GO Enrichment Analysis of Co-expressed Genes with
AT2G23360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 2 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 3 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 4 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 5 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 6 | GO:0010588: cotyledon vascular tissue pattern formation | 1.60E-05 |
| 7 | GO:0010067: procambium histogenesis | 7.89E-05 |
| 8 | GO:0048016: inositol phosphate-mediated signaling | 1.75E-04 |
| 9 | GO:0048829: root cap development | 2.90E-04 |
| 10 | GO:1900033: negative regulation of trichome patterning | 3.96E-04 |
| 11 | GO:0080009: mRNA methylation | 3.96E-04 |
| 12 | GO:0051214: RNA virus induced gene silencing | 3.96E-04 |
| 13 | GO:2000123: positive regulation of stomatal complex development | 3.96E-04 |
| 14 | GO:0048731: system development | 3.96E-04 |
| 15 | GO:0006518: peptide metabolic process | 6.47E-04 |
| 16 | GO:0003333: amino acid transmembrane transport | 8.23E-04 |
| 17 | GO:1902290: positive regulation of defense response to oomycetes | 9.23E-04 |
| 18 | GO:0009102: biotin biosynthetic process | 9.23E-04 |
| 19 | GO:0007276: gamete generation | 9.23E-04 |
| 20 | GO:0042127: regulation of cell proliferation | 1.06E-03 |
| 21 | GO:0009416: response to light stimulus | 1.21E-03 |
| 22 | GO:0006479: protein methylation | 1.22E-03 |
| 23 | GO:0048629: trichome patterning | 1.22E-03 |
| 24 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.22E-03 |
| 25 | GO:2000038: regulation of stomatal complex development | 1.22E-03 |
| 26 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.27E-03 |
| 27 | GO:0010305: leaf vascular tissue pattern formation | 1.32E-03 |
| 28 | GO:0032957: inositol trisphosphate metabolic process | 1.56E-03 |
| 29 | GO:0010375: stomatal complex patterning | 1.56E-03 |
| 30 | GO:0080110: sporopollenin biosynthetic process | 1.56E-03 |
| 31 | GO:0009643: photosynthetic acclimation | 1.91E-03 |
| 32 | GO:0009959: negative gravitropism | 1.91E-03 |
| 33 | GO:0016554: cytidine to uridine editing | 1.91E-03 |
| 34 | GO:0046855: inositol phosphate dephosphorylation | 1.91E-03 |
| 35 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.30E-03 |
| 36 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.30E-03 |
| 37 | GO:0010103: stomatal complex morphogenesis | 2.70E-03 |
| 38 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 2.70E-03 |
| 39 | GO:0010374: stomatal complex development | 2.70E-03 |
| 40 | GO:0010492: maintenance of shoot apical meristem identity | 3.13E-03 |
| 41 | GO:0042255: ribosome assembly | 3.13E-03 |
| 42 | GO:0006353: DNA-templated transcription, termination | 3.13E-03 |
| 43 | GO:0007186: G-protein coupled receptor signaling pathway | 3.58E-03 |
| 44 | GO:0001510: RNA methylation | 3.58E-03 |
| 45 | GO:0048574: long-day photoperiodism, flowering | 3.58E-03 |
| 46 | GO:0010052: guard cell differentiation | 3.58E-03 |
| 47 | GO:0009734: auxin-activated signaling pathway | 3.68E-03 |
| 48 | GO:0006865: amino acid transport | 3.68E-03 |
| 49 | GO:0000373: Group II intron splicing | 4.05E-03 |
| 50 | GO:0048589: developmental growth | 4.05E-03 |
| 51 | GO:0030001: metal ion transport | 4.38E-03 |
| 52 | GO:1900426: positive regulation of defense response to bacterium | 4.54E-03 |
| 53 | GO:1900865: chloroplast RNA modification | 4.54E-03 |
| 54 | GO:0010267: production of ta-siRNAs involved in RNA interference | 4.54E-03 |
| 55 | GO:0006349: regulation of gene expression by genetic imprinting | 4.54E-03 |
| 56 | GO:0030422: production of siRNA involved in RNA interference | 5.05E-03 |
| 57 | GO:0010048: vernalization response | 5.05E-03 |
| 58 | GO:0006535: cysteine biosynthetic process from serine | 5.05E-03 |
| 59 | GO:0009733: response to auxin | 5.13E-03 |
| 60 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.58E-03 |
| 61 | GO:0009750: response to fructose | 5.58E-03 |
| 62 | GO:0010216: maintenance of DNA methylation | 5.58E-03 |
| 63 | GO:0046856: phosphatidylinositol dephosphorylation | 5.58E-03 |
| 64 | GO:0008285: negative regulation of cell proliferation | 5.58E-03 |
| 65 | GO:0031347: regulation of defense response | 5.99E-03 |
| 66 | GO:0012501: programmed cell death | 6.13E-03 |
| 67 | GO:0010152: pollen maturation | 6.13E-03 |
| 68 | GO:0010102: lateral root morphogenesis | 6.70E-03 |
| 69 | GO:0010223: secondary shoot formation | 7.28E-03 |
| 70 | GO:0009887: animal organ morphogenesis | 7.28E-03 |
| 71 | GO:0048367: shoot system development | 8.14E-03 |
| 72 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.51E-03 |
| 73 | GO:0019344: cysteine biosynthetic process | 9.15E-03 |
| 74 | GO:0080147: root hair cell development | 9.15E-03 |
| 75 | GO:0006825: copper ion transport | 9.80E-03 |
| 76 | GO:0006874: cellular calcium ion homeostasis | 9.80E-03 |
| 77 | GO:0006351: transcription, DNA-templated | 9.95E-03 |
| 78 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.12E-02 |
| 79 | GO:0001944: vasculature development | 1.19E-02 |
| 80 | GO:0010089: xylem development | 1.26E-02 |
| 81 | GO:0010584: pollen exine formation | 1.26E-02 |
| 82 | GO:0048443: stamen development | 1.26E-02 |
| 83 | GO:0006284: base-excision repair | 1.26E-02 |
| 84 | GO:0080022: primary root development | 1.41E-02 |
| 85 | GO:0008033: tRNA processing | 1.41E-02 |
| 86 | GO:0010051: xylem and phloem pattern formation | 1.41E-02 |
| 87 | GO:0010087: phloem or xylem histogenesis | 1.41E-02 |
| 88 | GO:0009960: endosperm development | 1.49E-02 |
| 89 | GO:0040008: regulation of growth | 1.57E-02 |
| 90 | GO:0009749: response to glucose | 1.64E-02 |
| 91 | GO:0045490: pectin catabolic process | 1.65E-02 |
| 92 | GO:0009793: embryo development ending in seed dormancy | 1.79E-02 |
| 93 | GO:0031047: gene silencing by RNA | 1.81E-02 |
| 94 | GO:0030163: protein catabolic process | 1.89E-02 |
| 95 | GO:0009908: flower development | 1.90E-02 |
| 96 | GO:0019760: glucosinolate metabolic process | 1.98E-02 |
| 97 | GO:0009639: response to red or far red light | 1.98E-02 |
| 98 | GO:0007267: cell-cell signaling | 2.06E-02 |
| 99 | GO:0006355: regulation of transcription, DNA-templated | 2.09E-02 |
| 100 | GO:0051607: defense response to virus | 2.15E-02 |
| 101 | GO:0006468: protein phosphorylation | 2.39E-02 |
| 102 | GO:0009658: chloroplast organization | 2.55E-02 |
| 103 | GO:0048481: plant ovule development | 2.71E-02 |
| 104 | GO:0009834: plant-type secondary cell wall biogenesis | 2.90E-02 |
| 105 | GO:0006811: ion transport | 2.90E-02 |
| 106 | GO:0048366: leaf development | 3.00E-02 |
| 107 | GO:0080167: response to karrikin | 3.16E-02 |
| 108 | GO:0009744: response to sucrose | 3.84E-02 |
| 109 | GO:0051707: response to other organism | 3.84E-02 |
| 110 | GO:0045892: negative regulation of transcription, DNA-templated | 3.84E-02 |
| 111 | GO:0006260: DNA replication | 4.39E-02 |
| 112 | GO:0048364: root development | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 2 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 3 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
| 4 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 5 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 6 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 7 | GO:0046030: inositol trisphosphate phosphatase activity | 1.75E-04 |
| 8 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.75E-04 |
| 9 | GO:0016274: protein-arginine N-methyltransferase activity | 1.75E-04 |
| 10 | GO:0042389: omega-3 fatty acid desaturase activity | 3.96E-04 |
| 11 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 3.96E-04 |
| 12 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 3.96E-04 |
| 13 | GO:0003725: double-stranded RNA binding | 4.39E-04 |
| 14 | GO:0009041: uridylate kinase activity | 9.23E-04 |
| 15 | GO:0030570: pectate lyase activity | 9.77E-04 |
| 16 | GO:0003727: single-stranded RNA binding | 1.06E-03 |
| 17 | GO:0004674: protein serine/threonine kinase activity | 1.16E-03 |
| 18 | GO:0010011: auxin binding | 1.22E-03 |
| 19 | GO:0010328: auxin influx transmembrane transporter activity | 1.22E-03 |
| 20 | GO:0004930: G-protein coupled receptor activity | 1.22E-03 |
| 21 | GO:0019901: protein kinase binding | 1.52E-03 |
| 22 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.56E-03 |
| 23 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.91E-03 |
| 24 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.17E-03 |
| 25 | GO:0004124: cysteine synthase activity | 2.30E-03 |
| 26 | GO:0016832: aldehyde-lyase activity | 2.30E-03 |
| 27 | GO:0004525: ribonuclease III activity | 3.13E-03 |
| 28 | GO:0004222: metalloendopeptidase activity | 3.35E-03 |
| 29 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.58E-03 |
| 30 | GO:0003723: RNA binding | 3.78E-03 |
| 31 | GO:0008168: methyltransferase activity | 4.60E-03 |
| 32 | GO:0004713: protein tyrosine kinase activity | 5.05E-03 |
| 33 | GO:0015293: symporter activity | 5.56E-03 |
| 34 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.13E-03 |
| 35 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.28E-03 |
| 36 | GO:0015171: amino acid transmembrane transporter activity | 7.38E-03 |
| 37 | GO:0004970: ionotropic glutamate receptor activity | 7.89E-03 |
| 38 | GO:0004190: aspartic-type endopeptidase activity | 7.89E-03 |
| 39 | GO:0005217: intracellular ligand-gated ion channel activity | 7.89E-03 |
| 40 | GO:0004672: protein kinase activity | 8.20E-03 |
| 41 | GO:0004871: signal transducer activity | 8.46E-03 |
| 42 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 9.12E-03 |
| 43 | GO:0003714: transcription corepressor activity | 9.15E-03 |
| 44 | GO:0003779: actin binding | 9.21E-03 |
| 45 | GO:0016829: lyase activity | 1.29E-02 |
| 46 | GO:0030170: pyridoxal phosphate binding | 1.32E-02 |
| 47 | GO:0005102: receptor binding | 1.33E-02 |
| 48 | GO:0018024: histone-lysine N-methyltransferase activity | 1.33E-02 |
| 49 | GO:0001085: RNA polymerase II transcription factor binding | 1.49E-02 |
| 50 | GO:0050662: coenzyme binding | 1.56E-02 |
| 51 | GO:0005200: structural constituent of cytoskeleton | 2.06E-02 |
| 52 | GO:0005096: GTPase activator activity | 2.80E-02 |
| 53 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.90E-02 |
| 54 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.00E-02 |
| 55 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.00E-02 |
| 56 | GO:0003697: single-stranded DNA binding | 3.20E-02 |
| 57 | GO:0005524: ATP binding | 3.65E-02 |
| 58 | GO:0042803: protein homodimerization activity | 3.96E-02 |
| 59 | GO:0003690: double-stranded DNA binding | 4.86E-02 |