Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G23000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006982: response to lipid hydroperoxide0.00E+00
2GO:0010335: response to non-ionic osmotic stress0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:0006573: valine metabolic process0.00E+00
6GO:0046471: phosphatidylglycerol metabolic process0.00E+00
7GO:0016559: peroxisome fission1.62E-04
8GO:0010362: negative regulation of anion channel activity by blue light1.98E-04
9GO:0015969: guanosine tetraphosphate metabolic process1.98E-04
10GO:0046467: membrane lipid biosynthetic process1.98E-04
11GO:0031426: polycistronic mRNA processing1.98E-04
12GO:0000481: maturation of 5S rRNA1.98E-04
13GO:0006551: leucine metabolic process1.98E-04
14GO:0043686: co-translational protein modification1.98E-04
15GO:0043087: regulation of GTPase activity1.98E-04
16GO:0071461: cellular response to redox state1.98E-04
17GO:0046167: glycerol-3-phosphate biosynthetic process1.98E-04
18GO:0048438: floral whorl development1.98E-04
19GO:1902458: positive regulation of stomatal opening1.98E-04
20GO:0034337: RNA folding1.98E-04
21GO:0015995: chlorophyll biosynthetic process3.58E-04
22GO:0015790: UDP-xylose transport4.43E-04
23GO:0042819: vitamin B6 biosynthetic process4.43E-04
24GO:0006650: glycerophospholipid metabolic process4.43E-04
25GO:0080005: photosystem stoichiometry adjustment4.43E-04
26GO:0010541: acropetal auxin transport4.43E-04
27GO:0010220: positive regulation of vernalization response4.43E-04
28GO:0010155: regulation of proton transport4.43E-04
29GO:1903426: regulation of reactive oxygen species biosynthetic process4.43E-04
30GO:0010143: cutin biosynthetic process5.82E-04
31GO:0046168: glycerol-3-phosphate catabolic process7.22E-04
32GO:0010160: formation of animal organ boundary7.22E-04
33GO:0044375: regulation of peroxisome size7.22E-04
34GO:0010239: chloroplast mRNA processing1.03E-03
35GO:0043481: anthocyanin accumulation in tissues in response to UV light1.03E-03
36GO:0006072: glycerol-3-phosphate metabolic process1.03E-03
37GO:0042823: pyridoxal phosphate biosynthetic process1.03E-03
38GO:0008615: pyridoxine biosynthetic process1.03E-03
39GO:2001141: regulation of RNA biosynthetic process1.03E-03
40GO:0019722: calcium-mediated signaling1.24E-03
41GO:0015994: chlorophyll metabolic process1.37E-03
42GO:0008295: spermidine biosynthetic process1.37E-03
43GO:0006021: inositol biosynthetic process1.37E-03
44GO:0006520: cellular amino acid metabolic process1.56E-03
45GO:0006465: signal peptide processing1.74E-03
46GO:0009904: chloroplast accumulation movement1.74E-03
47GO:0045038: protein import into chloroplast thylakoid membrane1.74E-03
48GO:0031365: N-terminal protein amino acid modification1.74E-03
49GO:0044550: secondary metabolite biosynthetic process1.77E-03
50GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.14E-03
51GO:0060918: auxin transport2.14E-03
52GO:0000060: protein import into nucleus, translocation2.14E-03
53GO:0046855: inositol phosphate dephosphorylation2.14E-03
54GO:0055114: oxidation-reduction process2.25E-03
55GO:0007267: cell-cell signaling2.46E-03
56GO:0010077: maintenance of inflorescence meristem identity2.57E-03
57GO:0010076: maintenance of floral meristem identity2.57E-03
58GO:0009082: branched-chain amino acid biosynthetic process2.57E-03
59GO:0009099: valine biosynthetic process2.57E-03
60GO:0009903: chloroplast avoidance movement2.57E-03
61GO:0009854: oxidative photosynthetic carbon pathway2.57E-03
62GO:0010019: chloroplast-nucleus signaling pathway2.57E-03
63GO:1900056: negative regulation of leaf senescence3.03E-03
64GO:0007155: cell adhesion3.51E-03
65GO:0032508: DNA duplex unwinding3.51E-03
66GO:2000070: regulation of response to water deprivation3.51E-03
67GO:0009231: riboflavin biosynthetic process3.51E-03
68GO:0006811: ion transport3.95E-03
69GO:0009932: cell tip growth4.02E-03
70GO:0071482: cellular response to light stimulus4.02E-03
71GO:0015996: chlorophyll catabolic process4.02E-03
72GO:0007186: G-protein coupled receptor signaling pathway4.02E-03
73GO:0009657: plastid organization4.02E-03
74GO:0009097: isoleucine biosynthetic process4.02E-03
75GO:0048507: meristem development4.54E-03
76GO:0009821: alkaloid biosynthetic process4.54E-03
77GO:0009637: response to blue light4.54E-03
78GO:0009638: phototropism5.10E-03
79GO:0048354: mucilage biosynthetic process involved in seed coat development5.10E-03
80GO:0010380: regulation of chlorophyll biosynthetic process5.10E-03
81GO:0010192: mucilage biosynthetic process5.67E-03
82GO:0043069: negative regulation of programmed cell death5.67E-03
83GO:0009641: shade avoidance5.67E-03
84GO:0009658: chloroplast organization5.98E-03
85GO:0042546: cell wall biogenesis6.09E-03
86GO:0000038: very long-chain fatty acid metabolic process6.27E-03
87GO:0043085: positive regulation of catalytic activity6.27E-03
88GO:0006352: DNA-templated transcription, initiation6.27E-03
89GO:0016485: protein processing6.27E-03
90GO:0008361: regulation of cell size6.89E-03
91GO:0006790: sulfur compound metabolic process6.89E-03
92GO:0016024: CDP-diacylglycerol biosynthetic process6.89E-03
93GO:0045037: protein import into chloroplast stroma6.89E-03
94GO:0010582: floral meristem determinacy6.89E-03
95GO:0042538: hyperosmotic salinity response7.34E-03
96GO:0009767: photosynthetic electron transport chain7.52E-03
97GO:0009785: blue light signaling pathway7.52E-03
98GO:0030048: actin filament-based movement7.52E-03
99GO:0009718: anthocyanin-containing compound biosynthetic process7.52E-03
100GO:0010020: chloroplast fission8.19E-03
101GO:0010207: photosystem II assembly8.19E-03
102GO:0010223: secondary shoot formation8.19E-03
103GO:0009887: animal organ morphogenesis8.19E-03
104GO:0010540: basipetal auxin transport8.19E-03
105GO:0045893: positive regulation of transcription, DNA-templated8.33E-03
106GO:0006857: oligopeptide transport8.44E-03
107GO:0007031: peroxisome organization8.87E-03
108GO:0042343: indole glucosinolate metabolic process8.87E-03
109GO:0019853: L-ascorbic acid biosynthetic process8.87E-03
110GO:0046854: phosphatidylinositol phosphorylation8.87E-03
111GO:0006636: unsaturated fatty acid biosynthetic process9.57E-03
112GO:0007017: microtubule-based process1.10E-02
113GO:0019915: lipid storage1.18E-02
114GO:0061077: chaperone-mediated protein folding1.18E-02
115GO:0098542: defense response to other organism1.18E-02
116GO:0032259: methylation1.22E-02
117GO:0030433: ubiquitin-dependent ERAD pathway1.26E-02
118GO:0009294: DNA mediated transformation1.34E-02
119GO:0071369: cellular response to ethylene stimulus1.34E-02
120GO:0048443: stamen development1.42E-02
121GO:0006817: phosphate ion transport1.42E-02
122GO:0045489: pectin biosynthetic process1.67E-02
123GO:0009958: positive gravitropism1.67E-02
124GO:0010182: sugar mediated signaling pathway1.67E-02
125GO:0009646: response to absence of light1.76E-02
126GO:0009791: post-embryonic development1.85E-02
127GO:0010183: pollen tube guidance1.85E-02
128GO:0008654: phospholipid biosynthetic process1.85E-02
129GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.94E-02
130GO:0071554: cell wall organization or biogenesis1.94E-02
131GO:0007623: circadian rhythm1.95E-02
132GO:0071555: cell wall organization1.96E-02
133GO:0007264: small GTPase mediated signal transduction2.04E-02
134GO:0009639: response to red or far red light2.23E-02
135GO:0010027: thylakoid membrane organization2.53E-02
136GO:0010411: xyloglucan metabolic process2.84E-02
137GO:0016311: dephosphorylation2.94E-02
138GO:0030244: cellulose biosynthetic process3.05E-02
139GO:0018298: protein-chromophore linkage3.05E-02
140GO:0000160: phosphorelay signal transduction system3.16E-02
141GO:0009407: toxin catabolic process3.27E-02
142GO:0010218: response to far red light3.27E-02
143GO:0009910: negative regulation of flower development3.38E-02
144GO:0048527: lateral root development3.38E-02
145GO:0010119: regulation of stomatal movement3.38E-02
146GO:0007568: aging3.38E-02
147GO:0009853: photorespiration3.61E-02
148GO:0034599: cellular response to oxidative stress3.73E-02
149GO:0080167: response to karrikin3.74E-02
150GO:0009640: photomorphogenesis4.32E-02
151GO:0010114: response to red light4.32E-02
152GO:0009926: auxin polar transport4.32E-02
153GO:0000209: protein polyubiquitination4.45E-02
154GO:0008643: carbohydrate transport4.57E-02
155GO:0009636: response to toxic substance4.70E-02
156GO:0000165: MAPK cascade4.95E-02
RankGO TermAdjusted P value
1GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
2GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
3GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
4GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
5GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
6GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
7GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
8GO:0036033: mediator complex binding0.00E+00
9GO:0000293: ferric-chelate reductase activity6.86E-05
10GO:0035671: enone reductase activity1.98E-04
11GO:0046906: tetrapyrrole binding1.98E-04
12GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.98E-04
13GO:0030794: (S)-coclaurine-N-methyltransferase activity1.98E-04
14GO:0016491: oxidoreductase activity1.98E-04
15GO:0080132: fatty acid alpha-hydroxylase activity1.98E-04
16GO:0042586: peptide deformylase activity1.98E-04
17GO:0016618: hydroxypyruvate reductase activity1.98E-04
18GO:0003984: acetolactate synthase activity1.98E-04
19GO:0004328: formamidase activity1.98E-04
20GO:0010347: L-galactose-1-phosphate phosphatase activity1.98E-04
21GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity4.43E-04
22GO:0004766: spermidine synthase activity4.43E-04
23GO:0052832: inositol monophosphate 3-phosphatase activity4.43E-04
24GO:0008934: inositol monophosphate 1-phosphatase activity4.43E-04
25GO:0052833: inositol monophosphate 4-phosphatase activity4.43E-04
26GO:0005464: UDP-xylose transmembrane transporter activity4.43E-04
27GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity4.43E-04
28GO:0048531: beta-1,3-galactosyltransferase activity4.43E-04
29GO:0008728: GTP diphosphokinase activity4.43E-04
30GO:0080045: quercetin 3'-O-glucosyltransferase activity4.43E-04
31GO:0050734: hydroxycinnamoyltransferase activity7.22E-04
32GO:0003935: GTP cyclohydrolase II activity7.22E-04
33GO:0030267: glyoxylate reductase (NADP) activity7.22E-04
34GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity7.22E-04
35GO:0048027: mRNA 5'-UTR binding1.03E-03
36GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.03E-03
37GO:0009882: blue light photoreceptor activity1.03E-03
38GO:0016987: sigma factor activity1.37E-03
39GO:0001053: plastid sigma factor activity1.37E-03
40GO:0080046: quercetin 4'-O-glucosyltransferase activity2.14E-03
41GO:0035673: oligopeptide transmembrane transporter activity2.14E-03
42GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.14E-03
43GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.14E-03
44GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.31E-03
45GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.57E-03
46GO:0051753: mannan synthase activity2.57E-03
47GO:0019899: enzyme binding3.03E-03
48GO:0042802: identical protein binding4.65E-03
49GO:0016844: strictosidine synthase activity5.10E-03
50GO:0005506: iron ion binding5.48E-03
51GO:0046982: protein heterodimerization activity5.83E-03
52GO:0035091: phosphatidylinositol binding6.33E-03
53GO:0015198: oligopeptide transporter activity6.89E-03
54GO:0051287: NAD binding7.08E-03
55GO:0004565: beta-galactosidase activity7.52E-03
56GO:0010329: auxin efflux transmembrane transporter activity7.52E-03
57GO:0008081: phosphoric diester hydrolase activity7.52E-03
58GO:0005315: inorganic phosphate transmembrane transporter activity7.52E-03
59GO:0000155: phosphorelay sensor kinase activity7.52E-03
60GO:0003774: motor activity8.19E-03
61GO:0031625: ubiquitin protein ligase binding8.73E-03
62GO:0008146: sulfotransferase activity8.87E-03
63GO:0052689: carboxylic ester hydrolase activity8.92E-03
64GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups9.63E-03
65GO:0005528: FK506 binding1.03E-02
66GO:0042803: protein homodimerization activity1.05E-02
67GO:0019825: oxygen binding1.15E-02
68GO:0003727: single-stranded RNA binding1.42E-02
69GO:0005525: GTP binding1.43E-02
70GO:0010181: FMN binding1.76E-02
71GO:0016762: xyloglucan:xyloglucosyl transferase activity1.94E-02
72GO:0008017: microtubule binding2.04E-02
73GO:0016791: phosphatase activity2.23E-02
74GO:0016722: oxidoreductase activity, oxidizing metal ions2.33E-02
75GO:0016413: O-acetyltransferase activity2.42E-02
76GO:0016597: amino acid binding2.42E-02
77GO:0016798: hydrolase activity, acting on glycosyl bonds2.84E-02
78GO:0008168: methyltransferase activity2.91E-02
79GO:0005096: GTPase activator activity3.16E-02
80GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.38E-02
81GO:0016740: transferase activity3.40E-02
82GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.61E-02
83GO:0003993: acid phosphatase activity3.73E-02
84GO:0020037: heme binding3.82E-02
85GO:0061630: ubiquitin protein ligase activity3.93E-02
86GO:0004364: glutathione transferase activity4.20E-02
87GO:0016757: transferase activity, transferring glycosyl groups4.51E-02
88GO:0043621: protein self-association4.57E-02
89GO:0004871: signal transducer activity4.67E-02
90GO:0015293: symporter activity4.70E-02
91GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.82E-02
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Gene type



Gene DE type