Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G04400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902009: positive regulation of toxin transport0.00E+00
2GO:1902289: negative regulation of defense response to oomycetes0.00E+00
3GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
4GO:0010200: response to chitin5.61E-07
5GO:0009751: response to salicylic acid1.58E-06
6GO:0009759: indole glucosinolate biosynthetic process1.13E-05
7GO:0043090: amino acid import2.24E-05
8GO:0051938: L-glutamate import6.58E-05
9GO:0007229: integrin-mediated signaling pathway6.58E-05
10GO:0019441: tryptophan catabolic process to kynurenine1.59E-04
11GO:0043091: L-arginine import1.59E-04
12GO:0006597: spermine biosynthetic process1.59E-04
13GO:0015914: phospholipid transport1.59E-04
14GO:0009838: abscission1.59E-04
15GO:0015802: basic amino acid transport1.59E-04
16GO:0009651: response to salt stress1.91E-04
17GO:0010476: gibberellin mediated signaling pathway2.69E-04
18GO:0010325: raffinose family oligosaccharide biosynthetic process2.69E-04
19GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway2.69E-04
20GO:0009062: fatty acid catabolic process2.69E-04
21GO:0009753: response to jasmonic acid3.17E-04
22GO:0045017: glycerolipid biosynthetic process3.90E-04
23GO:0034219: carbohydrate transmembrane transport3.90E-04
24GO:0042742: defense response to bacterium3.92E-04
25GO:0010188: response to microbial phytotoxin5.20E-04
26GO:0009939: positive regulation of gibberellic acid mediated signaling pathway5.20E-04
27GO:0009652: thigmotropism5.20E-04
28GO:0010508: positive regulation of autophagy5.20E-04
29GO:0009617: response to bacterium6.55E-04
30GO:0009611: response to wounding7.13E-04
31GO:0010264: myo-inositol hexakisphosphate biosynthetic process8.06E-04
32GO:0032973: amino acid export8.06E-04
33GO:1900425: negative regulation of defense response to bacterium8.06E-04
34GO:0006596: polyamine biosynthetic process8.06E-04
35GO:0080113: regulation of seed growth9.59E-04
36GO:0048444: floral organ morphogenesis9.59E-04
37GO:0045926: negative regulation of growth9.59E-04
38GO:0009612: response to mechanical stimulus9.59E-04
39GO:0006865: amino acid transport1.01E-03
40GO:0009723: response to ethylene1.08E-03
41GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.12E-03
42GO:1900056: negative regulation of leaf senescence1.12E-03
43GO:0006468: protein phosphorylation1.28E-03
44GO:0010099: regulation of photomorphogenesis1.47E-03
45GO:0010120: camalexin biosynthetic process1.47E-03
46GO:0009056: catabolic process1.65E-03
47GO:0009821: alkaloid biosynthetic process1.65E-03
48GO:0080144: amino acid homeostasis1.65E-03
49GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.85E-03
50GO:0006979: response to oxidative stress2.01E-03
51GO:0043069: negative regulation of programmed cell death2.05E-03
52GO:0009682: induced systemic resistance2.26E-03
53GO:0052544: defense response by callose deposition in cell wall2.26E-03
54GO:0009620: response to fungus2.31E-03
55GO:0008361: regulation of cell size2.48E-03
56GO:0055046: microgametogenesis2.70E-03
57GO:2000012: regulation of auxin polar transport2.70E-03
58GO:0009266: response to temperature stimulus2.93E-03
59GO:0002237: response to molecule of bacterial origin2.93E-03
60GO:0009058: biosynthetic process3.32E-03
61GO:0000162: tryptophan biosynthetic process3.40E-03
62GO:0030150: protein import into mitochondrial matrix3.65E-03
63GO:0009738: abscisic acid-activated signaling pathway3.79E-03
64GO:0046686: response to cadmium ion3.89E-03
65GO:0003333: amino acid transmembrane transport4.17E-03
66GO:0031348: negative regulation of defense response4.43E-03
67GO:0035428: hexose transmembrane transport4.43E-03
68GO:0009625: response to insect4.70E-03
69GO:0009739: response to gibberellin4.85E-03
70GO:0006470: protein dephosphorylation4.95E-03
71GO:0006662: glycerol ether metabolic process5.85E-03
72GO:0046323: glucose import5.85E-03
73GO:0009646: response to absence of light6.15E-03
74GO:0006635: fatty acid beta-oxidation6.76E-03
75GO:0016032: viral process7.08E-03
76GO:0019760: glucosinolate metabolic process7.73E-03
77GO:0051607: defense response to virus8.40E-03
78GO:0009615: response to virus8.74E-03
79GO:0046777: protein autophosphorylation8.88E-03
80GO:0009816: defense response to bacterium, incompatible interaction9.08E-03
81GO:0009414: response to water deprivation9.37E-03
82GO:0045892: negative regulation of transcription, DNA-templated1.01E-02
83GO:0009407: toxin catabolic process1.13E-02
84GO:0010043: response to zinc ion1.17E-02
85GO:0034599: cellular response to oxidative stress1.28E-02
86GO:0009744: response to sucrose1.49E-02
87GO:0009636: response to toxic substance1.62E-02
88GO:0006357: regulation of transcription from RNA polymerase II promoter1.63E-02
89GO:0031347: regulation of defense response1.70E-02
90GO:0009734: auxin-activated signaling pathway1.73E-02
91GO:0009624: response to nematode2.36E-02
92GO:0018105: peptidyl-serine phosphorylation2.41E-02
93GO:0009737: response to abscisic acid2.51E-02
94GO:0045893: positive regulation of transcription, DNA-templated2.51E-02
95GO:0009845: seed germination2.93E-02
96GO:0016036: cellular response to phosphate starvation3.32E-02
97GO:0040008: regulation of growth3.37E-02
98GO:0010150: leaf senescence3.49E-02
99GO:0006351: transcription, DNA-templated3.75E-02
100GO:0050832: defense response to fungus3.80E-02
101GO:0007166: cell surface receptor signaling pathway3.83E-02
102GO:0030154: cell differentiation4.79E-02
103GO:0009733: response to auxin4.94E-02
RankGO TermAdjusted P value
1GO:0034639: L-amino acid efflux transmembrane transporter activity0.00E+00
2GO:0016768: spermine synthase activity6.58E-05
3GO:2001147: camalexin binding6.58E-05
4GO:0010179: IAA-Ala conjugate hydrolase activity6.58E-05
5GO:0008809: carnitine racemase activity6.58E-05
6GO:2001227: quercitrin binding6.58E-05
7GO:0004048: anthranilate phosphoribosyltransferase activity6.58E-05
8GO:0010331: gibberellin binding1.59E-04
9GO:0004766: spermidine synthase activity1.59E-04
10GO:0004061: arylformamidase activity1.59E-04
11GO:0015171: amino acid transmembrane transporter activity1.84E-04
12GO:0032403: protein complex binding2.69E-04
13GO:0016656: monodehydroascorbate reductase (NADH) activity3.90E-04
14GO:0004165: dodecenoyl-CoA delta-isomerase activity3.90E-04
15GO:0015189: L-lysine transmembrane transporter activity3.90E-04
16GO:0015181: arginine transmembrane transporter activity3.90E-04
17GO:0005313: L-glutamate transmembrane transporter activity5.20E-04
18GO:0016301: kinase activity7.83E-04
19GO:0004144: diacylglycerol O-acyltransferase activity9.59E-04
20GO:0043295: glutathione binding1.12E-03
21GO:0004712: protein serine/threonine/tyrosine kinase activity1.14E-03
22GO:0005516: calmodulin binding1.27E-03
23GO:0016844: strictosidine synthase activity1.85E-03
24GO:0015174: basic amino acid transmembrane transporter activity1.85E-03
25GO:0043565: sequence-specific DNA binding1.92E-03
26GO:0051119: sugar transmembrane transporter activity3.16E-03
27GO:0001046: core promoter sequence-specific DNA binding3.65E-03
28GO:0043424: protein histidine kinase binding3.90E-03
29GO:0047134: protein-disulfide reductase activity5.26E-03
30GO:0004791: thioredoxin-disulfide reductase activity6.15E-03
31GO:0005355: glucose transmembrane transporter activity6.15E-03
32GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.40E-03
33GO:0008237: metallopeptidase activity8.06E-03
34GO:0005509: calcium ion binding8.72E-03
35GO:0009931: calcium-dependent protein serine/threonine kinase activity9.44E-03
36GO:0044212: transcription regulatory region DNA binding9.67E-03
37GO:0004683: calmodulin-dependent protein kinase activity9.79E-03
38GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting9.94E-03
39GO:0004722: protein serine/threonine phosphatase activity1.09E-02
40GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.11E-02
41GO:0050897: cobalt ion binding1.17E-02
42GO:0004364: glutathione transferase activity1.45E-02
43GO:0004672: protein kinase activity1.57E-02
44GO:0015293: symporter activity1.62E-02
45GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.84E-02
46GO:0008234: cysteine-type peptidase activity1.98E-02
47GO:0005524: ATP binding1.99E-02
48GO:0015035: protein disulfide oxidoreductase activity2.41E-02
49GO:0016746: transferase activity, transferring acyl groups2.41E-02
50GO:0015144: carbohydrate transmembrane transporter activity3.15E-02
51GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.32E-02
52GO:0005351: sugar:proton symporter activity3.43E-02
53GO:0003700: transcription factor activity, sequence-specific DNA binding3.55E-02
54GO:0005515: protein binding4.11E-02
55GO:0003824: catalytic activity4.83E-02
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Gene type



Gene DE type