltransferase activity3.46E-03
66GO:0008235: metalloexopeptidase activity4.08E-03
67GO:0008320: protein transmembrane transporter activity4.08E-03
68GO:0051213: dioxygenase activity4.25E-03
69GO:0004722: protein serine/threonine phosphatase activity4.60E-03
70GO:0004708: MAP kinase kinase activity4.73E-03
71GO:0016209: antioxidant activity4.73E-03
72GO:0004033: aldo-keto reductase (NADP) activity4.73E-03
73GO:0004721: phosphoprotein phosphatase activity5.00E-03
74GO:0008142: oxysterol binding5.42E-03
75GO:0004630: phospholipase D activity5.42E-03
76GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity5.42E-03
77GO:0016787: hydrolase activity5.80E-03
78GO:0071949: FAD binding6.14E-03
79GO:0030955: potassium ion binding6.90E-03
80GO:0004743: pyruvate kinase activity6.90E-03
81GO:0008194: UDP-glycosyltransferase activity6.90E-03
82GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.02E-03
83GO:0005545: 1-phosphatidylinositol binding7.68E-03
84GO:0008047: enzyme activator activity7.68E-03
85GO:0015020: glucuronosyltransferase activity7.68E-03
86GO:0004713: protein tyrosine kinase activity7.68E-03
87GO:0004177: aminopeptidase activity8.50E-03
88GO:0008559: xenobiotic-transporting ATPase activity8.50E-03
89GO:0005388: calcium-transporting ATPase activity1.02E-02
90GO:0010329: auxin efflux transmembrane transporter activity1.02E-02
91GO:0046872: metal ion binding1.03E-02
92GO:0004601: peroxidase activity1.04E-02
93GO:0051287: NAD binding1.10E-02
94GO:0008061: chitin binding1.21E-02
95GO:0004725: protein tyrosine phosphatase activity1.30E-02
96GO:0016301: kinase activity1.34E-02
97GO:0001046: core promoter sequence-specific DNA binding1.40E-02
98GO:0080043: quercetin 3-O-glucosyltransferase activity1.59E-02
99GO:0080044: quercetin 7-O-glucosyltransferase activity1.59E-02
100GO:0008810: cellulase activity1.82E-02
101GO:0003756: protein disulfide isomerase activity1.94E-02
102GO:0004499: N,N-dimethylaniline monooxygenase activity1.94E-02
103GO:0005102: receptor binding2.05E-02
104GO:0005451: monovalent cation:proton antiporter activity2.17E-02
105GO:0005515: protein binding2.18E-02
106GO:0030276: clathrin binding2.29E-02
107GO:0015299: solute:proton antiporter activity2.41E-02
108GO:0010181: FMN binding2.41E-02
109GO:0004252: serine-type endopeptidase activity2.43E-02
110GO:0015385: sodium:proton antiporter activity2.91E-02
111GO:0016722: oxidoreductase activity, oxidizing metal ions3.18E-02
112GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.18E-02
113GO:0008237: metallopeptidase activity3.18E-02
114GO:0016597: amino acid binding3.31E-02
115GO:0005509: calcium ion binding3.32E-02
116GO:0016887: ATPase activity3.87E-02
117GO:0030247: polysaccharide binding3.88E-02
118GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.02E-02
119GO:0003824: catalytic activity4.27E-02
120GO:0030145: manganese ion binding4.62E-02
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Gene type



Gene DE type