Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G03120

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process0.00E+00
2GO:0036503: ERAD pathway0.00E+00
3GO:0006497: protein lipidation0.00E+00
4GO:0072722: response to amitrole0.00E+00
5GO:0010055: atrichoblast differentiation0.00E+00
6GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
7GO:0010401: pectic galactan metabolic process0.00E+00
8GO:0043132: NAD transport3.35E-06
9GO:0009814: defense response, incompatible interaction5.41E-06
10GO:0006102: isocitrate metabolic process2.58E-04
11GO:0032491: detection of molecule of fungal origin2.70E-04
12GO:0060862: negative regulation of floral organ abscission2.70E-04
13GO:0009968: negative regulation of signal transduction2.70E-04
14GO:0032107: regulation of response to nutrient levels2.70E-04
15GO:0016337: single organismal cell-cell adhesion2.70E-04
16GO:0009623: response to parasitic fungus2.70E-04
17GO:0043547: positive regulation of GTPase activity2.70E-04
18GO:0035352: NAD transmembrane transport2.70E-04
19GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.70E-04
20GO:0008202: steroid metabolic process4.56E-04
21GO:0015012: heparan sulfate proteoglycan biosynthetic process5.94E-04
22GO:0046939: nucleotide phosphorylation5.94E-04
23GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.94E-04
24GO:0006024: glycosaminoglycan biosynthetic process5.94E-04
25GO:0052541: plant-type cell wall cellulose metabolic process5.94E-04
26GO:0002240: response to molecule of oomycetes origin5.94E-04
27GO:0031349: positive regulation of defense response5.94E-04
28GO:0010541: acropetal auxin transport5.94E-04
29GO:0019725: cellular homeostasis5.94E-04
30GO:0002237: response to molecule of bacterial origin8.95E-04
31GO:0010253: UDP-rhamnose biosynthetic process9.62E-04
32GO:0051176: positive regulation of sulfur metabolic process9.62E-04
33GO:0044375: regulation of peroxisome size9.62E-04
34GO:0090630: activation of GTPase activity9.62E-04
35GO:0010186: positive regulation of cellular defense response9.62E-04
36GO:0009410: response to xenobiotic stimulus9.62E-04
37GO:0010272: response to silver ion9.62E-04
38GO:2000082: regulation of L-ascorbic acid biosynthetic process9.62E-04
39GO:0008333: endosome to lysosome transport9.62E-04
40GO:0006886: intracellular protein transport9.68E-04
41GO:0009225: nucleotide-sugar metabolic process9.99E-04
42GO:0006099: tricarboxylic acid cycle1.02E-03
43GO:0000187: activation of MAPK activity1.38E-03
44GO:0070301: cellular response to hydrogen peroxide1.38E-03
45GO:0072334: UDP-galactose transmembrane transport1.38E-03
46GO:0015858: nucleoside transport1.38E-03
47GO:0016998: cell wall macromolecule catabolic process1.48E-03
48GO:0071456: cellular response to hypoxia1.62E-03
49GO:0060548: negative regulation of cell death1.84E-03
50GO:0045227: capsule polysaccharide biosynthetic process1.84E-03
51GO:0048638: regulation of developmental growth1.84E-03
52GO:0033358: UDP-L-arabinose biosynthetic process1.84E-03
53GO:0006221: pyrimidine nucleotide biosynthetic process1.84E-03
54GO:1990937: xylan acetylation1.84E-03
55GO:0007165: signal transduction1.91E-03
56GO:0015031: protein transport1.92E-03
57GO:0042127: regulation of cell proliferation1.92E-03
58GO:0042147: retrograde transport, endosome to Golgi2.08E-03
59GO:0031365: N-terminal protein amino acid modification2.35E-03
60GO:0009435: NAD biosynthetic process2.35E-03
61GO:0006665: sphingolipid metabolic process2.35E-03
62GO:0000304: response to singlet oxygen2.35E-03
63GO:0010183: pollen tube guidance2.79E-03
64GO:0002238: response to molecule of fungal origin2.90E-03
65GO:0010942: positive regulation of cell death2.90E-03
66GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.90E-03
67GO:0042176: regulation of protein catabolic process2.90E-03
68GO:0010315: auxin efflux2.90E-03
69GO:0060918: auxin transport2.90E-03
70GO:0006139: nucleobase-containing compound metabolic process2.90E-03
71GO:0003006: developmental process involved in reproduction2.90E-03
72GO:0009117: nucleotide metabolic process2.90E-03
73GO:0016192: vesicle-mediated transport3.35E-03
74GO:0006694: steroid biosynthetic process3.49E-03
75GO:0006914: autophagy3.61E-03
76GO:0009567: double fertilization forming a zygote and endosperm3.61E-03
77GO:0009610: response to symbiotic fungus4.12E-03
78GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.12E-03
79GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process4.12E-03
80GO:0009615: response to virus4.30E-03
81GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.77E-03
82GO:0030091: protein repair4.77E-03
83GO:0009850: auxin metabolic process4.77E-03
84GO:0010204: defense response signaling pathway, resistance gene-independent5.47E-03
85GO:0015780: nucleotide-sugar transport6.20E-03
86GO:0007338: single fertilization6.20E-03
87GO:0048527: lateral root development6.49E-03
88GO:0009631: cold acclimation6.49E-03
89GO:0090332: stomatal closure6.96E-03
90GO:0048268: clathrin coat assembly6.96E-03
91GO:0034599: cellular response to oxidative stress7.44E-03
92GO:0051555: flavonol biosynthetic process7.75E-03
93GO:0006032: chitin catabolic process7.75E-03
94GO:0006839: mitochondrial transport8.11E-03
95GO:0000272: polysaccharide catabolic process8.58E-03
96GO:0048229: gametophyte development8.58E-03
97GO:0055046: microgametogenesis1.03E-02
98GO:0031347: regulation of defense response1.11E-02
99GO:0050832: defense response to fungus1.20E-02
100GO:0070588: calcium ion transmembrane transport1.22E-02
101GO:0007033: vacuole organization1.22E-02
102GO:0007031: peroxisome organization1.22E-02
103GO:0010039: response to iron ion1.22E-02
104GO:0042742: defense response to bacterium1.24E-02
105GO:0006486: protein glycosylation1.24E-02
106GO:0042753: positive regulation of circadian rhythm1.32E-02
107GO:0034976: response to endoplasmic reticulum stress1.32E-02
108GO:0000027: ribosomal large subunit assembly1.42E-02
109GO:0009863: salicylic acid mediated signaling pathway1.42E-02
110GO:0030150: protein import into mitochondrial matrix1.42E-02
111GO:0010073: meristem maintenance1.52E-02
112GO:0048511: rhythmic process1.62E-02
113GO:0080092: regulation of pollen tube growth1.73E-02
114GO:0016226: iron-sulfur cluster assembly1.73E-02
115GO:0009411: response to UV1.84E-02
116GO:0071369: cellular response to ethylene stimulus1.84E-02
117GO:0010227: floral organ abscission1.84E-02
118GO:0006012: galactose metabolic process1.84E-02
119GO:0016310: phosphorylation2.17E-02
120GO:0010051: xylem and phloem pattern formation2.19E-02
121GO:0010087: phloem or xylem histogenesis2.19E-02
122GO:0010182: sugar mediated signaling pathway2.31E-02
123GO:0048868: pollen tube development2.31E-02
124GO:0006885: regulation of pH2.31E-02
125GO:0055072: iron ion homeostasis2.55E-02
126GO:0006623: protein targeting to vacuole2.55E-02
127GO:0009749: response to glucose2.55E-02
128GO:0006891: intra-Golgi vesicle-mediated transport2.68E-02
129GO:0032502: developmental process2.81E-02
130GO:0030163: protein catabolic process2.94E-02
131GO:0010150: leaf senescence3.06E-02
132GO:0007166: cell surface receptor signaling pathway3.50E-02
133GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.63E-02
134GO:0009627: systemic acquired resistance3.77E-02
135GO:0006906: vesicle fusion3.77E-02
136GO:0055114: oxidation-reduction process4.02E-02
137GO:0008219: cell death4.21E-02
138GO:0009817: defense response to fungus, incompatible interaction4.21E-02
139GO:0009737: response to abscisic acid4.41E-02
140GO:0009738: abscisic acid-activated signaling pathway4.46E-02
141GO:0009834: plant-type secondary cell wall biogenesis4.51E-02
142GO:0006811: ion transport4.51E-02
143GO:0009555: pollen development4.64E-02
144GO:0007568: aging4.66E-02
RankGO TermAdjusted P value
1GO:0044610: FMN transmembrane transporter activity0.00E+00
2GO:0008752: FMN reductase activity0.00E+00
3GO:0018580: nitronate monooxygenase activity0.00E+00
4GO:0019205: nucleobase-containing compound kinase activity0.00E+00
5GO:0051766: inositol trisphosphate kinase activity0.00E+00
6GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
7GO:0008734: L-aspartate oxidase activity0.00E+00
8GO:0051670: inulinase activity0.00E+00
9GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
10GO:0052873: FMN reductase (NADPH) activity0.00E+00
11GO:0070191: methionine-R-sulfoxide reductase activity0.00E+00
12GO:0051724: NAD transporter activity3.35E-06
13GO:0019779: Atg8 activating enzyme activity3.35E-06
14GO:0004449: isocitrate dehydrogenase (NAD+) activity2.72E-05
15GO:0019786: Atg8-specific protease activity2.70E-04
16GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity2.70E-04
17GO:0010179: IAA-Ala conjugate hydrolase activity2.70E-04
18GO:0000824: inositol tetrakisphosphate 3-kinase activity2.70E-04
19GO:0051669: fructan beta-fructosidase activity2.70E-04
20GO:0047326: inositol tetrakisphosphate 5-kinase activity2.70E-04
21GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity2.70E-04
22GO:0048037: cofactor binding2.70E-04
23GO:0015230: FAD transmembrane transporter activity2.70E-04
24GO:0031219: levanase activity2.70E-04
25GO:0008142: oxysterol binding3.19E-04
26GO:0004385: guanylate kinase activity5.94E-04
27GO:0004776: succinate-CoA ligase (GDP-forming) activity5.94E-04
28GO:0015228: coenzyme A transmembrane transporter activity5.94E-04
29GO:0052739: phosphatidylserine 1-acylhydrolase activity5.94E-04
30GO:0008460: dTDP-glucose 4,6-dehydratase activity5.94E-04
31GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity5.94E-04
32GO:0010280: UDP-L-rhamnose synthase activity5.94E-04
33GO:0000774: adenyl-nucleotide exchange factor activity5.94E-04
34GO:0004127: cytidylate kinase activity5.94E-04
35GO:0032934: sterol binding5.94E-04
36GO:0008805: carbon-monoxide oxygenase activity5.94E-04
37GO:0004775: succinate-CoA ligase (ADP-forming) activity5.94E-04
38GO:1990585: hydroxyproline O-arabinosyltransferase activity5.94E-04
39GO:0050377: UDP-glucose 4,6-dehydratase activity5.94E-04
40GO:0050736: O-malonyltransferase activity5.94E-04
41GO:0051980: iron-nicotianamine transmembrane transporter activity5.94E-04
42GO:0005096: GTPase activator activity7.68E-04
43GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity9.62E-04
44GO:0042409: caffeoyl-CoA O-methyltransferase activity9.62E-04
45GO:0003955: NAD(P)H dehydrogenase (quinone) activity9.62E-04
46GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.38E-03
47GO:0019201: nucleotide kinase activity1.38E-03
48GO:0035529: NADH pyrophosphatase activity1.38E-03
49GO:0009041: uridylate kinase activity1.38E-03
50GO:0010178: IAA-amino acid conjugate hydrolase activity1.38E-03
51GO:0004301: epoxide hydrolase activity1.84E-03
52GO:0050373: UDP-arabinose 4-epimerase activity1.84E-03
53GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.84E-03
54GO:0019776: Atg8 ligase activity1.84E-03
55GO:0004930: G-protein coupled receptor activity1.84E-03
56GO:0005496: steroid binding2.35E-03
57GO:0047631: ADP-ribose diphosphatase activity2.35E-03
58GO:0008374: O-acyltransferase activity2.35E-03
59GO:0005459: UDP-galactose transmembrane transporter activity2.35E-03
60GO:0080122: AMP transmembrane transporter activity2.35E-03
61GO:0016853: isomerase activity2.60E-03
62GO:0022857: transmembrane transporter activity2.81E-03
63GO:1990538: xylan O-acetyltransferase activity2.90E-03
64GO:0000210: NAD+ diphosphatase activity2.90E-03
65GO:0003978: UDP-glucose 4-epimerase activity3.49E-03
66GO:0004656: procollagen-proline 4-dioxygenase activity3.49E-03
67GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.49E-03
68GO:0051020: GTPase binding3.49E-03
69GO:0015217: ADP transmembrane transporter activity3.49E-03
70GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.49E-03
71GO:0004017: adenylate kinase activity3.49E-03
72GO:0005347: ATP transmembrane transporter activity3.49E-03
73GO:0008320: protein transmembrane transporter activity4.12E-03
74GO:0005338: nucleotide-sugar transmembrane transporter activity4.12E-03
75GO:0008235: metalloexopeptidase activity4.12E-03
76GO:0004525: ribonuclease III activity4.77E-03
77GO:0004708: MAP kinase kinase activity4.77E-03
78GO:0004714: transmembrane receptor protein tyrosine kinase activity4.77E-03
79GO:0005544: calcium-dependent phospholipid binding4.77E-03
80GO:0008565: protein transporter activity5.07E-03
81GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.47E-03
82GO:0015297: antiporter activity5.73E-03
83GO:0008417: fucosyltransferase activity6.20E-03
84GO:0071949: FAD binding6.20E-03
85GO:0016301: kinase activity6.63E-03
86GO:0030234: enzyme regulator activity7.75E-03
87GO:0004568: chitinase activity7.75E-03
88GO:0008171: O-methyltransferase activity7.75E-03
89GO:0005545: 1-phosphatidylinositol binding7.75E-03
90GO:0008047: enzyme activator activity7.75E-03
91GO:0004713: protein tyrosine kinase activity7.75E-03
92GO:0004177: aminopeptidase activity8.58E-03
93GO:0008559: xenobiotic-transporting ATPase activity8.58E-03
94GO:0015198: oligopeptide transporter activity9.44E-03
95GO:0005388: calcium-transporting ATPase activity1.03E-02
96GO:0051287: NAD binding1.11E-02
97GO:0004175: endopeptidase activity1.12E-02
98GO:0004867: serine-type endopeptidase inhibitor activity1.22E-02
99GO:0008061: chitin binding1.22E-02
100GO:0005524: ATP binding1.22E-02
101GO:0031418: L-ascorbic acid binding1.42E-02
102GO:0001046: core promoter sequence-specific DNA binding1.42E-02
103GO:0004674: protein serine/threonine kinase activity1.44E-02
104GO:0051087: chaperone binding1.52E-02
105GO:0035251: UDP-glucosyltransferase activity1.62E-02
106GO:0004298: threonine-type endopeptidase activity1.62E-02
107GO:0003756: protein disulfide isomerase activity1.95E-02
108GO:0047134: protein-disulfide reductase activity2.07E-02
109GO:0005102: receptor binding2.07E-02
110GO:0005451: monovalent cation:proton antiporter activity2.19E-02
111GO:0030276: clathrin binding2.31E-02
112GO:0001085: RNA polymerase II transcription factor binding2.31E-02
113GO:0004791: thioredoxin-disulfide reductase activity2.43E-02
114GO:0015299: solute:proton antiporter activity2.43E-02
115GO:0010181: FMN binding2.43E-02
116GO:0015385: sodium:proton antiporter activity2.94E-02
117GO:0016722: oxidoreductase activity, oxidizing metal ions3.21E-02
118GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.21E-02
119GO:0008237: metallopeptidase activity3.21E-02
120GO:0051213: dioxygenase activity3.48E-02
121GO:0042802: identical protein binding3.88E-02
122GO:0004806: triglyceride lipase activity3.91E-02
123GO:0030247: polysaccharide binding3.91E-02
124GO:0016887: ATPase activity3.93E-02
125GO:0016787: hydrolase activity4.45E-02
126GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.66E-02
127GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.97E-02
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Gene type



Gene DE type