Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G24270

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034337: RNA folding0.00E+00
2GO:0006982: response to lipid hydroperoxide0.00E+00
3GO:0002184: cytoplasmic translational termination0.00E+00
4GO:0010335: response to non-ionic osmotic stress0.00E+00
5GO:1901918: negative regulation of exoribonuclease activity0.00E+00
6GO:0016553: base conversion or substitution editing0.00E+00
7GO:0090279: regulation of calcium ion import0.00E+00
8GO:0015717: triose phosphate transport0.00E+00
9GO:0005996: monosaccharide metabolic process0.00E+00
10GO:0071474: cellular hyperosmotic response0.00E+00
11GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
12GO:0015995: chlorophyll biosynthetic process1.07E-12
13GO:0055114: oxidation-reduction process1.85E-10
14GO:0006094: gluconeogenesis9.58E-07
15GO:0019253: reductive pentose-phosphate cycle1.28E-06
16GO:0015979: photosynthesis2.18E-06
17GO:0030388: fructose 1,6-bisphosphate metabolic process3.29E-06
18GO:0006000: fructose metabolic process1.18E-05
19GO:0019252: starch biosynthetic process1.72E-05
20GO:0009735: response to cytokinin2.99E-05
21GO:0006096: glycolytic process4.02E-05
22GO:0010027: thylakoid membrane organization4.19E-05
23GO:0006546: glycine catabolic process4.83E-05
24GO:0010021: amylopectin biosynthetic process4.83E-05
25GO:0010207: photosystem II assembly5.12E-05
26GO:0009854: oxidative photosynthetic carbon pathway1.53E-04
27GO:0006633: fatty acid biosynthetic process1.60E-04
28GO:0009772: photosynthetic electron transport in photosystem II2.02E-04
29GO:0016559: peroxisome fission2.55E-04
30GO:0048564: photosystem I assembly2.55E-04
31GO:0009704: de-etiolation2.55E-04
32GO:0046167: glycerol-3-phosphate biosynthetic process2.68E-04
33GO:1902458: positive regulation of stomatal opening2.68E-04
34GO:0015969: guanosine tetraphosphate metabolic process2.68E-04
35GO:0009090: homoserine biosynthetic process2.68E-04
36GO:1902478: negative regulation of defense response to bacterium, incompatible interaction2.68E-04
37GO:0043489: RNA stabilization2.68E-04
38GO:1904966: positive regulation of vitamin E biosynthetic process2.68E-04
39GO:0043953: protein transport by the Tat complex2.68E-04
40GO:0000481: maturation of 5S rRNA2.68E-04
41GO:1904964: positive regulation of phytol biosynthetic process2.68E-04
42GO:0065002: intracellular protein transmembrane transport2.68E-04
43GO:0043686: co-translational protein modification2.68E-04
44GO:0051775: response to redox state2.68E-04
45GO:0071277: cellular response to calcium ion2.68E-04
46GO:0006002: fructose 6-phosphate metabolic process3.14E-04
47GO:0032544: plastid translation3.14E-04
48GO:0006783: heme biosynthetic process3.80E-04
49GO:0009658: chloroplast organization4.45E-04
50GO:0006779: porphyrin-containing compound biosynthetic process4.50E-04
51GO:0006782: protoporphyrinogen IX biosynthetic process5.26E-04
52GO:1903426: regulation of reactive oxygen species biosynthetic process5.89E-04
53GO:0051262: protein tetramerization5.89E-04
54GO:0042819: vitamin B6 biosynthetic process5.89E-04
55GO:1902326: positive regulation of chlorophyll biosynthetic process5.89E-04
56GO:0006650: glycerophospholipid metabolic process5.89E-04
57GO:0009773: photosynthetic electron transport in photosystem I6.07E-04
58GO:0018119: peptidyl-cysteine S-nitrosylation6.07E-04
59GO:0005986: sucrose biosynthetic process7.86E-04
60GO:0006006: glucose metabolic process7.86E-04
61GO:0005975: carbohydrate metabolic process8.72E-04
62GO:0009853: photorespiration9.53E-04
63GO:0034051: negative regulation of plant-type hypersensitive response9.55E-04
64GO:0046168: glycerol-3-phosphate catabolic process9.55E-04
65GO:0035436: triose phosphate transmembrane transport9.55E-04
66GO:0044375: regulation of peroxisome size9.55E-04
67GO:0006636: unsaturated fatty acid biosynthetic process1.10E-03
68GO:0009067: aspartate family amino acid biosynthetic process1.36E-03
69GO:0006020: inositol metabolic process1.36E-03
70GO:0009152: purine ribonucleotide biosynthetic process1.36E-03
71GO:0046653: tetrahydrofolate metabolic process1.36E-03
72GO:0006107: oxaloacetate metabolic process1.36E-03
73GO:0009052: pentose-phosphate shunt, non-oxidative branch1.36E-03
74GO:0033014: tetrapyrrole biosynthetic process1.36E-03
75GO:0008615: pyridoxine biosynthetic process1.36E-03
76GO:0006072: glycerol-3-phosphate metabolic process1.36E-03
77GO:0010731: protein glutathionylation1.36E-03
78GO:0042823: pyridoxal phosphate biosynthetic process1.36E-03
79GO:0019464: glycine decarboxylation via glycine cleavage system1.83E-03
80GO:0045727: positive regulation of translation1.83E-03
81GO:0015994: chlorophyll metabolic process1.83E-03
82GO:0010600: regulation of auxin biosynthetic process1.83E-03
83GO:0006021: inositol biosynthetic process1.83E-03
84GO:0006734: NADH metabolic process1.83E-03
85GO:0015713: phosphoglycerate transport1.83E-03
86GO:0009409: response to cold2.14E-03
87GO:0042631: cellular response to water deprivation2.21E-03
88GO:0000304: response to singlet oxygen2.33E-03
89GO:0006564: L-serine biosynthetic process2.33E-03
90GO:0010236: plastoquinone biosynthetic process2.33E-03
91GO:0045038: protein import into chloroplast thylakoid membrane2.33E-03
92GO:0031365: N-terminal protein amino acid modification2.33E-03
93GO:0006412: translation2.55E-03
94GO:0010304: PSII associated light-harvesting complex II catabolic process2.88E-03
95GO:0042549: photosystem II stabilization2.88E-03
96GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.88E-03
97GO:0000470: maturation of LSU-rRNA2.88E-03
98GO:0006655: phosphatidylglycerol biosynthetic process2.88E-03
99GO:0045962: positive regulation of development, heterochronic2.88E-03
100GO:0009643: photosynthetic acclimation2.88E-03
101GO:0006014: D-ribose metabolic process2.88E-03
102GO:0046855: inositol phosphate dephosphorylation2.88E-03
103GO:0046686: response to cadmium ion2.91E-03
104GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.46E-03
105GO:0044550: secondary metabolite biosynthetic process3.46E-03
106GO:1901259: chloroplast rRNA processing3.46E-03
107GO:0009088: threonine biosynthetic process3.46E-03
108GO:0010161: red light signaling pathway4.08E-03
109GO:0006400: tRNA modification4.08E-03
110GO:0010928: regulation of auxin mediated signaling pathway4.73E-03
111GO:0008610: lipid biosynthetic process4.73E-03
112GO:0005978: glycogen biosynthetic process4.73E-03
113GO:0032508: DNA duplex unwinding4.73E-03
114GO:2000070: regulation of response to water deprivation4.73E-03
115GO:2000031: regulation of salicylic acid mediated signaling pathway5.42E-03
116GO:0009932: cell tip growth5.42E-03
117GO:0071482: cellular response to light stimulus5.42E-03
118GO:0015996: chlorophyll catabolic process5.42E-03
119GO:0007186: G-protein coupled receptor signaling pathway5.42E-03
120GO:0009657: plastid organization5.42E-03
121GO:0010206: photosystem II repair6.14E-03
122GO:0006098: pentose-phosphate shunt6.14E-03
123GO:0090333: regulation of stomatal closure6.14E-03
124GO:0006754: ATP biosynthetic process6.14E-03
125GO:0005982: starch metabolic process6.90E-03
126GO:0010205: photoinhibition6.90E-03
127GO:0010267: production of ta-siRNAs involved in RNA interference6.90E-03
128GO:0009086: methionine biosynthetic process6.90E-03
129GO:0016051: carbohydrate biosynthetic process7.02E-03
130GO:0006535: cysteine biosynthetic process from serine7.68E-03
131GO:0006631: fatty acid metabolic process8.35E-03
132GO:0019684: photosynthesis, light reaction8.50E-03
133GO:0009089: lysine biosynthetic process via diaminopimelate8.50E-03
134GO:0072593: reactive oxygen species metabolic process8.50E-03
135GO:0000272: polysaccharide catabolic process8.50E-03
136GO:0009744: response to sucrose9.06E-03
137GO:0006790: sulfur compound metabolic process9.35E-03
138GO:0002213: defense response to insect9.35E-03
139GO:0016024: CDP-diacylglycerol biosynthetic process9.35E-03
140GO:0045037: protein import into chloroplast stroma9.35E-03
141GO:0018107: peptidyl-threonine phosphorylation1.02E-02
142GO:0009718: anthocyanin-containing compound biosynthetic process1.02E-02
143GO:0030048: actin filament-based movement1.02E-02
144GO:0009636: response to toxic substance1.02E-02
145GO:0006108: malate metabolic process1.02E-02
146GO:0042254: ribosome biogenesis1.07E-02
147GO:0009266: response to temperature stimulus1.11E-02
148GO:0010020: chloroplast fission1.11E-02
149GO:0007031: peroxisome organization1.21E-02
150GO:0042742: defense response to bacterium1.21E-02
151GO:0005985: sucrose metabolic process1.21E-02
152GO:0046854: phosphatidylinositol phosphorylation1.21E-02
153GO:0006364: rRNA processing1.22E-02
154GO:0019762: glucosinolate catabolic process1.30E-02
155GO:0019344: cysteine biosynthetic process1.40E-02
156GO:0000027: ribosomal large subunit assembly1.40E-02
157GO:0006406: mRNA export from nucleus1.40E-02
158GO:0006289: nucleotide-excision repair1.40E-02
159GO:0008299: isoprenoid biosynthetic process1.50E-02
160GO:0009695: jasmonic acid biosynthetic process1.50E-02
161GO:0007017: microtubule-based process1.50E-02
162GO:0048511: rhythmic process1.61E-02
163GO:0010431: seed maturation1.61E-02
164GO:0061077: chaperone-mediated protein folding1.61E-02
165GO:0031408: oxylipin biosynthetic process1.61E-02
166GO:0016226: iron-sulfur cluster assembly1.71E-02
167GO:0010017: red or far-red light signaling pathway1.71E-02
168GO:2000022: regulation of jasmonic acid mediated signaling pathway1.71E-02
169GO:0035428: hexose transmembrane transport1.71E-02
170GO:0006396: RNA processing1.80E-02
171GO:0006817: phosphate ion transport1.94E-02
172GO:0046323: glucose import2.29E-02
173GO:0009741: response to brassinosteroid2.29E-02
174GO:0006520: cellular amino acid metabolic process2.29E-02
175GO:0010182: sugar mediated signaling pathway2.29E-02
176GO:0006397: mRNA processing2.37E-02
177GO:0009646: response to absence of light2.41E-02
178GO:0015986: ATP synthesis coupled proton transport2.41E-02
179GO:0042744: hydrogen peroxide catabolic process2.49E-02
180GO:0009791: post-embryonic development2.53E-02
181GO:0008654: phospholipid biosynthetic process2.53E-02
182GO:0000302: response to reactive oxygen species2.65E-02
183GO:0031047: gene silencing by RNA2.78E-02
184GO:0030163: protein catabolic process2.91E-02
185GO:0007623: circadian rhythm3.02E-02
186GO:0009567: double fertilization forming a zygote and endosperm3.04E-02
187GO:0051607: defense response to virus3.31E-02
188GO:0042128: nitrate assimilation3.73E-02
189GO:0009817: defense response to fungus, incompatible interaction4.17E-02
190GO:0018298: protein-chromophore linkage4.17E-02
191GO:0009813: flavonoid biosynthetic process4.32E-02
192GO:0009407: toxin catabolic process4.47E-02
193GO:0009416: response to light stimulus4.57E-02
194GO:0007568: aging4.62E-02
195GO:0009631: cold acclimation4.62E-02
196GO:0045087: innate immune response4.93E-02
RankGO TermAdjusted P value
1GO:0004768: stearoyl-CoA 9-desaturase activity0.00E+00
2GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
3GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
4GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
5GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
6GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
7GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
8GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
9GO:0008887: glycerate kinase activity0.00E+00
10GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
11GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
12GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
13GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
14GO:0008465: glycerate dehydrogenase activity0.00E+00
15GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
16GO:0019843: rRNA binding2.81E-08
17GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity3.29E-06
18GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity3.29E-06
19GO:0016851: magnesium chelatase activity2.67E-05
20GO:0008266: poly(U) RNA binding5.12E-05
21GO:0004332: fructose-bisphosphate aldolase activity1.12E-04
22GO:0016491: oxidoreductase activity1.69E-04
23GO:0051287: NAD binding2.35E-04
24GO:0035671: enone reductase activity2.68E-04
25GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity2.68E-04
26GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity2.68E-04
27GO:0005227: calcium activated cation channel activity2.68E-04
28GO:0004325: ferrochelatase activity2.68E-04
29GO:0008746: NAD(P)+ transhydrogenase activity2.68E-04
30GO:0004853: uroporphyrinogen decarboxylase activity2.68E-04
31GO:0042586: peptide deformylase activity2.68E-04
32GO:0010297: heteropolysaccharide binding5.89E-04
33GO:0009977: proton motive force dependent protein transmembrane transporter activity5.89E-04
34GO:0004617: phosphoglycerate dehydrogenase activity5.89E-04
35GO:0004047: aminomethyltransferase activity5.89E-04
36GO:0052832: inositol monophosphate 3-phosphatase activity5.89E-04
37GO:0033201: alpha-1,4-glucan synthase activity5.89E-04
38GO:0018708: thiol S-methyltransferase activity5.89E-04
39GO:0003844: 1,4-alpha-glucan branching enzyme activity5.89E-04
40GO:0016630: protochlorophyllide reductase activity5.89E-04
41GO:0008934: inositol monophosphate 1-phosphatase activity5.89E-04
42GO:0052833: inositol monophosphate 4-phosphatase activity5.89E-04
43GO:0008728: GTP diphosphokinase activity5.89E-04
44GO:0004412: homoserine dehydrogenase activity5.89E-04
45GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity5.89E-04
46GO:0050017: L-3-cyanoalanine synthase activity5.89E-04
47GO:0042389: omega-3 fatty acid desaturase activity5.89E-04
48GO:0031072: heat shock protein binding7.86E-04
49GO:0004565: beta-galactosidase activity7.86E-04
50GO:0071917: triose-phosphate transmembrane transporter activity9.55E-04
51GO:0008864: formyltetrahydrofolate deformylase activity9.55E-04
52GO:0005504: fatty acid binding9.55E-04
53GO:0043169: cation binding9.55E-04
54GO:0004373: glycogen (starch) synthase activity9.55E-04
55GO:0003955: NAD(P)H dehydrogenase (quinone) activity9.55E-04
56GO:0004751: ribose-5-phosphate isomerase activity9.55E-04
57GO:0016742: hydroxymethyl-, formyl- and related transferase activity9.55E-04
58GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity9.55E-04
59GO:0070402: NADPH binding9.55E-04
60GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.36E-03
61GO:0004072: aspartate kinase activity1.36E-03
62GO:0004375: glycine dehydrogenase (decarboxylating) activity1.36E-03
63GO:0043023: ribosomal large subunit binding1.36E-03
64GO:0003735: structural constituent of ribosome1.66E-03
65GO:0070628: proteasome binding1.83E-03
66GO:0045430: chalcone isomerase activity1.83E-03
67GO:0009011: starch synthase activity1.83E-03
68GO:0043495: protein anchor1.83E-03
69GO:0015120: phosphoglycerate transmembrane transporter activity1.83E-03
70GO:0003959: NADPH dehydrogenase activity2.33E-03
71GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.33E-03
72GO:0005525: GTP binding2.46E-03
73GO:0031593: polyubiquitin binding2.88E-03
74GO:0004130: cytochrome-c peroxidase activity2.88E-03
75GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.88E-03
76GO:0042578: phosphoric ester hydrolase activity2.88E-03
77GO:0016615: malate dehydrogenase activity2.88E-03
78GO:0003723: RNA binding3.21E-03
79GO:0004124: cysteine synthase activity3.46E-03
80GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.46E-03
81GO:0004747: ribokinase activity3.46E-03
82GO:0030060: L-malate dehydrogenase activity3.46E-03
83GO:0005261: cation channel activity3.46E-03
84GO:0016597: amino acid binding4.01E-03
85GO:0019899: enzyme binding4.08E-03
86GO:0004033: aldo-keto reductase (NADP) activity4.73E-03
87GO:0008865: fructokinase activity4.73E-03
88GO:0008135: translation factor activity, RNA binding5.42E-03
89GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.42E-03
90GO:0004222: metalloendopeptidase activity6.11E-03
91GO:0071949: FAD binding6.14E-03
92GO:0004743: pyruvate kinase activity6.90E-03
93GO:0030955: potassium ion binding6.90E-03
94GO:0003746: translation elongation factor activity7.02E-03
95GO:0030234: enzyme regulator activity7.68E-03
96GO:0050661: NADP binding8.01E-03
97GO:0042802: identical protein binding8.11E-03
98GO:0004364: glutathione transferase activity8.70E-03
99GO:0005198: structural molecule activity1.02E-02
100GO:0005315: inorganic phosphate transmembrane transporter activity1.02E-02
101GO:0004601: peroxidase activity1.04E-02
102GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.06E-02
103GO:0016887: ATPase activity1.07E-02
104GO:0003774: motor activity1.11E-02
105GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.11E-02
106GO:0051536: iron-sulfur cluster binding1.40E-02
107GO:0043130: ubiquitin binding1.40E-02
108GO:0005528: FK506 binding1.40E-02
109GO:0004176: ATP-dependent peptidase activity1.61E-02
110GO:0051082: unfolded protein binding1.75E-02
111GO:0022891: substrate-specific transmembrane transporter activity1.82E-02
112GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.90E-02
113GO:0003727: single-stranded RNA binding1.94E-02
114GO:0005515: protein binding2.18E-02
115GO:0003924: GTPase activity2.24E-02
116GO:0046933: proton-transporting ATP synthase activity, rotational mechanism2.29E-02
117GO:0003729: mRNA binding2.39E-02
118GO:0016853: isomerase activity2.41E-02
119GO:0005355: glucose transmembrane transporter activity2.41E-02
120GO:0050662: coenzyme binding2.41E-02
121GO:0020037: heme binding2.63E-02
122GO:0048038: quinone binding2.65E-02
123GO:0003684: damaged DNA binding3.04E-02
124GO:0008483: transaminase activity3.18E-02
125GO:0016722: oxidoreductase activity, oxidizing metal ions3.18E-02
126GO:0005200: structural constituent of cytoskeleton3.18E-02
127GO:0008237: metallopeptidase activity3.18E-02
128GO:0016168: chlorophyll binding3.59E-02
129GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.02E-02
130GO:0008168: methyltransferase activity4.49E-02
131GO:0030145: manganese ion binding4.62E-02
132GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.62E-02
133GO:0016788: hydrolase activity, acting on ester bonds4.74E-02
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Gene type



Gene DE type