Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G24230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
2GO:0017038: protein import0.00E+00
3GO:0007037: vacuolar phosphate transport0.00E+00
4GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
5GO:0031116: positive regulation of microtubule polymerization0.00E+00
6GO:0010068: protoderm histogenesis0.00E+00
7GO:0042407: cristae formation0.00E+00
8GO:0042817: pyridoxal metabolic process0.00E+00
9GO:0031129: inductive cell-cell signaling0.00E+00
10GO:0006399: tRNA metabolic process0.00E+00
11GO:0006429: leucyl-tRNA aminoacylation0.00E+00
12GO:1905421: regulation of plant organ morphogenesis0.00E+00
13GO:0043488: regulation of mRNA stability0.00E+00
14GO:0030155: regulation of cell adhesion0.00E+00
15GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
16GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
17GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
18GO:0009658: chloroplast organization5.52E-11
19GO:1901259: chloroplast rRNA processing2.38E-04
20GO:0010482: regulation of epidermal cell division3.55E-04
21GO:0042547: cell wall modification involved in multidimensional cell growth3.55E-04
22GO:0042371: vitamin K biosynthetic process3.55E-04
23GO:1902458: positive regulation of stomatal opening3.55E-04
24GO:0005991: trehalose metabolic process3.55E-04
25GO:0006747: FAD biosynthetic process3.55E-04
26GO:0006419: alanyl-tRNA aminoacylation3.55E-04
27GO:0000476: maturation of 4.5S rRNA3.55E-04
28GO:0000967: rRNA 5'-end processing3.55E-04
29GO:0006353: DNA-templated transcription, termination3.89E-04
30GO:0070413: trehalose metabolism in response to stress3.89E-04
31GO:0009657: plastid organization4.76E-04
32GO:1900865: chloroplast RNA modification6.73E-04
33GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole7.72E-04
34GO:0060359: response to ammonium ion7.72E-04
35GO:2000039: regulation of trichome morphogenesis7.72E-04
36GO:0007154: cell communication7.72E-04
37GO:1900033: negative regulation of trichome patterning7.72E-04
38GO:0034755: iron ion transmembrane transport7.72E-04
39GO:0006423: cysteinyl-tRNA aminoacylation7.72E-04
40GO:0042814: monopolar cell growth7.72E-04
41GO:0009220: pyrimidine ribonucleotide biosynthetic process7.72E-04
42GO:1903426: regulation of reactive oxygen species biosynthetic process7.72E-04
43GO:0010289: homogalacturonan biosynthetic process7.72E-04
44GO:0034470: ncRNA processing7.72E-04
45GO:0006739: NADP metabolic process7.72E-04
46GO:0006782: protoporphyrinogen IX biosynthetic process7.85E-04
47GO:0009089: lysine biosynthetic process via diaminopimelate9.04E-04
48GO:0006415: translational termination9.04E-04
49GO:0009627: systemic acquired resistance9.79E-04
50GO:0045037: protein import into chloroplast stroma1.03E-03
51GO:0015995: chlorophyll biosynthetic process1.05E-03
52GO:0006954: inflammatory response1.25E-03
53GO:0045604: regulation of epidermal cell differentiation1.25E-03
54GO:0001578: microtubule bundle formation1.25E-03
55GO:0045493: xylan catabolic process1.25E-03
56GO:0043157: response to cation stress1.25E-03
57GO:0030261: chromosome condensation1.25E-03
58GO:0033591: response to L-ascorbic acid1.25E-03
59GO:0048281: inflorescence morphogenesis1.25E-03
60GO:0010020: chloroplast fission1.31E-03
61GO:0019048: modulation by virus of host morphology or physiology1.80E-03
62GO:0009226: nucleotide-sugar biosynthetic process1.80E-03
63GO:0048645: animal organ formation1.80E-03
64GO:0008615: pyridoxine biosynthetic process1.80E-03
65GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.80E-03
66GO:0048530: fruit morphogenesis1.80E-03
67GO:0006164: purine nucleotide biosynthetic process1.80E-03
68GO:0031048: chromatin silencing by small RNA1.80E-03
69GO:0010148: transpiration1.80E-03
70GO:0043572: plastid fission1.80E-03
71GO:0016556: mRNA modification1.80E-03
72GO:2001141: regulation of RNA biosynthetic process1.80E-03
73GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.80E-03
74GO:0009102: biotin biosynthetic process1.80E-03
75GO:0010239: chloroplast mRNA processing1.80E-03
76GO:0005992: trehalose biosynthetic process1.82E-03
77GO:0006508: proteolysis1.92E-03
78GO:0006418: tRNA aminoacylation for protein translation2.00E-03
79GO:0006468: protein phosphorylation2.09E-03
80GO:0045490: pectin catabolic process2.13E-03
81GO:0009793: embryo development ending in seed dormancy2.41E-03
82GO:0051567: histone H3-K9 methylation2.42E-03
83GO:0007020: microtubule nucleation2.42E-03
84GO:0006734: NADH metabolic process2.42E-03
85GO:0044205: 'de novo' UMP biosynthetic process2.42E-03
86GO:0009165: nucleotide biosynthetic process2.42E-03
87GO:0048629: trichome patterning2.42E-03
88GO:0010109: regulation of photosynthesis2.42E-03
89GO:0051322: anaphase2.42E-03
90GO:0007166: cell surface receptor signaling pathway2.61E-03
91GO:0009664: plant-type cell wall organization2.95E-03
92GO:0046785: microtubule polymerization3.09E-03
93GO:0032543: mitochondrial translation3.09E-03
94GO:0010236: plastoquinone biosynthetic process3.09E-03
95GO:0045038: protein import into chloroplast thylakoid membrane3.09E-03
96GO:0010158: abaxial cell fate specification3.09E-03
97GO:0006465: signal peptide processing3.09E-03
98GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.09E-03
99GO:0016131: brassinosteroid metabolic process3.09E-03
100GO:0016554: cytidine to uridine editing3.82E-03
101GO:0032973: amino acid export3.82E-03
102GO:0016458: gene silencing3.82E-03
103GO:0009228: thiamine biosynthetic process3.82E-03
104GO:0009959: negative gravitropism3.82E-03
105GO:0006655: phosphatidylglycerol biosynthetic process3.82E-03
106GO:0006139: nucleobase-containing compound metabolic process3.82E-03
107GO:0009646: response to absence of light3.88E-03
108GO:0048444: floral organ morphogenesis4.60E-03
109GO:0009648: photoperiodism4.60E-03
110GO:0009955: adaxial/abaxial pattern specification4.60E-03
111GO:0042372: phylloquinone biosynthetic process4.60E-03
112GO:0010090: trichome morphogenesis5.07E-03
113GO:0070370: cellular heat acclimation5.44E-03
114GO:0010050: vegetative phase change5.44E-03
115GO:0010196: nonphotochemical quenching5.44E-03
116GO:0010444: guard mother cell differentiation5.44E-03
117GO:0006400: tRNA modification5.44E-03
118GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process5.44E-03
119GO:0010103: stomatal complex morphogenesis5.44E-03
120GO:0048528: post-embryonic root development5.44E-03
121GO:0009772: photosynthetic electron transport in photosystem II5.44E-03
122GO:0043090: amino acid import5.44E-03
123GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.06E-03
124GO:0009850: auxin metabolic process6.32E-03
125GO:0006605: protein targeting6.32E-03
126GO:0009704: de-etiolation6.32E-03
127GO:0042255: ribosome assembly6.32E-03
128GO:2000070: regulation of response to water deprivation6.32E-03
129GO:0045010: actin nucleation6.32E-03
130GO:0009231: riboflavin biosynthetic process6.32E-03
131GO:0052543: callose deposition in cell wall6.32E-03
132GO:0048564: photosystem I assembly6.32E-03
133GO:0010027: thylakoid membrane organization6.44E-03
134GO:0032544: plastid translation7.25E-03
135GO:0009932: cell tip growth7.25E-03
136GO:0071482: cellular response to light stimulus7.25E-03
137GO:0022900: electron transport chain7.25E-03
138GO:0001558: regulation of cell growth7.25E-03
139GO:0009827: plant-type cell wall modification7.25E-03
140GO:0006098: pentose-phosphate shunt8.22E-03
141GO:0010206: photosystem II repair8.22E-03
142GO:0080144: amino acid homeostasis8.22E-03
143GO:0006783: heme biosynthetic process8.22E-03
144GO:0000373: Group II intron splicing8.22E-03
145GO:0009790: embryo development8.23E-03
146GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.24E-03
147GO:0005982: starch metabolic process9.24E-03
148GO:0043067: regulation of programmed cell death9.24E-03
149GO:0006779: porphyrin-containing compound biosynthetic process9.24E-03
150GO:0030422: production of siRNA involved in RNA interference1.03E-02
151GO:0006949: syncytium formation1.03E-02
152GO:0016051: carbohydrate biosynthetic process1.07E-02
153GO:1903507: negative regulation of nucleic acid-templated transcription1.14E-02
154GO:0006879: cellular iron ion homeostasis1.14E-02
155GO:0006352: DNA-templated transcription, initiation1.14E-02
156GO:0009684: indoleacetic acid biosynthetic process1.14E-02
157GO:0010015: root morphogenesis1.14E-02
158GO:0019684: photosynthesis, light reaction1.14E-02
159GO:0016024: CDP-diacylglycerol biosynthetic process1.26E-02
160GO:0010582: floral meristem determinacy1.26E-02
161GO:0008380: RNA splicing1.28E-02
162GO:0030036: actin cytoskeleton organization1.38E-02
163GO:0050826: response to freezing1.38E-02
164GO:0006094: gluconeogenesis1.38E-02
165GO:0009767: photosynthetic electron transport chain1.38E-02
166GO:0010207: photosystem II assembly1.50E-02
167GO:0009965: leaf morphogenesis1.55E-02
168GO:0006855: drug transmembrane transport1.61E-02
169GO:0071732: cellular response to nitric oxide1.62E-02
170GO:0090351: seedling development1.62E-02
171GO:0010030: positive regulation of seed germination1.62E-02
172GO:0006833: water transport1.76E-02
173GO:0006364: rRNA processing1.87E-02
174GO:0007010: cytoskeleton organization1.89E-02
175GO:0009116: nucleoside metabolic process1.89E-02
176GO:0009944: polarity specification of adaxial/abaxial axis1.89E-02
177GO:0043622: cortical microtubule organization2.03E-02
178GO:0006825: copper ion transport2.03E-02
179GO:0051302: regulation of cell division2.03E-02
180GO:0006417: regulation of translation2.07E-02
181GO:0006306: DNA methylation2.17E-02
182GO:0048511: rhythmic process2.17E-02
183GO:0048367: shoot system development2.28E-02
184GO:2000022: regulation of jasmonic acid mediated signaling pathway2.31E-02
185GO:0006730: one-carbon metabolic process2.31E-02
186GO:0031348: negative regulation of defense response2.31E-02
187GO:0009814: defense response, incompatible interaction2.31E-02
188GO:0080167: response to karrikin2.33E-02
189GO:0010082: regulation of root meristem growth2.46E-02
190GO:0071369: cellular response to ethylene stimulus2.46E-02
191GO:0001944: vasculature development2.46E-02
192GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.46E-02
193GO:0010091: trichome branching2.61E-02
194GO:0009306: protein secretion2.61E-02
195GO:0000226: microtubule cytoskeleton organization2.92E-02
196GO:0000271: polysaccharide biosynthetic process2.92E-02
197GO:0042335: cuticle development2.92E-02
198GO:0008033: tRNA processing2.92E-02
199GO:0034220: ion transmembrane transport2.92E-02
200GO:0042631: cellular response to water deprivation2.92E-02
201GO:0045489: pectin biosynthetic process3.08E-02
202GO:0010197: polar nucleus fusion3.08E-02
203GO:0010182: sugar mediated signaling pathway3.08E-02
204GO:0006342: chromatin silencing3.08E-02
205GO:0009741: response to brassinosteroid3.08E-02
206GO:0008360: regulation of cell shape3.08E-02
207GO:0009958: positive gravitropism3.08E-02
208GO:0042752: regulation of circadian rhythm3.25E-02
209GO:0008654: phospholipid biosynthetic process3.41E-02
210GO:0055085: transmembrane transport3.49E-02
211GO:0000302: response to reactive oxygen species3.58E-02
212GO:0016132: brassinosteroid biosynthetic process3.58E-02
213GO:0016042: lipid catabolic process3.65E-02
214GO:0016032: viral process3.75E-02
215GO:0032502: developmental process3.75E-02
216GO:0009630: gravitropism3.75E-02
217GO:0030163: protein catabolic process3.93E-02
218GO:0071281: cellular response to iron ion3.93E-02
219GO:0009828: plant-type cell wall loosening4.11E-02
220GO:0006413: translational initiation4.27E-02
221GO:0071805: potassium ion transmembrane transport4.29E-02
222GO:0051607: defense response to virus4.47E-02
223GO:0000910: cytokinesis4.47E-02
224GO:0001666: response to hypoxia4.65E-02
225GO:0009816: defense response to bacterium, incompatible interaction4.84E-02
226GO:0005975: carbohydrate metabolic process4.93E-02
RankGO TermAdjusted P value
1GO:0043864: indoleacetamide hydrolase activity0.00E+00
2GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
3GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
4GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity0.00E+00
5GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
6GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
7GO:0004823: leucine-tRNA ligase activity0.00E+00
8GO:0004822: isoleucine-tRNA ligase activity0.00E+00
9GO:0004056: argininosuccinate lyase activity0.00E+00
10GO:0019136: deoxynucleoside kinase activity0.00E+00
11GO:0004076: biotin synthase activity0.00E+00
12GO:0003937: IMP cyclohydrolase activity0.00E+00
13GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
14GO:0030570: pectate lyase activity1.52E-05
15GO:0002161: aminoacyl-tRNA editing activity1.99E-05
16GO:0016829: lyase activity3.53E-05
17GO:0016851: magnesium chelatase activity4.39E-05
18GO:0004040: amidase activity1.22E-04
19GO:0004222: metalloendopeptidase activity1.75E-04
20GO:0004176: ATP-dependent peptidase activity2.07E-04
21GO:0004813: alanine-tRNA ligase activity3.55E-04
22GO:0004008: copper-exporting ATPase activity3.55E-04
23GO:0004853: uroporphyrinogen decarboxylase activity3.55E-04
24GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.55E-04
25GO:0052857: NADPHX epimerase activity3.55E-04
26GO:0052856: NADHX epimerase activity3.55E-04
27GO:0010285: L,L-diaminopimelate aminotransferase activity3.55E-04
28GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.55E-04
29GO:0050139: nicotinate-N-glucosyltransferase activity3.55E-04
30GO:0005227: calcium activated cation channel activity3.55E-04
31GO:0004733: pyridoxamine-phosphate oxidase activity3.55E-04
32GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.55E-04
33GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.76E-04
34GO:0003747: translation release factor activity5.70E-04
35GO:0008237: metallopeptidase activity7.37E-04
36GO:0003919: FMN adenylyltransferase activity7.72E-04
37GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase7.72E-04
38GO:0004326: tetrahydrofolylpolyglutamate synthase activity7.72E-04
39GO:0009977: proton motive force dependent protein transmembrane transporter activity7.72E-04
40GO:0004817: cysteine-tRNA ligase activity7.72E-04
41GO:0005524: ATP binding9.32E-04
42GO:0000049: tRNA binding1.03E-03
43GO:0015462: ATPase-coupled protein transmembrane transporter activity1.25E-03
44GO:0070330: aromatase activity1.25E-03
45GO:0016149: translation release factor activity, codon specific1.80E-03
46GO:0035197: siRNA binding1.80E-03
47GO:0001872: (1->3)-beta-D-glucan binding1.80E-03
48GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1.80E-03
49GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.41E-03
50GO:0009044: xylan 1,4-beta-xylosidase activity2.42E-03
51GO:0019199: transmembrane receptor protein kinase activity2.42E-03
52GO:0042277: peptide binding2.42E-03
53GO:0046556: alpha-L-arabinofuranosidase activity2.42E-03
54GO:0004659: prenyltransferase activity2.42E-03
55GO:0001053: plastid sigma factor activity2.42E-03
56GO:0004045: aminoacyl-tRNA hydrolase activity2.42E-03
57GO:0016987: sigma factor activity2.42E-03
58GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.42E-03
59GO:0016773: phosphotransferase activity, alcohol group as acceptor3.09E-03
60GO:0018685: alkane 1-monooxygenase activity3.09E-03
61GO:0004812: aminoacyl-tRNA ligase activity3.09E-03
62GO:0042578: phosphoric ester hydrolase activity3.82E-03
63GO:2001070: starch binding3.82E-03
64GO:0004605: phosphatidate cytidylyltransferase activity3.82E-03
65GO:0004332: fructose-bisphosphate aldolase activity3.82E-03
66GO:0003730: mRNA 3'-UTR binding4.60E-03
67GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.60E-03
68GO:0016791: phosphatase activity5.40E-03
69GO:0008483: transaminase activity5.73E-03
70GO:0016597: amino acid binding6.08E-03
71GO:0016301: kinase activity6.08E-03
72GO:0043022: ribosome binding6.32E-03
73GO:0019843: rRNA binding6.76E-03
74GO:0005375: copper ion transmembrane transporter activity7.25E-03
75GO:0030247: polysaccharide binding7.59E-03
76GO:0008236: serine-type peptidase activity8.00E-03
77GO:0015238: drug transmembrane transporter activity8.84E-03
78GO:0005381: iron ion transmembrane transporter activity9.24E-03
79GO:0016614: oxidoreductase activity, acting on CH-OH group of donors9.74E-03
80GO:0004713: protein tyrosine kinase activity1.03E-02
81GO:0004805: trehalose-phosphatase activity1.03E-02
82GO:0003723: RNA binding1.08E-02
83GO:0008017: microtubule binding1.08E-02
84GO:0004521: endoribonuclease activity1.26E-02
85GO:0004565: beta-galactosidase activity1.38E-02
86GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.38E-02
87GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.50E-02
88GO:0051537: 2 iron, 2 sulfur cluster binding1.50E-02
89GO:0043621: protein self-association1.50E-02
90GO:0004674: protein serine/threonine kinase activity1.61E-02
91GO:0016788: hydrolase activity, acting on ester bonds1.82E-02
92GO:0003714: transcription corepressor activity1.89E-02
93GO:0005528: FK506 binding1.89E-02
94GO:0015079: potassium ion transmembrane transporter activity2.03E-02
95GO:0003727: single-stranded RNA binding2.61E-02
96GO:0052689: carboxylic ester hydrolase activity2.64E-02
97GO:0008536: Ran GTPase binding3.08E-02
98GO:0050662: coenzyme binding3.25E-02
99GO:0010181: FMN binding3.25E-02
100GO:0004252: serine-type endopeptidase activity3.69E-02
101GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.69E-02
102GO:0030170: pyridoxal phosphate binding3.69E-02
103GO:0051015: actin filament binding3.93E-02
104GO:0008565: protein transporter activity3.98E-02
105GO:0004519: endonuclease activity4.19E-02
106GO:0016722: oxidoreductase activity, oxidizing metal ions4.29E-02
107GO:0015297: antiporter activity4.37E-02
108GO:0015250: water channel activity4.65E-02
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Gene type



Gene DE type