GO Enrichment Analysis of Co-expressed Genes with
AT2G24120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0060966: regulation of gene silencing by RNA | 0.00E+00 |
| 2 | GO:0070829: heterochromatin maintenance | 0.00E+00 |
| 3 | GO:0071360: cellular response to exogenous dsRNA | 0.00E+00 |
| 4 | GO:1900370: positive regulation of RNA interference | 0.00E+00 |
| 5 | GO:0035563: positive regulation of chromatin binding | 0.00E+00 |
| 6 | GO:0006264: mitochondrial DNA replication | 3.37E-05 |
| 7 | GO:0033259: plastid DNA replication | 3.37E-05 |
| 8 | GO:0006430: lysyl-tRNA aminoacylation | 3.37E-05 |
| 9 | GO:1900368: regulation of RNA interference | 3.37E-05 |
| 10 | GO:1900111: positive regulation of histone H3-K9 dimethylation | 8.48E-05 |
| 11 | GO:0032776: DNA methylation on cytosine | 1.47E-04 |
| 12 | GO:0060968: regulation of gene silencing | 1.47E-04 |
| 13 | GO:0060964: regulation of gene silencing by miRNA | 2.18E-04 |
| 14 | GO:0009102: biotin biosynthetic process | 2.18E-04 |
| 15 | GO:0045727: positive regulation of translation | 2.95E-04 |
| 16 | GO:0009658: chloroplast organization | 3.03E-04 |
| 17 | GO:0016558: protein import into peroxisome matrix | 3.77E-04 |
| 18 | GO:0009913: epidermal cell differentiation | 4.63E-04 |
| 19 | GO:0010019: chloroplast-nucleus signaling pathway | 5.53E-04 |
| 20 | GO:0048444: floral organ morphogenesis | 5.53E-04 |
| 21 | GO:0010098: suspensor development | 6.47E-04 |
| 22 | GO:1900056: negative regulation of leaf senescence | 6.47E-04 |
| 23 | GO:0009664: plant-type cell wall organization | 7.35E-04 |
| 24 | GO:0005978: glycogen biosynthetic process | 7.44E-04 |
| 25 | GO:0042255: ribosome assembly | 7.44E-04 |
| 26 | GO:0010100: negative regulation of photomorphogenesis | 8.45E-04 |
| 27 | GO:0007186: G-protein coupled receptor signaling pathway | 8.45E-04 |
| 28 | GO:0001510: RNA methylation | 8.45E-04 |
| 29 | GO:0031425: chloroplast RNA processing | 1.06E-03 |
| 30 | GO:0030422: production of siRNA involved in RNA interference | 1.17E-03 |
| 31 | GO:0006949: syncytium formation | 1.17E-03 |
| 32 | GO:0006259: DNA metabolic process | 1.17E-03 |
| 33 | GO:0006265: DNA topological change | 1.28E-03 |
| 34 | GO:0009934: regulation of meristem structural organization | 1.65E-03 |
| 35 | GO:0006302: double-strand break repair | 1.65E-03 |
| 36 | GO:0080188: RNA-directed DNA methylation | 1.78E-03 |
| 37 | GO:0009451: RNA modification | 1.90E-03 |
| 38 | GO:0051302: regulation of cell division | 2.19E-03 |
| 39 | GO:0006418: tRNA aminoacylation for protein translation | 2.19E-03 |
| 40 | GO:0043622: cortical microtubule organization | 2.19E-03 |
| 41 | GO:0007017: microtubule-based process | 2.19E-03 |
| 42 | GO:0006306: DNA methylation | 2.33E-03 |
| 43 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.63E-03 |
| 44 | GO:0010501: RNA secondary structure unwinding | 3.09E-03 |
| 45 | GO:0007059: chromosome segregation | 3.42E-03 |
| 46 | GO:0009749: response to glucose | 3.59E-03 |
| 47 | GO:0019252: starch biosynthetic process | 3.59E-03 |
| 48 | GO:0009791: post-embryonic development | 3.59E-03 |
| 49 | GO:0006635: fatty acid beta-oxidation | 3.76E-03 |
| 50 | GO:0080156: mitochondrial mRNA modification | 3.76E-03 |
| 51 | GO:0032502: developmental process | 3.93E-03 |
| 52 | GO:0006464: cellular protein modification process | 4.28E-03 |
| 53 | GO:0009828: plant-type cell wall loosening | 4.28E-03 |
| 54 | GO:0006281: DNA repair | 5.18E-03 |
| 55 | GO:0009627: systemic acquired resistance | 5.21E-03 |
| 56 | GO:0048481: plant ovule development | 5.79E-03 |
| 57 | GO:0007165: signal transduction | 8.15E-03 |
| 58 | GO:0009737: response to abscisic acid | 8.39E-03 |
| 59 | GO:0006260: DNA replication | 9.30E-03 |
| 60 | GO:0009793: embryo development ending in seed dormancy | 9.31E-03 |
| 61 | GO:0006364: rRNA processing | 1.00E-02 |
| 62 | GO:0009585: red, far-red light phototransduction | 1.00E-02 |
| 63 | GO:0006470: protein dephosphorylation | 2.08E-02 |
| 64 | GO:0008380: RNA splicing | 2.15E-02 |
| 65 | GO:0009826: unidimensional cell growth | 2.51E-02 |
| 66 | GO:0006970: response to osmotic stress | 2.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004835: tubulin-tyrosine ligase activity | 0.00E+00 |
| 2 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 3 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 4 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 5 | GO:0034335: DNA supercoiling activity | 3.37E-05 |
| 6 | GO:0004824: lysine-tRNA ligase activity | 3.37E-05 |
| 7 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 8.48E-05 |
| 8 | GO:0043169: cation binding | 1.47E-04 |
| 9 | GO:0003916: DNA topoisomerase activity | 2.18E-04 |
| 10 | GO:0008409: 5'-3' exonuclease activity | 2.95E-04 |
| 11 | GO:0004556: alpha-amylase activity | 4.63E-04 |
| 12 | GO:0004519: endonuclease activity | 7.26E-04 |
| 13 | GO:0003723: RNA binding | 7.65E-04 |
| 14 | GO:0008173: RNA methyltransferase activity | 8.45E-04 |
| 15 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 8.45E-04 |
| 16 | GO:0008026: ATP-dependent helicase activity | 1.16E-03 |
| 17 | GO:0009982: pseudouridine synthase activity | 1.52E-03 |
| 18 | GO:0003887: DNA-directed DNA polymerase activity | 1.91E-03 |
| 19 | GO:0008408: 3'-5' exonuclease activity | 2.33E-03 |
| 20 | GO:0003727: single-stranded RNA binding | 2.78E-03 |
| 21 | GO:0004812: aminoacyl-tRNA ligase activity | 2.94E-03 |
| 22 | GO:0016791: phosphatase activity | 4.28E-03 |
| 23 | GO:0004004: ATP-dependent RNA helicase activity | 5.40E-03 |
| 24 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 5.60E-03 |
| 25 | GO:0005096: GTPase activator activity | 5.99E-03 |
| 26 | GO:0005524: ATP binding | 1.22E-02 |
| 27 | GO:0016874: ligase activity | 1.23E-02 |
| 28 | GO:0004386: helicase activity | 1.37E-02 |
| 29 | GO:0019843: rRNA binding | 1.51E-02 |
| 30 | GO:0046872: metal ion binding | 1.57E-02 |
| 31 | GO:0030170: pyridoxal phosphate binding | 1.62E-02 |
| 32 | GO:0003677: DNA binding | 1.75E-02 |
| 33 | GO:0000287: magnesium ion binding | 2.55E-02 |
| 34 | GO:0003729: mRNA binding | 2.78E-02 |
| 35 | GO:0004871: signal transducer activity | 3.54E-02 |
| 36 | GO:0004722: protein serine/threonine phosphatase activity | 3.66E-02 |
| 37 | GO:0003735: structural constituent of ribosome | 3.71E-02 |