co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
2	GO:0015739: sialic acid transport	0.00E+00
3	GO:0071311: cellular response to acetate	0.00E+00
4	GO:0015843: methylammonium transport	0.00E+00
5	GO:0031222: arabinan catabolic process	0.00E+00
6	GO:0070979: protein K11-linked ubiquitination	0.00E+00
7	GO:0071260: cellular response to mechanical stimulus	0.00E+00
8	GO:0061157: mRNA destabilization	0.00E+00
9	GO:0018131: oxazole or thiazole biosynthetic process	0.00E+00
10	GO:0009157: deoxyribonucleoside monophosphate biosynthetic process	0.00E+00
11	GO:0009606: tropism	0.00E+00
12	GO:0010068: protoderm histogenesis	0.00E+00
13	GO:0007638: mechanosensory behavior	0.00E+00
14	GO:0009734: auxin-activated signaling pathway	1.92E-11
15	GO:0046620: regulation of organ growth	9.16E-11
16	GO:0009733: response to auxin	1.07E-09
17	GO:0040008: regulation of growth	8.73E-08
18	GO:0009926: auxin polar transport	1.19E-07
19	GO:0007389: pattern specification process	6.58E-05
20	GO:0000373: Group II intron splicing	8.82E-05
21	GO:0010252: auxin homeostasis	2.87E-04
22	GO:0005992: trehalose biosynthetic process	4.87E-04
23	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.93E-04
24	GO:0010480: microsporocyte differentiation	6.22E-04
25	GO:0043609: regulation of carbon utilization	6.22E-04
26	GO:0006436: tryptophanyl-tRNA aminoacylation	6.22E-04
27	GO:0034080: CENP-A containing nucleosome assembly	6.22E-04
28	GO:0000066: mitochondrial ornithine transport	6.22E-04
29	GO:0051418: microtubule nucleation by microtubule organizing center	6.22E-04
30	GO:0070509: calcium ion import	6.22E-04
31	GO:0042255: ribosome assembly	8.83E-04
32	GO:0006002: fructose 6-phosphate metabolic process	1.07E-03
33	GO:0009658: chloroplast organization	1.10E-03
34	GO:0071497: cellular response to freezing	1.34E-03
35	GO:0009786: regulation of asymmetric cell division	1.34E-03
36	GO:2000123: positive regulation of stomatal complex development	1.34E-03
37	GO:0033566: gamma-tubulin complex localization	1.34E-03
38	GO:0010569: regulation of double-strand break repair via homologous recombination	1.34E-03
39	GO:0009638: phototropism	1.52E-03
40	GO:0032502: developmental process	1.67E-03
41	GO:0006816: calcium ion transport	2.05E-03
42	GO:0006760: folic acid-containing compound metabolic process	2.20E-03
43	GO:0071398: cellular response to fatty acid	2.20E-03
44	GO:0007052: mitotic spindle organization	2.20E-03
45	GO:0051127: positive regulation of actin nucleation	2.20E-03
46	GO:0006000: fructose metabolic process	2.20E-03
47	GO:0071230: cellular response to amino acid stimulus	2.20E-03
48	GO:0031145: anaphase-promoting complex-dependent catabolic process	2.20E-03
49	GO:0007275: multicellular organism development	2.46E-03
50	GO:0071555: cell wall organization	2.53E-03
51	GO:0009767: photosynthetic electron transport chain	2.68E-03
52	GO:2000012: regulation of auxin polar transport	2.68E-03
53	GO:0030154: cell differentiation	3.16E-03
54	GO:2000904: regulation of starch metabolic process	3.20E-03
55	GO:0031048: chromatin silencing by small RNA	3.20E-03
56	GO:0043572: plastid fission	3.20E-03
57	GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center	3.20E-03
58	GO:0034508: centromere complex assembly	3.20E-03
59	GO:1902476: chloride transmembrane transport	3.20E-03
60	GO:0007231: osmosensory signaling pathway	3.20E-03
61	GO:0030071: regulation of mitotic metaphase/anaphase transition	3.20E-03
62	GO:0051639: actin filament network formation	3.20E-03
63	GO:0009800: cinnamic acid biosynthetic process	3.20E-03
64	GO:0044211: CTP salvage	3.20E-03
65	GO:0019048: modulation by virus of host morphology or physiology	3.20E-03
66	GO:0048645: animal organ formation	3.20E-03
67	GO:0090307: mitotic spindle assembly	3.20E-03
68	GO:0015696: ammonium transport	3.20E-03
69	GO:0046739: transport of virus in multicellular host	3.20E-03
70	GO:0032981: mitochondrial respiratory chain complex I assembly	3.20E-03
71	GO:0070588: calcium ion transmembrane transport	3.40E-03
72	GO:0009742: brassinosteroid mediated signaling pathway	3.69E-03
73	GO:0000160: phosphorelay signal transduction system	3.70E-03
74	GO:0009416: response to light stimulus	3.84E-03
75	GO:0051567: histone H3-K9 methylation	4.32E-03
76	GO:0044205: 'de novo' UMP biosynthetic process	4.32E-03
77	GO:0044206: UMP salvage	4.32E-03
78	GO:0009165: nucleotide biosynthetic process	4.32E-03
79	GO:1901141: regulation of lignin biosynthetic process	4.32E-03
80	GO:0051764: actin crosslink formation	4.32E-03
81	GO:0072488: ammonium transmembrane transport	4.32E-03
82	GO:0033500: carbohydrate homeostasis	4.32E-03
83	GO:0022622: root system development	4.32E-03
84	GO:2000038: regulation of stomatal complex development	4.32E-03
85	GO:0046656: folic acid biosynthetic process	4.32E-03
86	GO:0006306: DNA methylation	5.11E-03
87	GO:0009904: chloroplast accumulation movement	5.55E-03
88	GO:0006544: glycine metabolic process	5.55E-03
89	GO:1902183: regulation of shoot apical meristem development	5.55E-03
90	GO:0016123: xanthophyll biosynthetic process	5.55E-03
91	GO:0010438: cellular response to sulfur starvation	5.55E-03
92	GO:0010158: abaxial cell fate specification	5.55E-03
93	GO:0032876: negative regulation of DNA endoreduplication	5.55E-03
94	GO:0010375: stomatal complex patterning	5.55E-03
95	GO:0006839: mitochondrial transport	5.57E-03
96	GO:0009686: gibberellin biosynthetic process	6.12E-03
97	GO:0010082: regulation of root meristem growth	6.12E-03
98	GO:0006559: L-phenylalanine catabolic process	6.88E-03
99	GO:0006206: pyrimidine nucleobase metabolic process	6.88E-03
100	GO:0016458: gene silencing	6.88E-03
101	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.88E-03
102	GO:0009228: thiamine biosynthetic process	6.88E-03
103	GO:0006563: L-serine metabolic process	6.88E-03
104	GO:0010405: arabinogalactan protein metabolic process	6.88E-03
105	GO:0009959: negative gravitropism	6.88E-03
106	GO:0006655: phosphatidylglycerol biosynthetic process	6.88E-03
107	GO:0006139: nucleobase-containing compound metabolic process	6.88E-03
108	GO:0042793: transcription from plastid promoter	6.88E-03
109	GO:0010315: auxin efflux	6.88E-03
110	GO:0008643: carbohydrate transport	7.21E-03
111	GO:0009942: longitudinal axis specification	8.32E-03
112	GO:0046654: tetrahydrofolate biosynthetic process	8.32E-03
113	GO:0009903: chloroplast avoidance movement	8.32E-03
114	GO:0030488: tRNA methylation	8.32E-03
115	GO:0080086: stamen filament development	8.32E-03
116	GO:0006342: chromatin silencing	8.43E-03
117	GO:0009958: positive gravitropism	8.43E-03
118	GO:0009736: cytokinin-activated signaling pathway	9.56E-03
119	GO:0030307: positive regulation of cell growth	9.86E-03
120	GO:0032880: regulation of protein localization	9.86E-03
121	GO:0010161: red light signaling pathway	9.86E-03
122	GO:0009610: response to symbiotic fungus	9.86E-03
123	GO:0048528: post-embryonic root development	9.86E-03
124	GO:0006821: chloride transport	9.86E-03
125	GO:0010050: vegetative phase change	9.86E-03
126	GO:0048437: floral organ development	9.86E-03
127	GO:0010583: response to cyclopentenone	1.12E-02
128	GO:0009704: de-etiolation	1.15E-02
129	GO:0032875: regulation of DNA endoreduplication	1.15E-02
130	GO:0006353: DNA-templated transcription, termination	1.15E-02
131	GO:0048766: root hair initiation	1.15E-02
132	GO:0070413: trehalose metabolism in response to stress	1.15E-02
133	GO:0010439: regulation of glucosinolate biosynthetic process	1.15E-02
134	GO:0001522: pseudouridine synthesis	1.15E-02
135	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.15E-02
136	GO:0009850: auxin metabolic process	1.15E-02
137	GO:0048364: root development	1.29E-02
138	GO:0010497: plasmodesmata-mediated intercellular transport	1.32E-02
139	GO:0010100: negative regulation of photomorphogenesis	1.32E-02
140	GO:0006526: arginine biosynthetic process	1.32E-02
141	GO:0010099: regulation of photomorphogenesis	1.32E-02
142	GO:0009827: plant-type cell wall modification	1.32E-02
143	GO:0009740: gibberellic acid mediated signaling pathway	1.39E-02
144	GO:0051607: defense response to virus	1.43E-02
145	GO:0006783: heme biosynthetic process	1.50E-02
146	GO:0000902: cell morphogenesis	1.50E-02
147	GO:0015780: nucleotide-sugar transport	1.50E-02
148	GO:0009051: pentose-phosphate shunt, oxidative branch	1.50E-02
149	GO:2000024: regulation of leaf development	1.50E-02
150	GO:0031425: chloroplast RNA processing	1.69E-02
151	GO:0035999: tetrahydrofolate interconversion	1.69E-02
152	GO:0055085: transmembrane transport	1.79E-02
153	GO:0010411: xyloglucan metabolic process	1.79E-02
154	GO:0030422: production of siRNA involved in RNA interference	1.89E-02
155	GO:0048829: root cap development	1.89E-02
156	GO:0009641: shade avoidance	1.89E-02
157	GO:0009299: mRNA transcription	1.89E-02
158	GO:0006535: cysteine biosynthetic process from serine	1.89E-02
159	GO:0010311: lateral root formation	2.09E-02
160	GO:0080167: response to karrikin	2.09E-02
161	GO:0048229: gametophyte development	2.10E-02
162	GO:0010015: root morphogenesis	2.10E-02
163	GO:0009773: photosynthetic electron transport in photosystem I	2.10E-02
164	GO:0009682: induced systemic resistance	2.10E-02
165	GO:0016024: CDP-diacylglycerol biosynthetic process	2.31E-02
166	GO:0010582: floral meristem determinacy	2.31E-02
167	GO:0016310: phosphorylation	2.38E-02
168	GO:0010628: positive regulation of gene expression	2.53E-02
169	GO:0009785: blue light signaling pathway	2.53E-02
170	GO:0006006: glucose metabolic process	2.53E-02
171	GO:0030036: actin cytoskeleton organization	2.53E-02
172	GO:0010075: regulation of meristem growth	2.53E-02
173	GO:0009725: response to hormone	2.53E-02
174	GO:0009934: regulation of meristem structural organization	2.76E-02
175	GO:0010207: photosystem II assembly	2.76E-02
176	GO:0010020: chloroplast fission	2.76E-02
177	GO:0090351: seedling development	2.99E-02
178	GO:0010030: positive regulation of seed germination	2.99E-02
179	GO:0007623: circadian rhythm	3.00E-02
180	GO:0009833: plant-type primary cell wall biogenesis	3.23E-02
181	GO:0006071: glycerol metabolic process	3.23E-02
182	GO:0042546: cell wall biogenesis	3.39E-02
183	GO:0030150: protein import into mitochondrial matrix	3.48E-02
184	GO:0051017: actin filament bundle assembly	3.48E-02
185	GO:0010187: negative regulation of seed germination	3.48E-02
186	GO:0019344: cysteine biosynthetic process	3.48E-02
187	GO:0009944: polarity specification of adaxial/abaxial axis	3.48E-02
188	GO:0007166: cell surface receptor signaling pathway	3.54E-02
189	GO:0008380: RNA splicing	3.73E-02
190	GO:0006825: copper ion transport	3.73E-02
191	GO:0006418: tRNA aminoacylation for protein translation	3.73E-02
192	GO:0006874: cellular calcium ion homeostasis	3.73E-02
193	GO:0006855: drug transmembrane transport	3.79E-02
194	GO:0016998: cell wall macromolecule catabolic process	3.99E-02
195	GO:0005975: carbohydrate metabolic process	4.08E-02
196	GO:0006730: one-carbon metabolic process	4.26E-02
197	GO:0031348: negative regulation of defense response	4.26E-02
198	GO:0009625: response to insect	4.53E-02
199	GO:0009693: ethylene biosynthetic process	4.53E-02
200	GO:0019722: calcium-mediated signaling	4.80E-02
201	GO:0010214: seed coat development	4.80E-02
202	GO:0010091: trichome branching	4.80E-02
203	GO:0006284: base-excision repair	4.80E-02
204	GO:0006417: regulation of translation	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0015276: ligand-gated ion channel activity	0.00E+00
2	GO:0004056: argininosuccinate lyase activity	0.00E+00
3	GO:0019136: deoxynucleoside kinase activity	0.00E+00
4	GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity	0.00E+00
5	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
6	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
7	GO:0015136: sialic acid transmembrane transporter activity	0.00E+00
8	GO:0009672: auxin:proton symporter activity	1.15E-04
9	GO:0004805: trehalose-phosphatase activity	1.46E-04
10	GO:0010329: auxin efflux transmembrane transporter activity	2.65E-04
11	GO:0005262: calcium channel activity	2.65E-04
12	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.99E-04
13	GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity	6.22E-04
14	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	6.22E-04
15	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	6.22E-04
16	GO:0010313: phytochrome binding	6.22E-04
17	GO:0004830: tryptophan-tRNA ligase activity	6.22E-04
18	GO:0050139: nicotinate-N-glucosyltransferase activity	6.22E-04
19	GO:0051777: ent-kaurenoate oxidase activity	6.22E-04
20	GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	6.22E-04
21	GO:0008066: glutamate receptor activity	6.22E-04
22	GO:0005290: L-histidine transmembrane transporter activity	6.22E-04
23	GO:0004008: copper-exporting ATPase activity	6.22E-04
24	GO:0003727: single-stranded RNA binding	8.75E-04
25	GO:0015929: hexosaminidase activity	1.34E-03
26	GO:0004563: beta-N-acetylhexosaminidase activity	1.34E-03
27	GO:0050017: L-3-cyanoalanine synthase activity	1.34E-03
28	GO:0043425: bHLH transcription factor binding	1.34E-03
29	GO:0102083: 7,8-dihydromonapterin aldolase activity	1.34E-03
30	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.34E-03
31	GO:0008805: carbon-monoxide oxygenase activity	1.34E-03
32	GO:0004150: dihydroneopterin aldolase activity	1.34E-03
33	GO:0000064: L-ornithine transmembrane transporter activity	1.34E-03
34	GO:0000156: phosphorelay response regulator activity	1.82E-03
35	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.05E-03
36	GO:0004557: alpha-galactosidase activity	2.20E-03
37	GO:0052692: raffinose alpha-galactosidase activity	2.20E-03
38	GO:0070180: large ribosomal subunit rRNA binding	2.20E-03
39	GO:0070330: aromatase activity	2.20E-03
40	GO:0045548: phenylalanine ammonia-lyase activity	2.20E-03
41	GO:0015181: arginine transmembrane transporter activity	3.20E-03
42	GO:0017172: cysteine dioxygenase activity	3.20E-03
43	GO:0035197: siRNA binding	3.20E-03
44	GO:0015189: L-lysine transmembrane transporter activity	3.20E-03
45	GO:0005215: transporter activity	3.28E-03
46	GO:0031418: L-ascorbic acid binding	4.21E-03
47	GO:0019199: transmembrane receptor protein kinase activity	4.32E-03
48	GO:0005253: anion channel activity	4.32E-03
49	GO:0046556: alpha-L-arabinofuranosidase activity	4.32E-03
50	GO:0004845: uracil phosphoribosyltransferase activity	4.32E-03
51	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.32E-03
52	GO:0043015: gamma-tubulin binding	4.32E-03
53	GO:0016829: lyase activity	5.37E-03
54	GO:0018685: alkane 1-monooxygenase activity	5.55E-03
55	GO:0008725: DNA-3-methyladenine glycosylase activity	5.55E-03
56	GO:0004372: glycine hydroxymethyltransferase activity	5.55E-03
57	GO:0016301: kinase activity	6.29E-03
58	GO:0008519: ammonium transmembrane transporter activity	6.88E-03
59	GO:0005247: voltage-gated chloride channel activity	6.88E-03
60	GO:2001070: starch binding	6.88E-03
61	GO:0004605: phosphatidate cytidylyltransferase activity	6.88E-03
62	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.88E-03
63	GO:0005351: sugar:proton symporter activity	7.52E-03
64	GO:0004656: procollagen-proline 4-dioxygenase activity	8.32E-03
65	GO:0004124: cysteine synthase activity	8.32E-03
66	GO:0008195: phosphatidate phosphatase activity	8.32E-03
67	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	8.32E-03
68	GO:0004849: uridine kinase activity	8.32E-03
69	GO:0001085: RNA polymerase II transcription factor binding	8.43E-03
70	GO:0005338: nucleotide-sugar transmembrane transporter activity	9.86E-03
71	GO:0003872: 6-phosphofructokinase activity	9.86E-03
72	GO:0019899: enzyme binding	9.86E-03
73	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.04E-02
74	GO:0016759: cellulose synthase activity	1.27E-02
75	GO:0008173: RNA methyltransferase activity	1.32E-02
76	GO:0005375: copper ion transmembrane transporter activity	1.32E-02
77	GO:0004650: polygalacturonase activity	1.34E-02
78	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.50E-02
79	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.50E-02
80	GO:0004674: protein serine/threonine kinase activity	1.62E-02
81	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.79E-02
82	GO:0015238: drug transmembrane transporter activity	2.09E-02
83	GO:0008327: methyl-CpG binding	2.10E-02
84	GO:0004252: serine-type endopeptidase activity	2.28E-02
85	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.30E-02
86	GO:0004521: endoribonuclease activity	2.31E-02
87	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.31E-02
88	GO:0015144: carbohydrate transmembrane transporter activity	2.51E-02
89	GO:0004022: alcohol dehydrogenase (NAD) activity	2.53E-02
90	GO:0015266: protein channel activity	2.53E-02
91	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.53E-02
92	GO:0004089: carbonate dehydratase activity	2.53E-02
93	GO:0031072: heat shock protein binding	2.53E-02
94	GO:0009982: pseudouridine synthase activity	2.53E-02
95	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.75E-02
96	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.76E-02
97	GO:0008083: growth factor activity	2.76E-02
98	GO:0042393: histone binding	2.88E-02
99	GO:0004871: signal transducer activity	2.92E-02
100	GO:0004970: ionotropic glutamate receptor activity	2.99E-02
101	GO:0005217: intracellular ligand-gated ion channel activity	2.99E-02
102	GO:0043621: protein self-association	3.52E-02
103	GO:0005345: purine nucleobase transmembrane transporter activity	3.73E-02
104	GO:0033612: receptor serine/threonine kinase binding	3.99E-02
105	GO:0035251: UDP-glucosyltransferase activity	3.99E-02
106	GO:0004707: MAP kinase activity	3.99E-02
107	GO:0004176: ATP-dependent peptidase activity	3.99E-02
108	GO:0016760: cellulose synthase (UDP-forming) activity	4.53E-02
109	GO:0022891: substrate-specific transmembrane transporter activity	4.53E-02
110	GO:0030570: pectate lyase activity	4.53E-02
111	GO:0003690: double-stranded DNA binding	4.53E-02
112	GO:0008514: organic anion transmembrane transporter activity	4.80E-02
113	GO:0008168: methyltransferase activity	4.89E-02