co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21770

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
4	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
5	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
6	GO:0010068: protoderm histogenesis	0.00E+00
7	GO:0042817: pyridoxal metabolic process	0.00E+00
8	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
9	GO:0015843: methylammonium transport	0.00E+00
10	GO:0070979: protein K11-linked ubiquitination	0.00E+00
11	GO:0043488: regulation of mRNA stability	0.00E+00
12	GO:0061157: mRNA destabilization	0.00E+00
13	GO:0009733: response to auxin	1.03E-10
14	GO:0009734: auxin-activated signaling pathway	5.18E-06
15	GO:0040008: regulation of growth	1.56E-05
16	GO:2000012: regulation of auxin polar transport	1.24E-04
17	GO:0030488: tRNA methylation	3.24E-04
18	GO:0043266: regulation of potassium ion transport	4.34E-04
19	GO:0043087: regulation of GTPase activity	4.34E-04
20	GO:2000021: regulation of ion homeostasis	4.34E-04
21	GO:0000066: mitochondrial ornithine transport	4.34E-04
22	GO:0051171: regulation of nitrogen compound metabolic process	4.34E-04
23	GO:0046620: regulation of organ growth	5.22E-04
24	GO:0000373: Group II intron splicing	7.63E-04
25	GO:0009638: phototropism	8.99E-04
26	GO:1900865: chloroplast RNA modification	8.99E-04
27	GO:1900871: chloroplast mRNA modification	9.39E-04
28	GO:0006423: cysteinyl-tRNA aminoacylation	9.39E-04
29	GO:0007154: cell communication	9.39E-04
30	GO:1900033: negative regulation of trichome patterning	9.39E-04
31	GO:0015804: neutral amino acid transport	9.39E-04
32	GO:0006739: NADP metabolic process	9.39E-04
33	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.53E-03
34	GO:0001578: microtubule bundle formation	1.53E-03
35	GO:0033591: response to L-ascorbic acid	1.53E-03
36	GO:0051127: positive regulation of actin nucleation	1.53E-03
37	GO:1902448: positive regulation of shade avoidance	1.53E-03
38	GO:0019419: sulfate reduction	1.53E-03
39	GO:0009226: nucleotide-sugar biosynthetic process	2.21E-03
40	GO:0006164: purine nucleotide biosynthetic process	2.21E-03
41	GO:0048645: animal organ formation	2.21E-03
42	GO:0008615: pyridoxine biosynthetic process	2.21E-03
43	GO:0010255: glucose mediated signaling pathway	2.21E-03
44	GO:0015696: ammonium transport	2.21E-03
45	GO:2000904: regulation of starch metabolic process	2.21E-03
46	GO:0006168: adenine salvage	2.21E-03
47	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.21E-03
48	GO:0006166: purine ribonucleoside salvage	2.21E-03
49	GO:0051513: regulation of monopolar cell growth	2.21E-03
50	GO:0007231: osmosensory signaling pathway	2.21E-03
51	GO:0030071: regulation of mitotic metaphase/anaphase transition	2.21E-03
52	GO:0051639: actin filament network formation	2.21E-03
53	GO:0044211: CTP salvage	2.21E-03
54	GO:0005992: trehalose biosynthetic process	2.45E-03
55	GO:0019344: cysteine biosynthetic process	2.45E-03
56	GO:0033500: carbohydrate homeostasis	2.97E-03
57	GO:0007020: microtubule nucleation	2.97E-03
58	GO:0044206: UMP salvage	2.97E-03
59	GO:0006734: NADH metabolic process	2.97E-03
60	GO:0048629: trichome patterning	2.97E-03
61	GO:0051764: actin crosslink formation	2.97E-03
62	GO:0051322: anaphase	2.97E-03
63	GO:0072488: ammonium transmembrane transport	2.97E-03
64	GO:0022622: root system development	2.97E-03
65	GO:0007275: multicellular organism development	3.49E-03
66	GO:0046785: microtubule polymerization	3.80E-03
67	GO:0044209: AMP salvage	3.80E-03
68	GO:0010158: abaxial cell fate specification	3.80E-03
69	GO:0032876: negative regulation of DNA endoreduplication	3.80E-03
70	GO:0007166: cell surface receptor signaling pathway	4.15E-03
71	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.18E-03
72	GO:0010087: phloem or xylem histogenesis	4.52E-03
73	GO:0006206: pyrimidine nucleobase metabolic process	4.71E-03
74	GO:0032973: amino acid export	4.71E-03
75	GO:0018258: protein O-linked glycosylation via hydroxyproline	4.71E-03
76	GO:0000741: karyogamy	4.71E-03
77	GO:0010405: arabinogalactan protein metabolic process	4.71E-03
78	GO:0016554: cytidine to uridine editing	4.71E-03
79	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.71E-03
80	GO:0009958: positive gravitropism	4.87E-03
81	GO:0005975: carbohydrate metabolic process	4.94E-03
82	GO:0042026: protein refolding	5.68E-03
83	GO:0042372: phylloquinone biosynthetic process	5.68E-03
84	GO:0006458: 'de novo' protein folding	5.68E-03
85	GO:0048280: vesicle fusion with Golgi apparatus	5.68E-03
86	GO:0080086: stamen filament development	5.68E-03
87	GO:0009658: chloroplast organization	6.58E-03
88	GO:0030307: positive regulation of cell growth	6.71E-03
89	GO:0032880: regulation of protein localization	6.71E-03
90	GO:0048528: post-embryonic root development	6.71E-03
91	GO:0043090: amino acid import	6.71E-03
92	GO:0010050: vegetative phase change	6.71E-03
93	GO:1901657: glycosyl compound metabolic process	6.87E-03
94	GO:0070413: trehalose metabolism in response to stress	7.81E-03
95	GO:0009850: auxin metabolic process	7.81E-03
96	GO:0009690: cytokinin metabolic process	7.81E-03
97	GO:0010078: maintenance of root meristem identity	7.81E-03
98	GO:0032875: regulation of DNA endoreduplication	7.81E-03
99	GO:0032544: plastid translation	8.97E-03
100	GO:0043562: cellular response to nitrogen levels	8.97E-03
101	GO:0006002: fructose 6-phosphate metabolic process	8.97E-03
102	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.62E-03
103	GO:0080144: amino acid homeostasis	1.02E-02
104	GO:0006189: 'de novo' IMP biosynthetic process	1.02E-02
105	GO:0000902: cell morphogenesis	1.02E-02
106	GO:0015780: nucleotide-sugar transport	1.02E-02
107	GO:0009051: pentose-phosphate shunt, oxidative branch	1.02E-02
108	GO:0010380: regulation of chlorophyll biosynthetic process	1.15E-02
109	GO:0071577: zinc II ion transmembrane transport	1.15E-02
110	GO:0006468: protein phosphorylation	1.20E-02
111	GO:0009299: mRNA transcription	1.28E-02
112	GO:0006535: cysteine biosynthetic process from serine	1.28E-02
113	GO:0000103: sulfate assimilation	1.28E-02
114	GO:0045036: protein targeting to chloroplast	1.28E-02
115	GO:0006896: Golgi to vacuole transport	1.28E-02
116	GO:0048527: lateral root development	1.32E-02
117	GO:0006865: amino acid transport	1.39E-02
118	GO:0006415: translational termination	1.42E-02
119	GO:1903507: negative regulation of nucleic acid-templated transcription	1.42E-02
120	GO:0009684: indoleacetic acid biosynthetic process	1.42E-02
121	GO:0006816: calcium ion transport	1.42E-02
122	GO:0009773: photosynthetic electron transport in photosystem I	1.42E-02
123	GO:0010152: pollen maturation	1.56E-02
124	GO:0045037: protein import into chloroplast stroma	1.56E-02
125	GO:0010582: floral meristem determinacy	1.56E-02
126	GO:0006839: mitochondrial transport	1.66E-02
127	GO:0009785: blue light signaling pathway	1.71E-02
128	GO:0010628: positive regulation of gene expression	1.71E-02
129	GO:0006006: glucose metabolic process	1.71E-02
130	GO:0030036: actin cytoskeleton organization	1.71E-02
131	GO:0009725: response to hormone	1.71E-02
132	GO:0010588: cotyledon vascular tissue pattern formation	1.71E-02
133	GO:0030154: cell differentiation	1.80E-02
134	GO:0010020: chloroplast fission	1.86E-02
135	GO:0048467: gynoecium development	1.86E-02
136	GO:0008283: cell proliferation	1.88E-02
137	GO:0009926: auxin polar transport	1.88E-02
138	GO:0010030: positive regulation of seed germination	2.02E-02
139	GO:0070588: calcium ion transmembrane transport	2.02E-02
140	GO:0008643: carbohydrate transport	2.03E-02
141	GO:0030150: protein import into mitochondrial matrix	2.35E-02
142	GO:0007010: cytoskeleton organization	2.35E-02
143	GO:0010187: negative regulation of seed germination	2.35E-02
144	GO:0051017: actin filament bundle assembly	2.35E-02
145	GO:0043622: cortical microtubule organization	2.52E-02
146	GO:0006418: tRNA aminoacylation for protein translation	2.52E-02
147	GO:0009585: red, far-red light phototransduction	2.53E-02
148	GO:0003333: amino acid transmembrane transport	2.70E-02
149	GO:0061077: chaperone-mediated protein folding	2.70E-02
150	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.87E-02
151	GO:0006730: one-carbon metabolic process	2.87E-02
152	GO:0007005: mitochondrion organization	2.87E-02
153	GO:0031348: negative regulation of defense response	2.87E-02
154	GO:0080092: regulation of pollen tube growth	2.87E-02
155	GO:0009686: gibberellin biosynthetic process	3.06E-02
156	GO:0010082: regulation of root meristem growth	3.06E-02
157	GO:0048367: shoot system development	3.09E-02
158	GO:0009740: gibberellic acid mediated signaling pathway	3.39E-02
159	GO:0008284: positive regulation of cell proliferation	3.44E-02
160	GO:0042147: retrograde transport, endosome to Golgi	3.44E-02
161	GO:0042335: cuticle development	3.63E-02
162	GO:0000271: polysaccharide biosynthetic process	3.63E-02
163	GO:0080022: primary root development	3.63E-02
164	GO:0042631: cellular response to water deprivation	3.63E-02
165	GO:0046777: protein autophosphorylation	3.70E-02
166	GO:0010197: polar nucleus fusion	3.83E-02
167	GO:0010268: brassinosteroid homeostasis	3.83E-02
168	GO:0045489: pectin biosynthetic process	3.83E-02
169	GO:0009416: response to light stimulus	3.84E-02
170	GO:0071555: cell wall organization	4.12E-02
171	GO:0048825: cotyledon development	4.24E-02
172	GO:0009851: auxin biosynthetic process	4.24E-02
173	GO:0006623: protein targeting to vacuole	4.24E-02
174	GO:0071554: cell wall organization or biogenesis	4.45E-02
175	GO:0006891: intra-Golgi vesicle-mediated transport	4.45E-02
176	GO:0016132: brassinosteroid biosynthetic process	4.45E-02
177	GO:0010583: response to cyclopentenone	4.66E-02
178	GO:0016032: viral process	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity	0.00E+00
2	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
3	GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity	0.00E+00
4	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
5	GO:0005290: L-histidine transmembrane transporter activity	4.34E-04
6	GO:0051777: ent-kaurenoate oxidase activity	4.34E-04
7	GO:0052856: NADHX epimerase activity	4.34E-04
8	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.34E-04
9	GO:0052857: NADPHX epimerase activity	4.34E-04
10	GO:0050139: nicotinate-N-glucosyltransferase activity	4.34E-04
11	GO:0004733: pyridoxamine-phosphate oxidase activity	4.34E-04
12	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.51E-04
13	GO:0009973: adenylyl-sulfate reductase activity	9.39E-04
14	GO:0000064: L-ornithine transmembrane transporter activity	9.39E-04
15	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	9.39E-04
16	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	9.39E-04
17	GO:0015172: acidic amino acid transmembrane transporter activity	9.39E-04
18	GO:0050017: L-3-cyanoalanine synthase activity	9.39E-04
19	GO:0017118: lipoyltransferase activity	9.39E-04
20	GO:0043425: bHLH transcription factor binding	9.39E-04
21	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	9.39E-04
22	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	9.39E-04
23	GO:0004817: cysteine-tRNA ligase activity	9.39E-04
24	GO:0004805: trehalose-phosphatase activity	1.05E-03
25	GO:0004557: alpha-galactosidase activity	1.53E-03
26	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.53E-03
27	GO:0052692: raffinose alpha-galactosidase activity	1.53E-03
28	GO:0015181: arginine transmembrane transporter activity	2.21E-03
29	GO:0003999: adenine phosphoribosyltransferase activity	2.21E-03
30	GO:0015189: L-lysine transmembrane transporter activity	2.21E-03
31	GO:0015175: neutral amino acid transmembrane transporter activity	2.21E-03
32	GO:0004176: ATP-dependent peptidase activity	2.97E-03
33	GO:0004845: uracil phosphoribosyltransferase activity	2.97E-03
34	GO:0004345: glucose-6-phosphate dehydrogenase activity	2.97E-03
35	GO:0080032: methyl jasmonate esterase activity	2.97E-03
36	GO:0016846: carbon-sulfur lyase activity	3.80E-03
37	GO:0016301: kinase activity	4.70E-03
38	GO:0042578: phosphoric ester hydrolase activity	4.71E-03
39	GO:0016208: AMP binding	4.71E-03
40	GO:0008519: ammonium transmembrane transporter activity	4.71E-03
41	GO:1990714: hydroxyproline O-galactosyltransferase activity	4.71E-03
42	GO:0044212: transcription regulatory region DNA binding	5.39E-03
43	GO:0015171: amino acid transmembrane transporter activity	5.42E-03
44	GO:0004849: uridine kinase activity	5.68E-03
45	GO:0003730: mRNA 3'-UTR binding	5.68E-03
46	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	5.68E-03
47	GO:0004124: cysteine synthase activity	5.68E-03
48	GO:0008195: phosphatidate phosphatase activity	5.68E-03
49	GO:0019899: enzyme binding	6.71E-03
50	GO:0005338: nucleotide-sugar transmembrane transporter activity	6.71E-03
51	GO:0003872: 6-phosphofructokinase activity	6.71E-03
52	GO:0003747: translation release factor activity	1.02E-02
53	GO:0102483: scopolin beta-glucosidase activity	1.03E-02
54	GO:0016829: lyase activity	1.10E-02
55	GO:0004713: protein tyrosine kinase activity	1.28E-02
56	GO:0008327: methyl-CpG binding	1.42E-02
57	GO:0044183: protein binding involved in protein folding	1.42E-02
58	GO:0004674: protein serine/threonine kinase activity	1.56E-02
59	GO:0008017: microtubule binding	1.59E-02
60	GO:0008422: beta-glucosidase activity	1.59E-02
61	GO:0015266: protein channel activity	1.71E-02
62	GO:0004089: carbonate dehydratase activity	1.71E-02
63	GO:0005262: calcium channel activity	1.71E-02
64	GO:0009982: pseudouridine synthase activity	1.71E-02
65	GO:0008083: growth factor activity	1.86E-02
66	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.86E-02
67	GO:0043621: protein self-association	2.03E-02
68	GO:0003714: transcription corepressor activity	2.35E-02
69	GO:0005385: zinc ion transmembrane transporter activity	2.35E-02
70	GO:0004857: enzyme inhibitor activity	2.35E-02
71	GO:0005528: FK506 binding	2.35E-02
72	GO:0008324: cation transmembrane transporter activity	2.52E-02
73	GO:0051087: chaperone binding	2.52E-02
74	GO:0016788: hydrolase activity, acting on ester bonds	2.67E-02
75	GO:0003964: RNA-directed DNA polymerase activity	2.70E-02
76	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.87E-02
77	GO:0030570: pectate lyase activity	3.06E-02
78	GO:0016757: transferase activity, transferring glycosyl groups	3.12E-02
79	GO:0003727: single-stranded RNA binding	3.25E-02
80	GO:0008514: organic anion transmembrane transporter activity	3.25E-02
81	GO:0004650: polygalacturonase activity	3.29E-02
82	GO:0016874: ligase activity	3.39E-02
83	GO:0004812: aminoacyl-tRNA ligase activity	3.44E-02
84	GO:0008536: Ran GTPase binding	3.83E-02
85	GO:0001085: RNA polymerase II transcription factor binding	3.83E-02
86	GO:0010181: FMN binding	4.03E-02
87	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.25E-02
88	GO:0016758: transferase activity, transferring hexosyl groups	4.38E-02
89	GO:0004871: signal transducer activity	4.50E-02
90	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.84E-02
91	GO:0000156: phosphorelay response regulator activity	4.88E-02
92	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.88E-02
93	GO:0051015: actin filament binding	4.88E-02