co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G13360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0016118: carotenoid catabolic process	0.00E+00
3	GO:0015979: photosynthesis	3.35E-18
4	GO:0015995: chlorophyll biosynthetic process	5.08E-09
5	GO:0009768: photosynthesis, light harvesting in photosystem I	5.45E-09
6	GO:0032544: plastid translation	1.17E-08
7	GO:0010207: photosystem II assembly	1.62E-07
8	GO:0018298: protein-chromophore linkage	3.33E-07
9	GO:0009735: response to cytokinin	1.07E-06
10	GO:0090391: granum assembly	3.63E-06
11	GO:0009773: photosynthetic electron transport in photosystem I	5.87E-06
12	GO:0010218: response to far red light	1.40E-05
13	GO:0010600: regulation of auxin biosynthetic process	1.59E-05
14	GO:0009637: response to blue light	1.87E-05
15	GO:0010114: response to red light	3.12E-05
16	GO:0010189: vitamin E biosynthetic process	5.48E-05
17	GO:0009854: oxidative photosynthetic carbon pathway	5.48E-05
18	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	5.48E-05
19	GO:0010196: nonphotochemical quenching	7.34E-05
20	GO:0009645: response to low light intensity stimulus	7.34E-05
21	GO:0010928: regulation of auxin mediated signaling pathway	9.51E-05
22	GO:0080093: regulation of photorespiration	1.40E-04
23	GO:0031998: regulation of fatty acid beta-oxidation	1.40E-04
24	GO:0034337: RNA folding	1.40E-04
25	GO:0016121: carotene catabolic process	3.20E-04
26	GO:0016124: xanthophyll catabolic process	3.20E-04
27	GO:0009767: photosynthetic electron transport chain	3.21E-04
28	GO:0006810: transport	3.21E-04
29	GO:0055114: oxidation-reduction process	3.48E-04
30	GO:0019253: reductive pentose-phosphate cycle	3.63E-04
31	GO:0006518: peptide metabolic process	5.26E-04
32	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	7.53E-04
33	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	7.53E-04
34	GO:0015976: carbon utilization	9.98E-04
35	GO:0009765: photosynthesis, light harvesting	9.98E-04
36	GO:0015994: chlorophyll metabolic process	9.98E-04
37	GO:0006536: glutamate metabolic process	9.98E-04
38	GO:0010236: plastoquinone biosynthetic process	1.26E-03
39	GO:0006097: glyoxylate cycle	1.26E-03
40	GO:0009107: lipoate biosynthetic process	1.26E-03
41	GO:0006656: phosphatidylcholine biosynthetic process	1.26E-03
42	GO:0043097: pyrimidine nucleoside salvage	1.26E-03
43	GO:0050665: hydrogen peroxide biosynthetic process	1.55E-03
44	GO:0042549: photosystem II stabilization	1.55E-03
45	GO:0006206: pyrimidine nucleobase metabolic process	1.55E-03
46	GO:0010190: cytochrome b6f complex assembly	1.55E-03
47	GO:1901259: chloroplast rRNA processing	1.86E-03
48	GO:0010161: red light signaling pathway	2.18E-03
49	GO:1900057: positive regulation of leaf senescence	2.18E-03
50	GO:0009704: de-etiolation	2.52E-03
51	GO:0009642: response to light intensity	2.52E-03
52	GO:0071482: cellular response to light stimulus	2.88E-03
53	GO:0009658: chloroplast organization	3.22E-03
54	GO:0006783: heme biosynthetic process	3.26E-03
55	GO:0010206: photosystem II repair	3.26E-03
56	GO:0006779: porphyrin-containing compound biosynthetic process	3.65E-03
57	GO:0009644: response to high light intensity	3.90E-03
58	GO:0006782: protoporphyrinogen IX biosynthetic process	4.06E-03
59	GO:0018119: peptidyl-cysteine S-nitrosylation	4.48E-03
60	GO:0009698: phenylpropanoid metabolic process	4.48E-03
61	GO:0019684: photosynthesis, light reaction	4.48E-03
62	GO:0043085: positive regulation of catalytic activity	4.48E-03
63	GO:0009585: red, far-red light phototransduction	4.85E-03
64	GO:0006412: translation	5.22E-03
65	GO:0006108: malate metabolic process	5.37E-03
66	GO:0006006: glucose metabolic process	5.37E-03
67	GO:0006094: gluconeogenesis	5.37E-03
68	GO:0005986: sucrose biosynthetic process	5.37E-03
69	GO:0006807: nitrogen compound metabolic process	5.37E-03
70	GO:0006096: glycolytic process	5.73E-03
71	GO:0007031: peroxisome organization	6.32E-03
72	GO:0007005: mitochondrion organization	8.92E-03
73	GO:0019748: secondary metabolic process	8.92E-03
74	GO:0010017: red or far-red light signaling pathway	8.92E-03
75	GO:0042742: defense response to bacterium	9.37E-03
76	GO:0009693: ethylene biosynthetic process	9.48E-03
77	GO:0042631: cellular response to water deprivation	1.12E-02
78	GO:0006662: glycerol ether metabolic process	1.18E-02
79	GO:0006814: sodium ion transport	1.25E-02
80	GO:0019252: starch biosynthetic process	1.31E-02
81	GO:0009416: response to light stimulus	1.44E-02
82	GO:0009409: response to cold	1.48E-02
83	GO:0010027: thylakoid membrane organization	1.79E-02
84	GO:0042128: nitrate assimilation	1.93E-02
85	GO:0016311: dephosphorylation	2.08E-02
86	GO:0007568: aging	2.39E-02
87	GO:0009853: photorespiration	2.55E-02
88	GO:0006099: tricarboxylic acid cycle	2.63E-02
89	GO:0034599: cellular response to oxidative stress	2.63E-02
90	GO:0030001: metal ion transport	2.80E-02
91	GO:0006869: lipid transport	3.02E-02
92	GO:0032259: methylation	3.25E-02
93	GO:0009624: response to nematode	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0008465: glycerate dehydrogenase activity	0.00E+00
2	GO:0046408: chlorophyll synthetase activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
5	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
6	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
7	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
8	GO:0090711: FMN hydrolase activity	0.00E+00
9	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
10	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
11	GO:0045550: geranylgeranyl reductase activity	0.00E+00
12	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
13	GO:0008974: phosphoribulokinase activity	0.00E+00
14	GO:0031409: pigment binding	2.97E-09
15	GO:0016168: chlorophyll binding	1.86E-07
16	GO:0048038: quinone binding	8.60E-05
17	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.40E-04
18	GO:0019843: rRNA binding	1.59E-04
19	GO:0000234: phosphoethanolamine N-methyltransferase activity	3.20E-04
20	GO:0008883: glutamyl-tRNA reductase activity	3.20E-04
21	GO:0047746: chlorophyllase activity	3.20E-04
22	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.20E-04
23	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	3.20E-04
24	GO:0016630: protochlorophyllide reductase activity	3.20E-04
25	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	5.26E-04
26	GO:0016992: lipoate synthase activity	5.26E-04
27	GO:0050307: sucrose-phosphate phosphatase activity	5.26E-04
28	GO:0003735: structural constituent of ribosome	6.41E-04
29	GO:0004351: glutamate decarboxylase activity	7.53E-04
30	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	7.53E-04
31	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	7.53E-04
32	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	7.53E-04
33	GO:0016851: magnesium chelatase activity	7.53E-04
34	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	7.53E-04
35	GO:0008891: glycolate oxidase activity	9.98E-04
36	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	9.98E-04
37	GO:0009011: starch synthase activity	9.98E-04
38	GO:0016491: oxidoreductase activity	1.01E-03
39	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	1.26E-03
40	GO:0016615: malate dehydrogenase activity	1.55E-03
41	GO:0004332: fructose-bisphosphate aldolase activity	1.55E-03
42	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.86E-03
43	GO:0030060: L-malate dehydrogenase activity	1.86E-03
44	GO:0004849: uridine kinase activity	1.86E-03
45	GO:0003993: acid phosphatase activity	2.93E-03
46	GO:0050661: NADP binding	3.19E-03
47	GO:0004185: serine-type carboxypeptidase activity	3.61E-03
48	GO:0051537: 2 iron, 2 sulfur cluster binding	3.90E-03
49	GO:0030234: enzyme regulator activity	4.06E-03
50	GO:0008047: enzyme activator activity	4.06E-03
51	GO:0051287: NAD binding	4.36E-03
52	GO:0005515: protein binding	4.67E-03
53	GO:0005315: inorganic phosphate transmembrane transporter activity	5.37E-03
54	GO:0004089: carbonate dehydratase activity	5.37E-03
55	GO:0031072: heat shock protein binding	5.37E-03
56	GO:0008266: poly(U) RNA binding	5.84E-03
57	GO:0008514: organic anion transmembrane transporter activity	1.01E-02
58	GO:0047134: protein-disulfide reductase activity	1.06E-02
59	GO:0004791: thioredoxin-disulfide reductase activity	1.25E-02
60	GO:0010181: FMN binding	1.25E-02
61	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.51E-02
62	GO:0042802: identical protein binding	1.52E-02
63	GO:0043531: ADP binding	2.03E-02
64	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.08E-02
65	GO:0004222: metalloendopeptidase activity	2.31E-02
66	GO:0003746: translation elongation factor activity	2.55E-02
67	GO:0042803: protein homodimerization activity	2.88E-02
68	GO:0043621: protein self-association	3.23E-02
69	GO:0015293: symporter activity	3.32E-02
70	GO:0009055: electron carrier activity	3.64E-02
71	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.35E-02
72	GO:0008289: lipid binding	4.70E-02
73	GO:0051082: unfolded protein binding	4.85E-02
74	GO:0015035: protein disulfide oxidoreductase activity	4.95E-02