GO Enrichment Analysis of Co-expressed Genes with
AT2G23290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 2 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 3 | GO:0042793: transcription from plastid promoter | 1.46E-07 |
| 4 | GO:0042255: ribosome assembly | 6.58E-05 |
| 5 | GO:0046620: regulation of organ growth | 6.58E-05 |
| 6 | GO:0006353: DNA-templated transcription, termination | 6.58E-05 |
| 7 | GO:1905039: carboxylic acid transmembrane transport | 1.10E-04 |
| 8 | GO:1905200: gibberellic acid transmembrane transport | 1.10E-04 |
| 9 | GO:0034757: negative regulation of iron ion transport | 1.10E-04 |
| 10 | GO:0080112: seed growth | 1.10E-04 |
| 11 | GO:1903866: palisade mesophyll development | 1.10E-04 |
| 12 | GO:1900865: chloroplast RNA modification | 1.24E-04 |
| 13 | GO:0010271: regulation of chlorophyll catabolic process | 2.57E-04 |
| 14 | GO:0009662: etioplast organization | 2.57E-04 |
| 15 | GO:0080009: mRNA methylation | 2.57E-04 |
| 16 | GO:0010569: regulation of double-strand break repair via homologous recombination | 2.57E-04 |
| 17 | GO:0009658: chloroplast organization | 3.25E-04 |
| 18 | GO:0080117: secondary growth | 4.25E-04 |
| 19 | GO:0090391: granum assembly | 4.25E-04 |
| 20 | GO:0006518: peptide metabolic process | 4.25E-04 |
| 21 | GO:0010371: regulation of gibberellin biosynthetic process | 6.10E-04 |
| 22 | GO:0010239: chloroplast mRNA processing | 6.10E-04 |
| 23 | GO:0016556: mRNA modification | 6.10E-04 |
| 24 | GO:0006021: inositol biosynthetic process | 8.10E-04 |
| 25 | GO:0006346: methylation-dependent chromatin silencing | 8.10E-04 |
| 26 | GO:0006479: protein methylation | 8.10E-04 |
| 27 | GO:1900864: mitochondrial RNA modification | 8.10E-04 |
| 28 | GO:0006221: pyrimidine nucleotide biosynthetic process | 8.10E-04 |
| 29 | GO:0048497: maintenance of floral organ identity | 1.02E-03 |
| 30 | GO:0009913: epidermal cell differentiation | 1.25E-03 |
| 31 | GO:1902456: regulation of stomatal opening | 1.25E-03 |
| 32 | GO:0048831: regulation of shoot system development | 1.25E-03 |
| 33 | GO:0009643: photosynthetic acclimation | 1.25E-03 |
| 34 | GO:0006014: D-ribose metabolic process | 1.25E-03 |
| 35 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.25E-03 |
| 36 | GO:0016554: cytidine to uridine editing | 1.25E-03 |
| 37 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.49E-03 |
| 38 | GO:0048509: regulation of meristem development | 1.49E-03 |
| 39 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.49E-03 |
| 40 | GO:0009955: adaxial/abaxial pattern specification | 1.49E-03 |
| 41 | GO:0008380: RNA splicing | 1.53E-03 |
| 42 | GO:0000105: histidine biosynthetic process | 2.03E-03 |
| 43 | GO:0052543: callose deposition in cell wall | 2.03E-03 |
| 44 | GO:0009642: response to light intensity | 2.03E-03 |
| 45 | GO:0019430: removal of superoxide radicals | 2.32E-03 |
| 46 | GO:0006535: cysteine biosynthetic process from serine | 3.25E-03 |
| 47 | GO:0006949: syncytium formation | 3.25E-03 |
| 48 | GO:0006364: rRNA processing | 3.51E-03 |
| 49 | GO:0009750: response to fructose | 3.59E-03 |
| 50 | GO:0015770: sucrose transport | 3.59E-03 |
| 51 | GO:0006790: sulfur compound metabolic process | 3.93E-03 |
| 52 | GO:0046854: phosphatidylinositol phosphorylation | 5.04E-03 |
| 53 | GO:0080188: RNA-directed DNA methylation | 5.04E-03 |
| 54 | GO:0009901: anther dehiscence | 5.04E-03 |
| 55 | GO:0019344: cysteine biosynthetic process | 5.84E-03 |
| 56 | GO:0019953: sexual reproduction | 6.25E-03 |
| 57 | GO:0010431: seed maturation | 6.67E-03 |
| 58 | GO:0006306: DNA methylation | 6.67E-03 |
| 59 | GO:0009733: response to auxin | 6.78E-03 |
| 60 | GO:0009734: auxin-activated signaling pathway | 7.06E-03 |
| 61 | GO:0071215: cellular response to abscisic acid stimulus | 7.55E-03 |
| 62 | GO:0040008: regulation of growth | 8.20E-03 |
| 63 | GO:0070417: cellular response to cold | 8.46E-03 |
| 64 | GO:0045490: pectin catabolic process | 8.60E-03 |
| 65 | GO:0009451: RNA modification | 8.79E-03 |
| 66 | GO:0008033: tRNA processing | 8.93E-03 |
| 67 | GO:0010087: phloem or xylem histogenesis | 8.93E-03 |
| 68 | GO:0010118: stomatal movement | 8.93E-03 |
| 69 | GO:0048544: recognition of pollen | 9.91E-03 |
| 70 | GO:0007018: microtubule-based movement | 9.91E-03 |
| 71 | GO:0048825: cotyledon development | 1.04E-02 |
| 72 | GO:0009749: response to glucose | 1.04E-02 |
| 73 | GO:0019252: starch biosynthetic process | 1.04E-02 |
| 74 | GO:0009851: auxin biosynthetic process | 1.04E-02 |
| 75 | GO:0080156: mitochondrial mRNA modification | 1.09E-02 |
| 76 | GO:0010583: response to cyclopentenone | 1.14E-02 |
| 77 | GO:0031047: gene silencing by RNA | 1.14E-02 |
| 78 | GO:0019761: glucosinolate biosynthetic process | 1.14E-02 |
| 79 | GO:0032502: developmental process | 1.14E-02 |
| 80 | GO:0009828: plant-type cell wall loosening | 1.25E-02 |
| 81 | GO:0010027: thylakoid membrane organization | 1.42E-02 |
| 82 | GO:0010029: regulation of seed germination | 1.47E-02 |
| 83 | GO:0000160: phosphorelay signal transduction system | 1.77E-02 |
| 84 | GO:0009793: embryo development ending in seed dormancy | 2.01E-02 |
| 85 | GO:0030001: metal ion transport | 2.22E-02 |
| 86 | GO:0016042: lipid catabolic process | 2.38E-02 |
| 87 | GO:0008283: cell proliferation | 2.42E-02 |
| 88 | GO:0009926: auxin polar transport | 2.42E-02 |
| 89 | GO:0009744: response to sucrose | 2.42E-02 |
| 90 | GO:0006397: mRNA processing | 2.55E-02 |
| 91 | GO:0009636: response to toxic substance | 2.63E-02 |
| 92 | GO:0009664: plant-type cell wall organization | 2.85E-02 |
| 93 | GO:0009736: cytokinin-activated signaling pathway | 2.99E-02 |
| 94 | GO:0009909: regulation of flower development | 3.22E-02 |
| 95 | GO:0048367: shoot system development | 3.45E-02 |
| 96 | GO:0009740: gibberellic acid mediated signaling pathway | 3.69E-02 |
| 97 | GO:0016569: covalent chromatin modification | 3.69E-02 |
| 98 | GO:0005975: carbohydrate metabolic process | 3.88E-02 |
| 99 | GO:0006396: RNA processing | 3.93E-02 |
| 100 | GO:0009845: seed germination | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 2 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 3 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 4 | GO:0016274: protein-arginine N-methyltransferase activity | 1.10E-04 |
| 5 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.10E-04 |
| 6 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.10E-04 |
| 7 | GO:0004016: adenylate cyclase activity | 1.10E-04 |
| 8 | GO:1905201: gibberellin transmembrane transporter activity | 1.10E-04 |
| 9 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.10E-04 |
| 10 | GO:0004519: endonuclease activity | 1.50E-04 |
| 11 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 2.57E-04 |
| 12 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.57E-04 |
| 13 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.57E-04 |
| 14 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.57E-04 |
| 15 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 2.57E-04 |
| 16 | GO:0009884: cytokinin receptor activity | 2.57E-04 |
| 17 | GO:0005034: osmosensor activity | 4.25E-04 |
| 18 | GO:0017150: tRNA dihydrouridine synthase activity | 4.25E-04 |
| 19 | GO:0030570: pectate lyase activity | 5.28E-04 |
| 20 | GO:0003727: single-stranded RNA binding | 5.72E-04 |
| 21 | GO:0009041: uridylate kinase activity | 6.10E-04 |
| 22 | GO:0003723: RNA binding | 6.85E-04 |
| 23 | GO:0019843: rRNA binding | 8.28E-04 |
| 24 | GO:0004784: superoxide dismutase activity | 1.25E-03 |
| 25 | GO:0019900: kinase binding | 1.49E-03 |
| 26 | GO:0004124: cysteine synthase activity | 1.49E-03 |
| 27 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.49E-03 |
| 28 | GO:0004747: ribokinase activity | 1.49E-03 |
| 29 | GO:0004222: metalloendopeptidase activity | 1.78E-03 |
| 30 | GO:0008865: fructokinase activity | 2.03E-03 |
| 31 | GO:0008173: RNA methyltransferase activity | 2.32E-03 |
| 32 | GO:0046872: metal ion binding | 2.82E-03 |
| 33 | GO:0004673: protein histidine kinase activity | 3.25E-03 |
| 34 | GO:0008515: sucrose transmembrane transporter activity | 3.59E-03 |
| 35 | GO:0003690: double-stranded DNA binding | 3.63E-03 |
| 36 | GO:0000155: phosphorelay sensor kinase activity | 4.30E-03 |
| 37 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.66E-03 |
| 38 | GO:0051119: sugar transmembrane transporter activity | 5.04E-03 |
| 39 | GO:0043424: protein histidine kinase binding | 6.25E-03 |
| 40 | GO:0004176: ATP-dependent peptidase activity | 6.67E-03 |
| 41 | GO:0003713: transcription coactivator activity | 9.41E-03 |
| 42 | GO:0048038: quinone binding | 1.09E-02 |
| 43 | GO:0008237: metallopeptidase activity | 1.30E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 1.36E-02 |
| 45 | GO:0051213: dioxygenase activity | 1.42E-02 |
| 46 | GO:0052689: carboxylic ester hydrolase activity | 1.83E-02 |
| 47 | GO:0003697: single-stranded DNA binding | 2.02E-02 |
| 48 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.02E-02 |
| 49 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.22E-02 |
| 50 | GO:0003777: microtubule motor activity | 3.22E-02 |
| 51 | GO:0004650: polygalacturonase activity | 3.61E-02 |
| 52 | GO:0016887: ATPase activity | 3.78E-02 |
| 53 | GO:0008026: ATP-dependent helicase activity | 4.01E-02 |
| 54 | GO:0004386: helicase activity | 4.09E-02 |
| 55 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.60E-02 |
| 56 | GO:0016829: lyase activity | 4.77E-02 |
| 57 | GO:0030170: pyridoxal phosphate binding | 4.86E-02 |
| 58 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.95E-02 |