GO Enrichment Analysis of Co-expressed Genes with
AT2G04160
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0023052: signaling | 0.00E+00 |
| 2 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 3.27E-08 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 5.20E-08 |
| 4 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.90E-06 |
| 5 | GO:0015798: myo-inositol transport | 5.94E-05 |
| 6 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 5.94E-05 |
| 7 | GO:0048768: root hair cell tip growth | 1.10E-04 |
| 8 | GO:0018345: protein palmitoylation | 1.44E-04 |
| 9 | GO:0051788: response to misfolded protein | 1.44E-04 |
| 10 | GO:0051258: protein polymerization | 1.44E-04 |
| 11 | GO:0010186: positive regulation of cellular defense response | 2.46E-04 |
| 12 | GO:0018342: protein prenylation | 2.46E-04 |
| 13 | GO:0010498: proteasomal protein catabolic process | 2.46E-04 |
| 14 | GO:0008652: cellular amino acid biosynthetic process | 2.46E-04 |
| 15 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.77E-04 |
| 16 | GO:0009647: skotomorphogenesis | 3.57E-04 |
| 17 | GO:0030163: protein catabolic process | 4.55E-04 |
| 18 | GO:0006661: phosphatidylinositol biosynthetic process | 4.78E-04 |
| 19 | GO:0006914: autophagy | 4.83E-04 |
| 20 | GO:0048015: phosphatidylinositol-mediated signaling | 6.05E-04 |
| 21 | GO:0009823: cytokinin catabolic process | 6.05E-04 |
| 22 | GO:0045040: protein import into mitochondrial outer membrane | 7.40E-04 |
| 23 | GO:0002238: response to molecule of fungal origin | 7.40E-04 |
| 24 | GO:0006555: methionine metabolic process | 7.40E-04 |
| 25 | GO:0043248: proteasome assembly | 7.40E-04 |
| 26 | GO:0006694: steroid biosynthetic process | 8.82E-04 |
| 27 | GO:0019509: L-methionine salvage from methylthioadenosine | 8.82E-04 |
| 28 | GO:0048528: post-embryonic root development | 1.03E-03 |
| 29 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.18E-03 |
| 30 | GO:0048766: root hair initiation | 1.18E-03 |
| 31 | GO:0009932: cell tip growth | 1.35E-03 |
| 32 | GO:0007186: G-protein coupled receptor signaling pathway | 1.35E-03 |
| 33 | GO:0046685: response to arsenic-containing substance | 1.52E-03 |
| 34 | GO:0009736: cytokinin-activated signaling pathway | 1.57E-03 |
| 35 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.63E-03 |
| 36 | GO:0090332: stomatal closure | 1.69E-03 |
| 37 | GO:0048765: root hair cell differentiation | 2.07E-03 |
| 38 | GO:0046856: phosphatidylinositol dephosphorylation | 2.07E-03 |
| 39 | GO:0006913: nucleocytoplasmic transport | 2.07E-03 |
| 40 | GO:0005986: sucrose biosynthetic process | 2.47E-03 |
| 41 | GO:0010540: basipetal auxin transport | 2.68E-03 |
| 42 | GO:0046854: phosphatidylinositol phosphorylation | 2.89E-03 |
| 43 | GO:0010053: root epidermal cell differentiation | 2.89E-03 |
| 44 | GO:0006863: purine nucleobase transport | 3.11E-03 |
| 45 | GO:0000162: tryptophan biosynthetic process | 3.11E-03 |
| 46 | GO:0080147: root hair cell development | 3.34E-03 |
| 47 | GO:0010431: seed maturation | 3.81E-03 |
| 48 | GO:0035428: hexose transmembrane transport | 4.05E-03 |
| 49 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.25E-03 |
| 50 | GO:0009625: response to insect | 4.30E-03 |
| 51 | GO:0006606: protein import into nucleus | 5.07E-03 |
| 52 | GO:0006885: regulation of pH | 5.34E-03 |
| 53 | GO:0046323: glucose import | 5.34E-03 |
| 54 | GO:0010154: fruit development | 5.34E-03 |
| 55 | GO:0048825: cotyledon development | 5.89E-03 |
| 56 | GO:0006623: protein targeting to vacuole | 5.89E-03 |
| 57 | GO:0016126: sterol biosynthetic process | 7.97E-03 |
| 58 | GO:0006950: response to stress | 8.92E-03 |
| 59 | GO:0048767: root hair elongation | 9.93E-03 |
| 60 | GO:0000160: phosphorelay signal transduction system | 9.93E-03 |
| 61 | GO:0048527: lateral root development | 1.06E-02 |
| 62 | GO:0015031: protein transport | 1.11E-02 |
| 63 | GO:0006839: mitochondrial transport | 1.24E-02 |
| 64 | GO:0006887: exocytosis | 1.28E-02 |
| 65 | GO:0006810: transport | 1.33E-02 |
| 66 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.42E-02 |
| 67 | GO:0006812: cation transport | 1.59E-02 |
| 68 | GO:0006813: potassium ion transport | 1.67E-02 |
| 69 | GO:0009553: embryo sac development | 2.10E-02 |
| 70 | GO:0006396: RNA processing | 2.19E-02 |
| 71 | GO:0016310: phosphorylation | 2.54E-02 |
| 72 | GO:0009845: seed germination | 2.67E-02 |
| 73 | GO:0009739: response to gibberellin | 3.44E-02 |
| 74 | GO:0007166: cell surface receptor signaling pathway | 3.49E-02 |
| 75 | GO:0009414: response to water deprivation | 3.77E-02 |
| 76 | GO:0030154: cell differentiation | 4.20E-02 |
| 77 | GO:0009860: pollen tube growth | 4.56E-02 |
| 78 | GO:0055114: oxidation-reduction process | 4.57E-02 |
| 79 | GO:0048366: leaf development | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 2 | GO:0036402: proteasome-activating ATPase activity | 3.27E-08 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 4.18E-08 |
| 4 | GO:0017025: TBP-class protein binding | 1.99E-06 |
| 5 | GO:0008233: peptidase activity | 7.49E-06 |
| 6 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 1.44E-04 |
| 7 | GO:0005366: myo-inositol:proton symporter activity | 1.44E-04 |
| 8 | GO:0010297: heteropolysaccharide binding | 1.44E-04 |
| 9 | GO:0050307: sucrose-phosphate phosphatase activity | 2.46E-04 |
| 10 | GO:0052692: raffinose alpha-galactosidase activity | 2.46E-04 |
| 11 | GO:0004324: ferredoxin-NADP+ reductase activity | 2.46E-04 |
| 12 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 2.46E-04 |
| 13 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 2.46E-04 |
| 14 | GO:0004557: alpha-galactosidase activity | 2.46E-04 |
| 15 | GO:0016887: ATPase activity | 4.57E-04 |
| 16 | GO:0004834: tryptophan synthase activity | 4.78E-04 |
| 17 | GO:0019139: cytokinin dehydrogenase activity | 6.05E-04 |
| 18 | GO:0017137: Rab GTPase binding | 6.05E-04 |
| 19 | GO:0047714: galactolipase activity | 7.40E-04 |
| 20 | GO:0051920: peroxiredoxin activity | 8.82E-04 |
| 21 | GO:0016209: antioxidant activity | 1.18E-03 |
| 22 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 1.35E-03 |
| 23 | GO:0004430: 1-phosphatidylinositol 4-kinase activity | 1.35E-03 |
| 24 | GO:0009982: pseudouridine synthase activity | 2.47E-03 |
| 25 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.47E-03 |
| 26 | GO:0008131: primary amine oxidase activity | 2.68E-03 |
| 27 | GO:0043130: ubiquitin binding | 3.34E-03 |
| 28 | GO:0043424: protein histidine kinase binding | 3.57E-03 |
| 29 | GO:0005345: purine nucleobase transmembrane transporter activity | 3.57E-03 |
| 30 | GO:0005451: monovalent cation:proton antiporter activity | 5.07E-03 |
| 31 | GO:0008536: Ran GTPase binding | 5.34E-03 |
| 32 | GO:0005355: glucose transmembrane transporter activity | 5.61E-03 |
| 33 | GO:0015299: solute:proton antiporter activity | 5.61E-03 |
| 34 | GO:0000287: magnesium ion binding | 5.75E-03 |
| 35 | GO:0000156: phosphorelay response regulator activity | 6.75E-03 |
| 36 | GO:0015385: sodium:proton antiporter activity | 6.75E-03 |
| 37 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 8.70E-03 |
| 38 | GO:0004721: phosphoprotein phosphatase activity | 8.92E-03 |
| 39 | GO:0004806: triglyceride lipase activity | 8.92E-03 |
| 40 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 9.69E-03 |
| 41 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.06E-02 |
| 42 | GO:0043565: sequence-specific DNA binding | 1.91E-02 |
| 43 | GO:0016874: ligase activity | 2.06E-02 |
| 44 | GO:0030170: pyridoxal phosphate binding | 2.72E-02 |
| 45 | GO:0015144: carbohydrate transmembrane transporter activity | 2.86E-02 |
| 46 | GO:0008565: protein transporter activity | 2.86E-02 |
| 47 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.02E-02 |
| 48 | GO:0005351: sugar:proton symporter activity | 3.12E-02 |
| 49 | GO:0016757: transferase activity, transferring glycosyl groups | 3.80E-02 |
| 50 | GO:0044212: transcription regulatory region DNA binding | 3.86E-02 |
| 51 | GO:0004601: peroxidase activity | 4.33E-02 |
| 52 | GO:0050660: flavin adenine dinucleotide binding | 4.80E-02 |