GO Enrichment Analysis of Co-expressed Genes with
AT2G02740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
| 2 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 3 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 4 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 5 | GO:0009658: chloroplast organization | 3.26E-06 |
| 6 | GO:0042793: transcription from plastid promoter | 3.11E-05 |
| 7 | GO:0042255: ribosome assembly | 7.70E-05 |
| 8 | GO:0006353: DNA-templated transcription, termination | 7.70E-05 |
| 9 | GO:0034757: negative regulation of iron ion transport | 1.22E-04 |
| 10 | GO:0080112: seed growth | 1.22E-04 |
| 11 | GO:1903866: palisade mesophyll development | 1.22E-04 |
| 12 | GO:1905039: carboxylic acid transmembrane transport | 1.22E-04 |
| 13 | GO:1905200: gibberellic acid transmembrane transport | 1.22E-04 |
| 14 | GO:0090063: positive regulation of microtubule nucleation | 1.22E-04 |
| 15 | GO:1900865: chloroplast RNA modification | 1.44E-04 |
| 16 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.82E-04 |
| 17 | GO:1901529: positive regulation of anion channel activity | 2.82E-04 |
| 18 | GO:0033566: gamma-tubulin complex localization | 2.82E-04 |
| 19 | GO:0010569: regulation of double-strand break repair via homologous recombination | 2.82E-04 |
| 20 | GO:0010271: regulation of chlorophyll catabolic process | 2.82E-04 |
| 21 | GO:0009662: etioplast organization | 2.82E-04 |
| 22 | GO:0080009: mRNA methylation | 2.82E-04 |
| 23 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 4.65E-04 |
| 24 | GO:0080117: secondary growth | 4.65E-04 |
| 25 | GO:0090391: granum assembly | 4.65E-04 |
| 26 | GO:0006518: peptide metabolic process | 4.65E-04 |
| 27 | GO:0006364: rRNA processing | 4.76E-04 |
| 28 | GO:0010371: regulation of gibberellin biosynthetic process | 6.66E-04 |
| 29 | GO:0010239: chloroplast mRNA processing | 6.66E-04 |
| 30 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 6.66E-04 |
| 31 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 6.66E-04 |
| 32 | GO:0006479: protein methylation | 8.84E-04 |
| 33 | GO:1900864: mitochondrial RNA modification | 8.84E-04 |
| 34 | GO:0080156: mitochondrial mRNA modification | 9.99E-04 |
| 35 | GO:0048497: maintenance of floral organ identity | 1.12E-03 |
| 36 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.37E-03 |
| 37 | GO:0016554: cytidine to uridine editing | 1.37E-03 |
| 38 | GO:0009913: epidermal cell differentiation | 1.37E-03 |
| 39 | GO:0048831: regulation of shoot system development | 1.37E-03 |
| 40 | GO:0009643: photosynthetic acclimation | 1.37E-03 |
| 41 | GO:0009451: RNA modification | 1.50E-03 |
| 42 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.64E-03 |
| 43 | GO:0009955: adaxial/abaxial pattern specification | 1.64E-03 |
| 44 | GO:1901259: chloroplast rRNA processing | 1.64E-03 |
| 45 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.64E-03 |
| 46 | GO:0048509: regulation of meristem development | 1.64E-03 |
| 47 | GO:0008380: RNA splicing | 1.82E-03 |
| 48 | GO:0006401: RNA catabolic process | 1.92E-03 |
| 49 | GO:0006955: immune response | 1.92E-03 |
| 50 | GO:0052543: callose deposition in cell wall | 2.22E-03 |
| 51 | GO:0009642: response to light intensity | 2.22E-03 |
| 52 | GO:0009827: plant-type cell wall modification | 2.54E-03 |
| 53 | GO:0019430: removal of superoxide radicals | 2.54E-03 |
| 54 | GO:0032544: plastid translation | 2.54E-03 |
| 55 | GO:0098656: anion transmembrane transport | 2.87E-03 |
| 56 | GO:0006535: cysteine biosynthetic process from serine | 3.57E-03 |
| 57 | GO:0048765: root hair cell differentiation | 3.94E-03 |
| 58 | GO:0015770: sucrose transport | 3.94E-03 |
| 59 | GO:0009750: response to fructose | 3.94E-03 |
| 60 | GO:0048229: gametophyte development | 3.94E-03 |
| 61 | GO:0045037: protein import into chloroplast stroma | 4.32E-03 |
| 62 | GO:0010102: lateral root morphogenesis | 4.71E-03 |
| 63 | GO:0010020: chloroplast fission | 5.12E-03 |
| 64 | GO:0080188: RNA-directed DNA methylation | 5.54E-03 |
| 65 | GO:0009901: anther dehiscence | 5.54E-03 |
| 66 | GO:0019344: cysteine biosynthetic process | 6.42E-03 |
| 67 | GO:0000027: ribosomal large subunit assembly | 6.42E-03 |
| 68 | GO:0010431: seed maturation | 7.34E-03 |
| 69 | GO:0016998: cell wall macromolecule catabolic process | 7.34E-03 |
| 70 | GO:0071215: cellular response to abscisic acid stimulus | 8.30E-03 |
| 71 | GO:0070417: cellular response to cold | 9.31E-03 |
| 72 | GO:0040008: regulation of growth | 9.41E-03 |
| 73 | GO:0010087: phloem or xylem histogenesis | 9.83E-03 |
| 74 | GO:0042335: cuticle development | 9.83E-03 |
| 75 | GO:0010501: RNA secondary structure unwinding | 9.83E-03 |
| 76 | GO:0045490: pectin catabolic process | 9.86E-03 |
| 77 | GO:0007018: microtubule-based movement | 1.09E-02 |
| 78 | GO:0048825: cotyledon development | 1.15E-02 |
| 79 | GO:0009749: response to glucose | 1.15E-02 |
| 80 | GO:0032502: developmental process | 1.26E-02 |
| 81 | GO:0010027: thylakoid membrane organization | 1.56E-02 |
| 82 | GO:0010029: regulation of seed germination | 1.62E-02 |
| 83 | GO:0000160: phosphorelay signal transduction system | 1.95E-02 |
| 84 | GO:0030001: metal ion transport | 2.44E-02 |
| 85 | GO:0009744: response to sucrose | 2.67E-02 |
| 86 | GO:0008283: cell proliferation | 2.67E-02 |
| 87 | GO:0009636: response to toxic substance | 2.90E-02 |
| 88 | GO:0048364: root development | 2.93E-02 |
| 89 | GO:0009736: cytokinin-activated signaling pathway | 3.30E-02 |
| 90 | GO:0009909: regulation of flower development | 3.55E-02 |
| 91 | GO:0048367: shoot system development | 3.80E-02 |
| 92 | GO:0009734: auxin-activated signaling pathway | 3.94E-02 |
| 93 | GO:0016569: covalent chromatin modification | 4.06E-02 |
| 94 | GO:0009740: gibberellic acid mediated signaling pathway | 4.06E-02 |
| 95 | GO:0006396: RNA processing | 4.33E-02 |
| 96 | GO:0006355: regulation of transcription, DNA-templated | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 2 | GO:0019843: rRNA binding | 1.13E-04 |
| 3 | GO:0004016: adenylate cyclase activity | 1.22E-04 |
| 4 | GO:1905201: gibberellin transmembrane transporter activity | 1.22E-04 |
| 5 | GO:0042834: peptidoglycan binding | 1.22E-04 |
| 6 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.22E-04 |
| 7 | GO:0016274: protein-arginine N-methyltransferase activity | 1.22E-04 |
| 8 | GO:0004519: endonuclease activity | 1.98E-04 |
| 9 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 2.82E-04 |
| 10 | GO:0009884: cytokinin receptor activity | 2.82E-04 |
| 11 | GO:0003723: RNA binding | 3.20E-04 |
| 12 | GO:0005034: osmosensor activity | 4.65E-04 |
| 13 | GO:0070180: large ribosomal subunit rRNA binding | 4.65E-04 |
| 14 | GO:0030570: pectate lyase activity | 6.02E-04 |
| 15 | GO:0003727: single-stranded RNA binding | 6.53E-04 |
| 16 | GO:0004784: superoxide dismutase activity | 1.37E-03 |
| 17 | GO:0019900: kinase binding | 1.64E-03 |
| 18 | GO:0004124: cysteine synthase activity | 1.64E-03 |
| 19 | GO:0004222: metalloendopeptidase activity | 2.03E-03 |
| 20 | GO:0008173: RNA methyltransferase activity | 2.54E-03 |
| 21 | GO:0004673: protein histidine kinase activity | 3.57E-03 |
| 22 | GO:0008515: sucrose transmembrane transporter activity | 3.94E-03 |
| 23 | GO:0003690: double-stranded DNA binding | 4.16E-03 |
| 24 | GO:0000155: phosphorelay sensor kinase activity | 4.71E-03 |
| 25 | GO:0009982: pseudouridine synthase activity | 4.71E-03 |
| 26 | GO:0000175: 3'-5'-exoribonuclease activity | 4.71E-03 |
| 27 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.71E-03 |
| 28 | GO:0051119: sugar transmembrane transporter activity | 5.54E-03 |
| 29 | GO:0003779: actin binding | 5.54E-03 |
| 30 | GO:0003735: structural constituent of ribosome | 5.68E-03 |
| 31 | GO:0043424: protein histidine kinase binding | 6.87E-03 |
| 32 | GO:0004540: ribonuclease activity | 7.34E-03 |
| 33 | GO:0004176: ATP-dependent peptidase activity | 7.34E-03 |
| 34 | GO:0008514: organic anion transmembrane transporter activity | 8.80E-03 |
| 35 | GO:0016887: ATPase activity | 9.49E-03 |
| 36 | GO:0003713: transcription coactivator activity | 1.04E-02 |
| 37 | GO:0008237: metallopeptidase activity | 1.44E-02 |
| 38 | GO:0008168: methyltransferase activity | 1.47E-02 |
| 39 | GO:0008375: acetylglucosaminyltransferase activity | 1.69E-02 |
| 40 | GO:0004004: ATP-dependent RNA helicase activity | 1.75E-02 |
| 41 | GO:0008236: serine-type peptidase activity | 1.82E-02 |
| 42 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.44E-02 |
| 43 | GO:0004185: serine-type carboxypeptidase activity | 2.67E-02 |
| 44 | GO:0003777: microtubule motor activity | 3.55E-02 |
| 45 | GO:0008289: lipid binding | 3.90E-02 |
| 46 | GO:0016874: ligase activity | 4.06E-02 |
| 47 | GO:0022857: transmembrane transporter activity | 4.06E-02 |
| 48 | GO:0004672: protein kinase activity | 4.41E-02 |
| 49 | GO:0008026: ATP-dependent helicase activity | 4.42E-02 |