Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G04430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002084: protein depalmitoylation0.00E+00
2GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
3GO:0097250: mitochondrial respiratory chain supercomplex assembly0.00E+00
4GO:0046865: terpenoid transport0.00E+00
5GO:0010055: atrichoblast differentiation0.00E+00
6GO:0006654: phosphatidic acid biosynthetic process0.00E+00
7GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
8GO:0010407: non-classical arabinogalactan protein metabolic process0.00E+00
9GO:0051707: response to other organism4.69E-06
10GO:0009814: defense response, incompatible interaction2.08E-05
11GO:0061158: 3'-UTR-mediated mRNA destabilization2.69E-05
12GO:0071446: cellular response to salicylic acid stimulus3.95E-04
13GO:0071076: RNA 3' uridylation4.18E-04
14GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.18E-04
15GO:0002143: tRNA wobble position uridine thiolation4.18E-04
16GO:0098789: pre-mRNA cleavage required for polyadenylation4.18E-04
17GO:0009700: indole phytoalexin biosynthetic process4.18E-04
18GO:0010230: alternative respiration4.18E-04
19GO:0042539: hypotonic salinity response4.18E-04
20GO:0042759: long-chain fatty acid biosynthetic process4.18E-04
21GO:0042868: antisense RNA metabolic process4.18E-04
22GO:0032107: regulation of response to nutrient levels4.18E-04
23GO:0031123: RNA 3'-end processing4.18E-04
24GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway4.18E-04
25GO:0015760: glucose-6-phosphate transport4.18E-04
26GO:1900150: regulation of defense response to fungus4.94E-04
27GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.52E-04
28GO:0042853: L-alanine catabolic process9.05E-04
29GO:0007584: response to nutrient9.05E-04
30GO:0051252: regulation of RNA metabolic process9.05E-04
31GO:0015712: hexose phosphate transport9.05E-04
32GO:0006996: organelle organization9.05E-04
33GO:0009156: ribonucleoside monophosphate biosynthetic process9.05E-04
34GO:0035335: peptidyl-tyrosine dephosphorylation9.05E-04
35GO:0015709: thiosulfate transport9.05E-04
36GO:0031204: posttranslational protein targeting to membrane, translocation9.05E-04
37GO:0071422: succinate transmembrane transport9.05E-04
38GO:0046939: nucleotide phosphorylation9.05E-04
39GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.05E-04
40GO:1902066: regulation of cell wall pectin metabolic process9.05E-04
41GO:0051607: defense response to virus1.07E-03
42GO:0009751: response to salicylic acid1.07E-03
43GO:0009627: systemic acquired resistance1.32E-03
44GO:0080168: abscisic acid transport1.47E-03
45GO:0048586: regulation of long-day photoperiodism, flowering1.47E-03
46GO:0032922: circadian regulation of gene expression1.47E-03
47GO:0017006: protein-tetrapyrrole linkage1.47E-03
48GO:0035436: triose phosphate transmembrane transport1.47E-03
49GO:1901672: positive regulation of systemic acquired resistance1.47E-03
50GO:0045836: positive regulation of meiotic nuclear division1.47E-03
51GO:0015783: GDP-fucose transport1.47E-03
52GO:0006517: protein deglycosylation1.47E-03
53GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.47E-03
54GO:0015692: lead ion transport1.47E-03
55GO:0060968: regulation of gene silencing1.47E-03
56GO:0015714: phosphoenolpyruvate transport1.47E-03
57GO:0006626: protein targeting to mitochondrion1.48E-03
58GO:0010731: protein glutathionylation2.13E-03
59GO:0010104: regulation of ethylene-activated signaling pathway2.13E-03
60GO:0043967: histone H4 acetylation2.13E-03
61GO:1902290: positive regulation of defense response to oomycetes2.13E-03
62GO:0006516: glycoprotein catabolic process2.13E-03
63GO:0046513: ceramide biosynthetic process2.13E-03
64GO:0006515: misfolded or incompletely synthesized protein catabolic process2.13E-03
65GO:0032877: positive regulation of DNA endoreduplication2.13E-03
66GO:0055089: fatty acid homeostasis2.13E-03
67GO:0000187: activation of MAPK activity2.13E-03
68GO:0060964: regulation of gene silencing by miRNA2.13E-03
69GO:0015729: oxaloacetate transport2.13E-03
70GO:0009584: detection of visible light2.13E-03
71GO:0010363: regulation of plant-type hypersensitive response2.86E-03
72GO:0010188: response to microbial phytotoxin2.86E-03
73GO:0015713: phosphoglycerate transport2.86E-03
74GO:0007112: male meiosis cytokinesis2.86E-03
75GO:0009165: nucleotide biosynthetic process2.86E-03
76GO:0010109: regulation of photosynthesis2.86E-03
77GO:0033320: UDP-D-xylose biosynthetic process2.86E-03
78GO:0010107: potassium ion import2.86E-03
79GO:0071456: cellular response to hypoxia3.07E-03
80GO:0009636: response to toxic substance3.51E-03
81GO:0045927: positive regulation of growth3.66E-03
82GO:0071423: malate transmembrane transport3.66E-03
83GO:0071368: cellular response to cytokinin stimulus3.66E-03
84GO:0031365: N-terminal protein amino acid modification3.66E-03
85GO:0009435: NAD biosynthetic process3.66E-03
86GO:0006952: defense response3.71E-03
87GO:0009617: response to bacterium4.06E-03
88GO:0060918: auxin transport4.52E-03
89GO:0045040: protein import into mitochondrial outer membrane4.52E-03
90GO:0006139: nucleobase-containing compound metabolic process4.52E-03
91GO:0042176: regulation of protein catabolic process4.52E-03
92GO:0002238: response to molecule of fungal origin4.52E-03
93GO:0009643: photosynthetic acclimation4.52E-03
94GO:0035435: phosphate ion transmembrane transport4.52E-03
95GO:0006777: Mo-molybdopterin cofactor biosynthetic process4.52E-03
96GO:0042732: D-xylose metabolic process4.52E-03
97GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity4.52E-03
98GO:0048544: recognition of pollen4.95E-03
99GO:0016310: phosphorylation5.29E-03
100GO:0006623: protein targeting to vacuole5.31E-03
101GO:0009749: response to glucose5.31E-03
102GO:0000911: cytokinesis by cell plate formation5.46E-03
103GO:0080113: regulation of seed growth5.46E-03
104GO:0009861: jasmonic acid and ethylene-dependent systemic resistance5.46E-03
105GO:0010193: response to ozone5.69E-03
106GO:0009620: response to fungus6.18E-03
107GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.45E-03
108GO:2000014: regulation of endosperm development6.45E-03
109GO:0008272: sulfate transport6.45E-03
110GO:0045995: regulation of embryonic development6.45E-03
111GO:0007050: cell cycle arrest6.45E-03
112GO:1900056: negative regulation of leaf senescence6.45E-03
113GO:0080186: developmental vegetative growth6.45E-03
114GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.50E-03
115GO:0009819: drought recovery7.50E-03
116GO:0010120: camalexin biosynthetic process8.61E-03
117GO:0030968: endoplasmic reticulum unfolded protein response8.61E-03
118GO:0006972: hyperosmotic response8.61E-03
119GO:2000031: regulation of salicylic acid mediated signaling pathway8.61E-03
120GO:0006002: fructose 6-phosphate metabolic process8.61E-03
121GO:0001558: regulation of cell growth8.61E-03
122GO:0009816: defense response to bacterium, incompatible interaction8.72E-03
123GO:0019432: triglyceride biosynthetic process9.78E-03
124GO:0010112: regulation of systemic acquired resistance9.78E-03
125GO:0048589: developmental growth9.78E-03
126GO:0015780: nucleotide-sugar transport9.78E-03
127GO:0008219: cell death1.08E-02
128GO:0048268: clathrin coat assembly1.10E-02
129GO:0008202: steroid metabolic process1.10E-02
130GO:1900426: positive regulation of defense response to bacterium1.10E-02
131GO:0043067: regulation of programmed cell death1.10E-02
132GO:0010267: production of ta-siRNAs involved in RNA interference1.10E-02
133GO:0090332: stomatal closure1.10E-02
134GO:0009407: toxin catabolic process1.19E-02
135GO:0043069: negative regulation of programmed cell death1.23E-02
136GO:0009631: cold acclimation1.25E-02
137GO:0010043: response to zinc ion1.25E-02
138GO:0000724: double-strand break repair via homologous recombination1.31E-02
139GO:0009089: lysine biosynthetic process via diaminopimelate1.36E-02
140GO:0042742: defense response to bacterium1.37E-02
141GO:0010150: leaf senescence1.40E-02
142GO:0016925: protein sumoylation1.50E-02
143GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.50E-02
144GO:0008361: regulation of cell size1.50E-02
145GO:0006631: fatty acid metabolic process1.63E-02
146GO:0010102: lateral root morphogenesis1.64E-02
147GO:2000028: regulation of photoperiodism, flowering1.64E-02
148GO:0050826: response to freezing1.64E-02
149GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.64E-02
150GO:0006541: glutamine metabolic process1.79E-02
151GO:0007034: vacuolar transport1.79E-02
152GO:0002237: response to molecule of bacterial origin1.79E-02
153GO:0000209: protein polyubiquitination1.84E-02
154GO:0042343: indole glucosinolate metabolic process1.94E-02
155GO:0007030: Golgi organization1.94E-02
156GO:0010030: positive regulation of seed germination1.94E-02
157GO:0070588: calcium ion transmembrane transport1.94E-02
158GO:0010053: root epidermal cell differentiation1.94E-02
159GO:0009225: nucleotide-sugar metabolic process1.94E-02
160GO:0006855: drug transmembrane transport2.07E-02
161GO:0006636: unsaturated fatty acid biosynthetic process2.09E-02
162GO:0034976: response to endoplasmic reticulum stress2.09E-02
163GO:0006071: glycerol metabolic process2.09E-02
164GO:0006468: protein phosphorylation2.10E-02
165GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.15E-02
166GO:0000165: MAPK cascade2.15E-02
167GO:0006338: chromatin remodeling2.25E-02
168GO:0006289: nucleotide-excision repair2.25E-02
169GO:0006487: protein N-linked glycosylation2.25E-02
170GO:0009116: nucleoside metabolic process2.25E-02
171GO:0007165: signal transduction2.26E-02
172GO:0009809: lignin biosynthetic process2.39E-02
173GO:0006486: protein glycosylation2.39E-02
174GO:0043622: cortical microtubule organization2.42E-02
175GO:0031408: oxylipin biosynthetic process2.59E-02
176GO:0051321: meiotic cell cycle2.59E-02
177GO:0048278: vesicle docking2.59E-02
178GO:0098542: defense response to other organism2.59E-02
179GO:0006334: nucleosome assembly2.59E-02
180GO:2000022: regulation of jasmonic acid mediated signaling pathway2.76E-02
181GO:0030433: ubiquitin-dependent ERAD pathway2.76E-02
182GO:0010017: red or far-red light signaling pathway2.76E-02
183GO:0009723: response to ethylene2.91E-02
184GO:0010082: regulation of root meristem growth2.94E-02
185GO:0009625: response to insect2.94E-02
186GO:0006012: galactose metabolic process2.94E-02
187GO:0005975: carbohydrate metabolic process3.01E-02
188GO:0009306: protein secretion3.11E-02
189GO:0010584: pollen exine formation3.11E-02
190GO:0042147: retrograde transport, endosome to Golgi3.30E-02
191GO:0008033: tRNA processing3.49E-02
192GO:0034220: ion transmembrane transport3.49E-02
193GO:0042391: regulation of membrane potential3.49E-02
194GO:0010051: xylem and phloem pattern formation3.49E-02
195GO:0010118: stomatal movement3.49E-02
196GO:0009958: positive gravitropism3.68E-02
197GO:0009960: endosperm development3.68E-02
198GO:0061025: membrane fusion3.87E-02
199GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.27E-02
200GO:0000302: response to reactive oxygen species4.27E-02
201GO:0006891: intra-Golgi vesicle-mediated transport4.27E-02
202GO:0002229: defense response to oomycetes4.27E-02
203GO:0031047: gene silencing by RNA4.48E-02
204GO:0016032: viral process4.48E-02
205GO:0030163: protein catabolic process4.68E-02
206GO:1901657: glycosyl compound metabolic process4.68E-02
RankGO TermAdjusted P value
1GO:0050513: glycoprotein 2-beta-D-xylosyltransferase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
4GO:0034338: short-chain carboxylesterase activity0.00E+00
5GO:0019205: nucleobase-containing compound kinase activity0.00E+00
6GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
7GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
8GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
9GO:0008734: L-aspartate oxidase activity0.00E+00
10GO:0051670: inulinase activity0.00E+00
11GO:0008092: cytoskeletal protein binding0.00E+00
12GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
13GO:0016301: kinase activity7.90E-05
14GO:0102425: myricetin 3-O-glucosyltransferase activity3.95E-04
15GO:0102360: daphnetin 3-O-glucosyltransferase activity3.95E-04
16GO:0016621: cinnamoyl-CoA reductase activity3.95E-04
17GO:0051669: fructan beta-fructosidase activity4.18E-04
18GO:1990381: ubiquitin-specific protease binding4.18E-04
19GO:0031219: levanase activity4.18E-04
20GO:0010285: L,L-diaminopimelate aminotransferase activity4.18E-04
21GO:0050265: RNA uridylyltransferase activity4.18E-04
22GO:1990188: euchromatin binding4.18E-04
23GO:0047893: flavonol 3-O-glucosyltransferase activity4.94E-04
24GO:0004708: MAP kinase kinase activity4.94E-04
25GO:0008428: ribonuclease inhibitor activity9.05E-04
26GO:0008805: carbon-monoxide oxygenase activity9.05E-04
27GO:0004338: glucan exo-1,3-beta-glucosidase activity9.05E-04
28GO:1901677: phosphate transmembrane transporter activity9.05E-04
29GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity9.05E-04
30GO:0015117: thiosulfate transmembrane transporter activity9.05E-04
31GO:0048531: beta-1,3-galactosyltransferase activity9.05E-04
32GO:0080045: quercetin 3'-O-glucosyltransferase activity9.05E-04
33GO:0050291: sphingosine N-acyltransferase activity9.05E-04
34GO:0009883: red or far-red light photoreceptor activity9.05E-04
35GO:0004809: tRNA (guanine-N2-)-methyltransferase activity9.05E-04
36GO:0015152: glucose-6-phosphate transmembrane transporter activity9.05E-04
37GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.98E-04
38GO:0008378: galactosyltransferase activity1.30E-03
39GO:0005310: dicarboxylic acid transmembrane transporter activity1.47E-03
40GO:0015141: succinate transmembrane transporter activity1.47E-03
41GO:0008020: G-protein coupled photoreceptor activity1.47E-03
42GO:0071917: triose-phosphate transmembrane transporter activity1.47E-03
43GO:0005457: GDP-fucose transmembrane transporter activity1.47E-03
44GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.47E-03
45GO:0004867: serine-type endopeptidase inhibitor activity1.87E-03
46GO:0030246: carbohydrate binding1.95E-03
47GO:0004792: thiosulfate sulfurtransferase activity2.13E-03
48GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.13E-03
49GO:0017077: oxidative phosphorylation uncoupler activity2.13E-03
50GO:0004749: ribose phosphate diphosphokinase activity2.13E-03
51GO:0019201: nucleotide kinase activity2.13E-03
52GO:0015131: oxaloacetate transmembrane transporter activity2.13E-03
53GO:0035529: NADH pyrophosphatase activity2.13E-03
54GO:0035251: UDP-glucosyltransferase activity2.80E-03
55GO:0009916: alternative oxidase activity2.86E-03
56GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway2.86E-03
57GO:0015120: phosphoglycerate transmembrane transporter activity2.86E-03
58GO:0015297: antiporter activity2.88E-03
59GO:0008641: small protein activating enzyme activity3.66E-03
60GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.66E-03
61GO:0004623: phospholipase A2 activity3.66E-03
62GO:0042285: xylosyltransferase activity3.66E-03
63GO:0008948: oxaloacetate decarboxylase activity3.66E-03
64GO:0031386: protein tag3.66E-03
65GO:0047631: ADP-ribose diphosphatase activity3.66E-03
66GO:0004040: amidase activity3.66E-03
67GO:0005524: ATP binding3.74E-03
68GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity4.52E-03
69GO:0000210: NAD+ diphosphatase activity4.52E-03
70GO:0035252: UDP-xylosyltransferase activity4.52E-03
71GO:0048040: UDP-glucuronate decarboxylase activity4.52E-03
72GO:0008474: palmitoyl-(protein) hydrolase activity4.52E-03
73GO:0004017: adenylate kinase activity5.46E-03
74GO:0003730: mRNA 3'-UTR binding5.46E-03
75GO:0004144: diacylglycerol O-acyltransferase activity5.46E-03
76GO:0004656: procollagen-proline 4-dioxygenase activity5.46E-03
77GO:0005261: cation channel activity5.46E-03
78GO:0070403: NAD+ binding5.46E-03
79GO:0009881: photoreceptor activity6.45E-03
80GO:0003872: 6-phosphofructokinase activity6.45E-03
81GO:0015140: malate transmembrane transporter activity6.45E-03
82GO:0004620: phospholipase activity6.45E-03
83GO:0008235: metalloexopeptidase activity6.45E-03
84GO:0004034: aldose 1-epimerase activity7.50E-03
85GO:0004525: ribonuclease III activity7.50E-03
86GO:0008142: oxysterol binding8.61E-03
87GO:0005267: potassium channel activity8.61E-03
88GO:0016758: transferase activity, transferring hexosyl groups8.94E-03
89GO:0030247: polysaccharide binding9.73E-03
90GO:0031490: chromatin DNA binding1.10E-02
91GO:0030234: enzyme regulator activity1.23E-02
92GO:0004568: chitinase activity1.23E-02
93GO:0005545: 1-phosphatidylinositol binding1.23E-02
94GO:0004177: aminopeptidase activity1.36E-02
95GO:0008559: xenobiotic-transporting ATPase activity1.36E-02
96GO:0047372: acylglycerol lipase activity1.36E-02
97GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.37E-02
98GO:0000049: tRNA binding1.50E-02
99GO:0015116: sulfate transmembrane transporter activity1.50E-02
100GO:0005388: calcium-transporting ATPase activity1.64E-02
101GO:0004565: beta-galactosidase activity1.64E-02
102GO:0005315: inorganic phosphate transmembrane transporter activity1.64E-02
103GO:0000155: phosphorelay sensor kinase activity1.64E-02
104GO:0004364: glutathione transferase activity1.70E-02
105GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.79E-02
106GO:0031624: ubiquitin conjugating enzyme binding1.79E-02
107GO:0003712: transcription cofactor activity1.94E-02
108GO:0030552: cAMP binding1.94E-02
109GO:0030553: cGMP binding1.94E-02
110GO:0004725: protein tyrosine phosphatase activity2.09E-02
111GO:0001046: core promoter sequence-specific DNA binding2.25E-02
112GO:0031418: L-ascorbic acid binding2.25E-02
113GO:0005216: ion channel activity2.42E-02
114GO:0016298: lipase activity2.48E-02
115GO:0004707: MAP kinase activity2.59E-02
116GO:0043531: ADP binding2.72E-02
117GO:0016779: nucleotidyltransferase activity2.76E-02
118GO:0004674: protein serine/threonine kinase activity2.92E-02
119GO:0008810: cellulase activity2.94E-02
120GO:0003727: single-stranded RNA binding3.11E-02
121GO:0080043: quercetin 3-O-glucosyltransferase activity3.11E-02
122GO:0080044: quercetin 7-O-glucosyltransferase activity3.11E-02
123GO:0003756: protein disulfide isomerase activity3.11E-02
124GO:0005102: receptor binding3.30E-02
125GO:0030551: cyclic nucleotide binding3.49E-02
126GO:0005249: voltage-gated potassium channel activity3.49E-02
127GO:0030276: clathrin binding3.68E-02
128GO:0044212: transcription regulatory region DNA binding3.75E-02
129GO:0010181: FMN binding3.87E-02
130GO:0016853: isomerase activity3.87E-02
131GO:0004871: signal transducer activity4.19E-02
132GO:0000156: phosphorelay response regulator activity4.68E-02
133GO:0030170: pyridoxal phosphate binding4.71E-02
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Gene type



Gene DE type