co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G03420

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
3	GO:0090470: shoot organ boundary specification	0.00E+00
4	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
5	GO:0042821: pyridoxal biosynthetic process	0.00E+00
6	GO:0042407: cristae formation	0.00E+00
7	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
8	GO:0009106: lipoate metabolic process	0.00E+00
9	GO:0090042: tubulin deacetylation	0.00E+00
10	GO:0006223: uracil salvage	0.00E+00
11	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
12	GO:0090279: regulation of calcium ion import	0.00E+00
13	GO:0042820: vitamin B6 catabolic process	0.00E+00
14	GO:0071474: cellular hyperosmotic response	0.00E+00
15	GO:0070125: mitochondrial translational elongation	0.00E+00
16	GO:0009249: protein lipoylation	0.00E+00
17	GO:0019685: photosynthesis, dark reaction	0.00E+00
18	GO:0015995: chlorophyll biosynthetic process	3.99E-09
19	GO:0071482: cellular response to light stimulus	1.29E-07
20	GO:0006783: heme biosynthetic process	1.48E-05
21	GO:0006782: protoporphyrinogen IX biosynthetic process	2.60E-05
22	GO:2001141: regulation of RNA biosynthetic process	3.12E-05
23	GO:0006352: DNA-templated transcription, initiation	3.32E-05
24	GO:0010207: photosystem II assembly	6.23E-05
25	GO:0016120: carotene biosynthetic process	8.85E-05
26	GO:0000476: maturation of 4.5S rRNA	2.92E-04
27	GO:0009443: pyridoxal 5'-phosphate salvage	2.92E-04
28	GO:0000967: rRNA 5'-end processing	2.92E-04
29	GO:0015671: oxygen transport	2.92E-04
30	GO:0043686: co-translational protein modification	2.92E-04
31	GO:0032544: plastid translation	3.57E-04
32	GO:0006779: porphyrin-containing compound biosynthetic process	5.10E-04
33	GO:0010027: thylakoid membrane organization	5.95E-04
34	GO:0010198: synergid death	6.40E-04
35	GO:0006423: cysteinyl-tRNA aminoacylation	6.40E-04
36	GO:0006435: threonyl-tRNA aminoacylation	6.40E-04
37	GO:1900871: chloroplast mRNA modification	6.40E-04
38	GO:0006432: phenylalanyl-tRNA aminoacylation	6.40E-04
39	GO:0018026: peptidyl-lysine monomethylation	6.40E-04
40	GO:0000256: allantoin catabolic process	6.40E-04
41	GO:0051262: protein tetramerization	6.40E-04
42	GO:0034470: ncRNA processing	6.40E-04
43	GO:0010275: NAD(P)H dehydrogenase complex assembly	6.40E-04
44	GO:0005983: starch catabolic process	7.84E-04
45	GO:0015979: photosynthesis	1.03E-03
46	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.04E-03
47	GO:0010136: ureide catabolic process	1.04E-03
48	GO:0015940: pantothenate biosynthetic process	1.04E-03
49	GO:0005977: glycogen metabolic process	1.04E-03
50	GO:0010601: positive regulation of auxin biosynthetic process	1.48E-03
51	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.48E-03
52	GO:0006145: purine nucleobase catabolic process	1.48E-03
53	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.48E-03
54	GO:0033014: tetrapyrrole biosynthetic process	1.48E-03
55	GO:0006424: glutamyl-tRNA aminoacylation	1.48E-03
56	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.48E-03
57	GO:0010371: regulation of gibberellin biosynthetic process	1.48E-03
58	GO:0009102: biotin biosynthetic process	1.48E-03
59	GO:0048511: rhythmic process	1.66E-03
60	GO:0009765: photosynthesis, light harvesting	1.99E-03
61	GO:0044206: UMP salvage	1.99E-03
62	GO:0071483: cellular response to blue light	1.99E-03
63	GO:0010021: amylopectin biosynthetic process	1.99E-03
64	GO:0016117: carotenoid biosynthetic process	2.32E-03
65	GO:0000304: response to singlet oxygen	2.54E-03
66	GO:0080110: sporopollenin biosynthetic process	2.54E-03
67	GO:0043097: pyrimidine nucleoside salvage	2.54E-03
68	GO:0046907: intracellular transport	2.54E-03
69	GO:0032543: mitochondrial translation	2.54E-03
70	GO:0045038: protein import into chloroplast thylakoid membrane	2.54E-03
71	GO:0031365: N-terminal protein amino acid modification	2.54E-03
72	GO:0009107: lipoate biosynthetic process	2.54E-03
73	GO:0016123: xanthophyll biosynthetic process	2.54E-03
74	GO:0009658: chloroplast organization	2.66E-03
75	GO:0006206: pyrimidine nucleobase metabolic process	3.14E-03
76	GO:0006655: phosphatidylglycerol biosynthetic process	3.14E-03
77	GO:0010190: cytochrome b6f complex assembly	3.14E-03
78	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.14E-03
79	GO:1901259: chloroplast rRNA processing	3.77E-03
80	GO:0048437: floral organ development	4.45E-03
81	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	4.45E-03
82	GO:0048564: photosystem I assembly	5.17E-03
83	GO:0006605: protein targeting	5.17E-03
84	GO:0000105: histidine biosynthetic process	5.17E-03
85	GO:0022900: electron transport chain	5.92E-03
86	GO:0017004: cytochrome complex assembly	5.92E-03
87	GO:0009817: defense response to fungus, incompatible interaction	6.29E-03
88	GO:0006413: translational initiation	6.44E-03
89	GO:0019432: triglyceride biosynthetic process	6.71E-03
90	GO:0009821: alkaloid biosynthetic process	6.71E-03
91	GO:0010206: photosystem II repair	6.71E-03
92	GO:0007568: aging	7.28E-03
93	GO:0043067: regulation of programmed cell death	7.54E-03
94	GO:0031425: chloroplast RNA processing	7.54E-03
95	GO:0015031: protein transport	7.66E-03
96	GO:0008285: negative regulation of cell proliferation	9.30E-03
97	GO:0019684: photosynthesis, light reaction	9.30E-03
98	GO:0006415: translational termination	9.30E-03
99	GO:0009089: lysine biosynthetic process via diaminopimelate	9.30E-03
100	GO:0006631: fatty acid metabolic process	9.49E-03
101	GO:0016024: CDP-diacylglycerol biosynthetic process	1.02E-02
102	GO:0009725: response to hormone	1.12E-02
103	GO:0009767: photosynthetic electron transport chain	1.12E-02
104	GO:0090351: seedling development	1.32E-02
105	GO:0009735: response to cytokinin	1.39E-02
106	GO:0000162: tryptophan biosynthetic process	1.43E-02
107	GO:0009116: nucleoside metabolic process	1.54E-02
108	GO:0016575: histone deacetylation	1.65E-02
109	GO:0007017: microtubule-based process	1.65E-02
110	GO:0010073: meristem maintenance	1.65E-02
111	GO:0055114: oxidation-reduction process	1.68E-02
112	GO:0061077: chaperone-mediated protein folding	1.76E-02
113	GO:0031408: oxylipin biosynthetic process	1.76E-02
114	GO:0016114: terpenoid biosynthetic process	1.76E-02
115	GO:0035428: hexose transmembrane transport	1.88E-02
116	GO:0080092: regulation of pollen tube growth	1.88E-02
117	GO:0019748: secondary metabolic process	1.88E-02
118	GO:0010227: floral organ abscission	2.00E-02
119	GO:0006012: galactose metabolic process	2.00E-02
120	GO:0010584: pollen exine formation	2.12E-02
121	GO:0009306: protein secretion	2.12E-02
122	GO:0051028: mRNA transport	2.25E-02
123	GO:0010197: polar nucleus fusion	2.50E-02
124	GO:0046323: glucose import	2.50E-02
125	GO:0042752: regulation of circadian rhythm	2.64E-02
126	GO:0019252: starch biosynthetic process	2.77E-02
127	GO:0009556: microsporogenesis	2.77E-02
128	GO:0006397: mRNA processing	2.78E-02
129	GO:0032502: developmental process	3.05E-02
130	GO:1901657: glycosyl compound metabolic process	3.19E-02
131	GO:0016126: sterol biosynthetic process	3.78E-02
132	GO:0009627: systemic acquired resistance	4.09E-02
133	GO:0018298: protein-chromophore linkage	4.57E-02
134	GO:0006412: translation	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
2	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
3	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
4	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
5	GO:0051721: protein phosphatase 2A binding	0.00E+00
6	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
7	GO:0042903: tubulin deacetylase activity	0.00E+00
8	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
9	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
10	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
11	GO:0050613: delta14-sterol reductase activity	0.00E+00
12	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
13	GO:0043014: alpha-tubulin binding	0.00E+00
14	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
15	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
16	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
17	GO:0033819: lipoyl(octanoyl) transferase activity	0.00E+00
18	GO:0005048: signal sequence binding	0.00E+00
19	GO:0004076: biotin synthase activity	0.00E+00
20	GO:0016987: sigma factor activity	3.96E-07
21	GO:0001053: plastid sigma factor activity	3.96E-07
22	GO:0070402: NADPH binding	1.39E-05
23	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.61E-05
24	GO:0016851: magnesium chelatase activity	3.12E-05
25	GO:0005528: FK506 binding	1.04E-04
26	GO:0005227: calcium activated cation channel activity	2.92E-04
27	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	2.92E-04
28	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	2.92E-04
29	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.92E-04
30	GO:0050308: sugar-phosphatase activity	2.92E-04
31	GO:0004325: ferrochelatase activity	2.92E-04
32	GO:0004856: xylulokinase activity	2.92E-04
33	GO:0042586: peptide deformylase activity	2.92E-04
34	GO:0019203: carbohydrate phosphatase activity	2.92E-04
35	GO:0005080: protein kinase C binding	2.92E-04
36	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.92E-04
37	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	2.92E-04
38	GO:0005344: oxygen transporter activity	2.92E-04
39	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	2.92E-04
40	GO:0004817: cysteine-tRNA ligase activity	6.40E-04
41	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	6.40E-04
42	GO:0004826: phenylalanine-tRNA ligase activity	6.40E-04
43	GO:0016630: protochlorophyllide reductase activity	6.40E-04
44	GO:0004829: threonine-tRNA ligase activity	6.40E-04
45	GO:0019156: isoamylase activity	6.40E-04
46	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	6.40E-04
47	GO:0017118: lipoyltransferase activity	6.40E-04
48	GO:0080041: ADP-ribose pyrophosphohydrolase activity	6.40E-04
49	GO:0016415: octanoyltransferase activity	6.40E-04
50	GO:0031072: heat shock protein binding	8.88E-04
51	GO:0003913: DNA photolyase activity	1.04E-03
52	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.04E-03
53	GO:0004751: ribose-5-phosphate isomerase activity	1.04E-03
54	GO:0030267: glyoxylate reductase (NADP) activity	1.04E-03
55	GO:0003746: translation elongation factor activity	1.12E-03
56	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.48E-03
57	GO:0048487: beta-tubulin binding	1.48E-03
58	GO:0004792: thiosulfate sulfurtransferase activity	1.48E-03
59	GO:0016149: translation release factor activity, codon specific	1.48E-03
60	GO:0043023: ribosomal large subunit binding	1.48E-03
61	GO:0004045: aminoacyl-tRNA hydrolase activity	1.99E-03
62	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.99E-03
63	GO:0016279: protein-lysine N-methyltransferase activity	1.99E-03
64	GO:0004845: uracil phosphoribosyltransferase activity	1.99E-03
65	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.99E-03
66	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.24E-03
67	GO:0008374: O-acyltransferase activity	2.54E-03
68	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.54E-03
69	GO:0003959: NADPH dehydrogenase activity	2.54E-03
70	GO:0004629: phospholipase C activity	3.14E-03
71	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.14E-03
72	GO:0004556: alpha-amylase activity	3.14E-03
73	GO:2001070: starch binding	3.14E-03
74	GO:0048038: quinone binding	3.34E-03
75	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.77E-03
76	GO:0005261: cation channel activity	3.77E-03
77	GO:0004849: uridine kinase activity	3.77E-03
78	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.77E-03
79	GO:0004435: phosphatidylinositol phospholipase C activity	3.77E-03
80	GO:0009881: photoreceptor activity	4.45E-03
81	GO:0008312: 7S RNA binding	5.17E-03
82	GO:0004034: aldose 1-epimerase activity	5.17E-03
83	GO:0004033: aldo-keto reductase (NADP) activity	5.17E-03
84	GO:0005337: nucleoside transmembrane transporter activity	5.17E-03
85	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	5.92E-03
86	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	6.71E-03
87	GO:0003747: translation release factor activity	6.71E-03
88	GO:0016844: strictosidine synthase activity	7.54E-03
89	GO:0016787: hydrolase activity	7.66E-03
90	GO:0003743: translation initiation factor activity	8.58E-03
91	GO:0005089: Rho guanyl-nucleotide exchange factor activity	9.30E-03
92	GO:0000049: tRNA binding	1.02E-02
93	GO:0005525: GTP binding	1.06E-02
94	GO:0051537: 2 iron, 2 sulfur cluster binding	1.12E-02
95	GO:0008266: poly(U) RNA binding	1.22E-02
96	GO:0016788: hydrolase activity, acting on ester bonds	1.26E-02
97	GO:0005509: calcium ion binding	1.32E-02
98	GO:0004407: histone deacetylase activity	1.54E-02
99	GO:0051082: unfolded protein binding	1.99E-02
100	GO:0022891: substrate-specific transmembrane transporter activity	2.00E-02
101	GO:0003756: protein disulfide isomerase activity	2.12E-02
102	GO:0016491: oxidoreductase activity	2.41E-02
103	GO:0008080: N-acetyltransferase activity	2.50E-02
104	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.56E-02
105	GO:0005355: glucose transmembrane transporter activity	2.64E-02
106	GO:0050662: coenzyme binding	2.64E-02
107	GO:0016853: isomerase activity	2.64E-02
108	GO:0004252: serine-type endopeptidase activity	2.76E-02
109	GO:0004872: receptor activity	2.77E-02
110	GO:0003729: mRNA binding	2.96E-02
111	GO:0015144: carbohydrate transmembrane transporter activity	2.98E-02
112	GO:0005351: sugar:proton symporter activity	3.36E-02
113	GO:0008483: transaminase activity	3.48E-02
114	GO:0005200: structural constituent of cytoskeleton	3.48E-02
115	GO:0102483: scopolin beta-glucosidase activity	4.25E-02
116	GO:0004721: phosphoprotein phosphatase activity	4.25E-02
117	GO:0008236: serine-type peptidase activity	4.41E-02
118	GO:0016887: ATPase activity	4.53E-02
119	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.57E-02
120	GO:0004222: metalloendopeptidase activity	4.89E-02