co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901698: response to nitrogen compound	0.00E+00
2	GO:0009606: tropism	0.00E+00
3	GO:0007638: mechanosensory behavior	0.00E+00
4	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
5	GO:0035884: arabinan biosynthetic process	0.00E+00
6	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
7	GO:0097164: ammonium ion metabolic process	0.00E+00
8	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
9	GO:0045184: establishment of protein localization	0.00E+00
10	GO:0031222: arabinan catabolic process	0.00E+00
11	GO:0046719: regulation by virus of viral protein levels in host cell	0.00E+00
12	GO:0046620: regulation of organ growth	8.68E-09
13	GO:0009734: auxin-activated signaling pathway	8.90E-08
14	GO:0009926: auxin polar transport	1.40E-06
15	GO:0009733: response to auxin	5.29E-06
16	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.33E-05
17	GO:0010569: regulation of double-strand break repair via homologous recombination	1.47E-05
18	GO:0007389: pattern specification process	5.61E-05
19	GO:2000038: regulation of stomatal complex development	1.77E-04
20	GO:0010252: auxin homeostasis	2.42E-04
21	GO:0009416: response to light stimulus	2.97E-04
22	GO:1901537: positive regulation of DNA demethylation	5.80E-04
23	GO:0090558: plant epidermis development	5.80E-04
24	GO:0010480: microsporocyte differentiation	5.80E-04
25	GO:1903866: palisade mesophyll development	5.80E-04
26	GO:0035987: endodermal cell differentiation	5.80E-04
27	GO:0043609: regulation of carbon utilization	5.80E-04
28	GO:0006436: tryptophanyl-tRNA aminoacylation	5.80E-04
29	GO:0000066: mitochondrial ornithine transport	5.80E-04
30	GO:0034757: negative regulation of iron ion transport	5.80E-04
31	GO:0042659: regulation of cell fate specification	5.80E-04
32	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.42E-04
33	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.25E-03
34	GO:0070981: L-asparagine biosynthetic process	1.25E-03
35	GO:0010271: regulation of chlorophyll catabolic process	1.25E-03
36	GO:0010434: bract formation	1.25E-03
37	GO:0018026: peptidyl-lysine monomethylation	1.25E-03
38	GO:0071497: cellular response to freezing	1.25E-03
39	GO:1900033: negative regulation of trichome patterning	1.25E-03
40	GO:0048439: flower morphogenesis	1.25E-03
41	GO:1904143: positive regulation of carotenoid biosynthetic process	1.25E-03
42	GO:0080009: mRNA methylation	1.25E-03
43	GO:0006529: asparagine biosynthetic process	1.25E-03
44	GO:2000123: positive regulation of stomatal complex development	1.25E-03
45	GO:0010254: nectary development	1.25E-03
46	GO:0071555: cell wall organization	1.93E-03
47	GO:0006000: fructose metabolic process	2.05E-03
48	GO:0090391: granum assembly	2.05E-03
49	GO:0071705: nitrogen compound transport	2.05E-03
50	GO:0001578: microtubule bundle formation	2.05E-03
51	GO:0006760: folic acid-containing compound metabolic process	2.05E-03
52	GO:0009954: proximal/distal pattern formation	2.05E-03
53	GO:0090708: specification of plant organ axis polarity	2.05E-03
54	GO:0080117: secondary growth	2.05E-03
55	GO:0010582: floral meristem determinacy	2.12E-03
56	GO:0010027: thylakoid membrane organization	2.16E-03
57	GO:0009767: photosynthetic electron transport chain	2.41E-03
58	GO:2000012: regulation of auxin polar transport	2.41E-03
59	GO:0046739: transport of virus in multicellular host	2.98E-03
60	GO:2000904: regulation of starch metabolic process	2.98E-03
61	GO:0051289: protein homotetramerization	2.98E-03
62	GO:1902290: positive regulation of defense response to oomycetes	2.98E-03
63	GO:1902476: chloride transmembrane transport	2.98E-03
64	GO:0051513: regulation of monopolar cell growth	2.98E-03
65	GO:0007231: osmosensory signaling pathway	2.98E-03
66	GO:0051639: actin filament network formation	2.98E-03
67	GO:0010239: chloroplast mRNA processing	2.98E-03
68	GO:0044211: CTP salvage	2.98E-03
69	GO:0009800: cinnamic acid biosynthetic process	2.98E-03
70	GO:0000160: phosphorelay signal transduction system	3.24E-03
71	GO:0009944: polarity specification of adaxial/abaxial axis	3.79E-03
72	GO:0046656: folic acid biosynthetic process	4.02E-03
73	GO:0044205: 'de novo' UMP biosynthetic process	4.02E-03
74	GO:0044206: UMP salvage	4.02E-03
75	GO:1901141: regulation of lignin biosynthetic process	4.02E-03
76	GO:0006479: protein methylation	4.02E-03
77	GO:0048629: trichome patterning	4.02E-03
78	GO:0051764: actin crosslink formation	4.02E-03
79	GO:0051322: anaphase	4.02E-03
80	GO:0071249: cellular response to nitrate	4.02E-03
81	GO:0030104: water homeostasis	4.02E-03
82	GO:0022622: root system development	4.02E-03
83	GO:0033500: carbohydrate homeostasis	4.02E-03
84	GO:0006825: copper ion transport	4.19E-03
85	GO:0016998: cell wall macromolecule catabolic process	4.60E-03
86	GO:1902183: regulation of shoot apical meristem development	5.16E-03
87	GO:0016123: xanthophyll biosynthetic process	5.16E-03
88	GO:0010438: cellular response to sulfur starvation	5.16E-03
89	GO:0010158: abaxial cell fate specification	5.16E-03
90	GO:0032876: negative regulation of DNA endoreduplication	5.16E-03
91	GO:0030308: negative regulation of cell growth	5.16E-03
92	GO:0080110: sporopollenin biosynthetic process	5.16E-03
93	GO:0010375: stomatal complex patterning	5.16E-03
94	GO:0010082: regulation of root meristem growth	5.51E-03
95	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.51E-03
96	GO:0005975: carbohydrate metabolic process	5.62E-03
97	GO:0006468: protein phosphorylation	5.82E-03
98	GO:0040008: regulation of growth	6.18E-03
99	GO:0042793: transcription from plastid promoter	6.40E-03
100	GO:0048831: regulation of shoot system development	6.40E-03
101	GO:0010315: auxin efflux	6.40E-03
102	GO:0006559: L-phenylalanine catabolic process	6.40E-03
103	GO:0006206: pyrimidine nucleobase metabolic process	6.40E-03
104	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.40E-03
105	GO:0010405: arabinogalactan protein metabolic process	6.40E-03
106	GO:0006655: phosphatidylglycerol biosynthetic process	6.40E-03
107	GO:0006796: phosphate-containing compound metabolic process	6.40E-03
108	GO:0030154: cell differentiation	6.45E-03
109	GO:0009741: response to brassinosteroid	7.59E-03
110	GO:0009958: positive gravitropism	7.59E-03
111	GO:0010067: procambium histogenesis	7.73E-03
112	GO:0009942: longitudinal axis specification	7.73E-03
113	GO:0048509: regulation of meristem development	7.73E-03
114	GO:0046654: tetrahydrofolate biosynthetic process	7.73E-03
115	GO:0030488: tRNA methylation	7.73E-03
116	GO:1901259: chloroplast rRNA processing	7.73E-03
117	GO:2000037: regulation of stomatal complex patterning	7.73E-03
118	GO:2000067: regulation of root morphogenesis	7.73E-03
119	GO:0071470: cellular response to osmotic stress	7.73E-03
120	GO:0009739: response to gibberellin	7.88E-03
121	GO:0009646: response to absence of light	8.17E-03
122	GO:0009736: cytokinin-activated signaling pathway	8.36E-03
123	GO:0048437: floral organ development	9.15E-03
124	GO:0030307: positive regulation of cell growth	9.15E-03
125	GO:0010103: stomatal complex morphogenesis	9.15E-03
126	GO:0032880: regulation of protein localization	9.15E-03
127	GO:0009610: response to symbiotic fungus	9.15E-03
128	GO:0006955: immune response	9.15E-03
129	GO:0007050: cell cycle arrest	9.15E-03
130	GO:0006821: chloride transport	9.15E-03
131	GO:0010050: vegetative phase change	9.15E-03
132	GO:0080156: mitochondrial mRNA modification	9.39E-03
133	GO:0009751: response to salicylic acid	9.75E-03
134	GO:0032502: developmental process	1.00E-02
135	GO:0010583: response to cyclopentenone	1.00E-02
136	GO:0009850: auxin metabolic process	1.07E-02
137	GO:0030162: regulation of proteolysis	1.07E-02
138	GO:0042255: ribosome assembly	1.07E-02
139	GO:0048766: root hair initiation	1.07E-02
140	GO:0055075: potassium ion homeostasis	1.07E-02
141	GO:0000105: histidine biosynthetic process	1.07E-02
142	GO:0010439: regulation of glucosinolate biosynthetic process	1.07E-02
143	GO:0001522: pseudouridine synthesis	1.07E-02
144	GO:0009828: plant-type cell wall loosening	1.14E-02
145	GO:0007186: G-protein coupled receptor signaling pathway	1.23E-02
146	GO:0010497: plasmodesmata-mediated intercellular transport	1.23E-02
147	GO:0006526: arginine biosynthetic process	1.23E-02
148	GO:0006002: fructose 6-phosphate metabolic process	1.23E-02
149	GO:0009827: plant-type cell wall modification	1.23E-02
150	GO:0009658: chloroplast organization	1.29E-02
151	GO:2000024: regulation of leaf development	1.39E-02
152	GO:0000373: Group II intron splicing	1.39E-02
153	GO:0000902: cell morphogenesis	1.39E-02
154	GO:0009051: pentose-phosphate shunt, oxidative branch	1.39E-02
155	GO:1900865: chloroplast RNA modification	1.57E-02
156	GO:0031425: chloroplast RNA processing	1.57E-02
157	GO:1900426: positive regulation of defense response to bacterium	1.57E-02
158	GO:0009638: phototropism	1.57E-02
159	GO:2000280: regulation of root development	1.57E-02
160	GO:0006349: regulation of gene expression by genetic imprinting	1.57E-02
161	GO:0010411: xyloglucan metabolic process	1.61E-02
162	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.62E-02
163	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.75E-02
164	GO:0006949: syncytium formation	1.75E-02
165	GO:0031627: telomeric loop formation	1.75E-02
166	GO:0010048: vernalization response	1.75E-02
167	GO:0080167: response to karrikin	1.78E-02
168	GO:0048481: plant ovule development	1.79E-02
169	GO:0009682: induced systemic resistance	1.94E-02
170	GO:0048229: gametophyte development	1.94E-02
171	GO:0010015: root morphogenesis	1.94E-02
172	GO:0006816: calcium ion transport	1.94E-02
173	GO:0015706: nitrate transport	2.14E-02
174	GO:0016024: CDP-diacylglycerol biosynthetic process	2.14E-02
175	GO:0008361: regulation of cell size	2.14E-02
176	GO:0009785: blue light signaling pathway	2.34E-02
177	GO:0006006: glucose metabolic process	2.34E-02
178	GO:0009691: cytokinin biosynthetic process	2.34E-02
179	GO:0010075: regulation of meristem growth	2.34E-02
180	GO:0006541: glutamine metabolic process	2.56E-02
181	GO:0010223: secondary shoot formation	2.56E-02
182	GO:0009934: regulation of meristem structural organization	2.56E-02
183	GO:0010143: cutin biosynthetic process	2.56E-02
184	GO:0010207: photosystem II assembly	2.56E-02
185	GO:0006839: mitochondrial transport	2.59E-02
186	GO:0030001: metal ion transport	2.59E-02
187	GO:0009451: RNA modification	2.70E-02
188	GO:0080188: RNA-directed DNA methylation	2.77E-02
189	GO:0010167: response to nitrate	2.77E-02
190	GO:0090351: seedling development	2.77E-02
191	GO:0070588: calcium ion transmembrane transport	2.77E-02
192	GO:0010114: response to red light	2.93E-02
193	GO:0006071: glycerol metabolic process	3.00E-02
194	GO:0006833: water transport	3.00E-02
195	GO:0042546: cell wall biogenesis	3.05E-02
196	GO:0080147: root hair cell development	3.23E-02
197	GO:0051017: actin filament bundle assembly	3.23E-02
198	GO:0005992: trehalose biosynthetic process	3.23E-02
199	GO:0008380: RNA splicing	3.28E-02
200	GO:0051302: regulation of cell division	3.46E-02
201	GO:0006418: tRNA aminoacylation for protein translation	3.46E-02
202	GO:0006874: cellular calcium ion homeostasis	3.46E-02
203	GO:0009664: plant-type cell wall organization	3.67E-02
204	GO:0006306: DNA methylation	3.70E-02
205	GO:0019915: lipid storage	3.70E-02
206	GO:0031348: negative regulation of defense response	3.95E-02
207	GO:0019748: secondary metabolic process	3.95E-02
208	GO:0016310: phosphorylation	4.04E-02
209	GO:0071215: cellular response to abscisic acid stimulus	4.20E-02
210	GO:0009686: gibberellin biosynthetic process	4.20E-02
211	GO:0001944: vasculature development	4.20E-02
212	GO:0009625: response to insect	4.20E-02
213	GO:0010227: floral organ abscission	4.20E-02
214	GO:0009826: unidimensional cell growth	4.31E-02
215	GO:0006284: base-excision repair	4.46E-02
216	GO:0010089: xylem development	4.46E-02
217	GO:0010584: pollen exine formation	4.46E-02
218	GO:0070417: cellular response to cold	4.72E-02
219	GO:0008284: positive regulation of cell proliferation	4.72E-02
220	GO:0048316: seed development	4.80E-02
221	GO:0000226: microtubule cytoskeleton organization	4.98E-02
222	GO:0008033: tRNA processing	4.98E-02
223	GO:0010087: phloem or xylem histogenesis	4.98E-02
224	GO:0048653: anther development	4.98E-02
225	GO:0042631: cellular response to water deprivation	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
2	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
3	GO:0070009: serine-type aminopeptidase activity	0.00E+00
4	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
5	GO:0009672: auxin:proton symporter activity	9.88E-05
6	GO:0001872: (1->3)-beta-D-glucan binding	1.03E-04
7	GO:0004674: protein serine/threonine kinase activity	2.16E-04
8	GO:0010329: auxin efflux transmembrane transporter activity	2.30E-04
9	GO:0004650: polygalacturonase activity	5.16E-04
10	GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	5.80E-04
11	GO:0016274: protein-arginine N-methyltransferase activity	5.80E-04
12	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	5.80E-04
13	GO:0005290: L-histidine transmembrane transporter activity	5.80E-04
14	GO:0004008: copper-exporting ATPase activity	5.80E-04
15	GO:0003867: 4-aminobutyrate transaminase activity	5.80E-04
16	GO:0004071: aspartate-ammonia ligase activity	5.80E-04
17	GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity	5.80E-04
18	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	5.80E-04
19	GO:0052381: tRNA dimethylallyltransferase activity	5.80E-04
20	GO:0004830: tryptophan-tRNA ligase activity	5.80E-04
21	GO:0004016: adenylate cyclase activity	5.80E-04
22	GO:0004400: histidinol-phosphate transaminase activity	5.80E-04
23	GO:0042834: peptidoglycan binding	5.80E-04
24	GO:0003727: single-stranded RNA binding	7.69E-04
25	GO:0008805: carbon-monoxide oxygenase activity	1.25E-03
26	GO:0004150: dihydroneopterin aldolase activity	1.25E-03
27	GO:0000064: L-ornithine transmembrane transporter activity	1.25E-03
28	GO:0015929: hexosaminidase activity	1.25E-03
29	GO:0004563: beta-N-acetylhexosaminidase activity	1.25E-03
30	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.25E-03
31	GO:0009884: cytokinin receptor activity	1.25E-03
32	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	1.25E-03
33	GO:0102083: 7,8-dihydromonapterin aldolase activity	1.25E-03
34	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.25E-03
35	GO:0045548: phenylalanine ammonia-lyase activity	2.05E-03
36	GO:0032549: ribonucleoside binding	2.05E-03
37	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	2.05E-03
38	GO:0005034: osmosensor activity	2.05E-03
39	GO:0016707: gibberellin 3-beta-dioxygenase activity	2.05E-03
40	GO:0052722: fatty acid in-chain hydroxylase activity	2.05E-03
41	GO:0017150: tRNA dihydrouridine synthase activity	2.05E-03
42	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.73E-03
43	GO:0015181: arginine transmembrane transporter activity	2.98E-03
44	GO:0015189: L-lysine transmembrane transporter activity	2.98E-03
45	GO:0005253: anion channel activity	4.02E-03
46	GO:0004930: G-protein coupled receptor activity	4.02E-03
47	GO:0046556: alpha-L-arabinofuranosidase activity	4.02E-03
48	GO:0016279: protein-lysine N-methyltransferase activity	4.02E-03
49	GO:0004845: uracil phosphoribosyltransferase activity	4.02E-03
50	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.02E-03
51	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.12E-03
52	GO:0008725: DNA-3-methyladenine glycosylase activity	5.16E-03
53	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	5.59E-03
54	GO:0016208: AMP binding	6.40E-03
55	GO:0005247: voltage-gated chloride channel activity	6.40E-03
56	GO:2001070: starch binding	6.40E-03
57	GO:0004605: phosphatidate cytidylyltransferase activity	6.40E-03
58	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.40E-03
59	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	6.93E-03
60	GO:0016301: kinase activity	7.48E-03
61	GO:0004849: uridine kinase activity	7.73E-03
62	GO:0016832: aldehyde-lyase activity	7.73E-03
63	GO:0019900: kinase binding	7.73E-03
64	GO:0008195: phosphatidate phosphatase activity	7.73E-03
65	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	7.73E-03
66	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	8.36E-03
67	GO:0004427: inorganic diphosphatase activity	9.15E-03
68	GO:0016762: xyloglucan:xyloglucosyl transferase activity	9.39E-03
69	GO:0000156: phosphorelay response regulator activity	1.07E-02
70	GO:0004519: endonuclease activity	1.16E-02
71	GO:0003723: RNA binding	1.20E-02
72	GO:0008173: RNA methyltransferase activity	1.23E-02
73	GO:0005375: copper ion transmembrane transporter activity	1.23E-02
74	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.39E-02
75	GO:0030247: polysaccharide binding	1.61E-02
76	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.61E-02
77	GO:0004673: protein histidine kinase activity	1.75E-02
78	GO:0004805: trehalose-phosphatase activity	1.75E-02
79	GO:0016829: lyase activity	1.93E-02
80	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.94E-02
81	GO:0001054: RNA polymerase I activity	1.94E-02
82	GO:0003691: double-stranded telomeric DNA binding	1.94E-02
83	GO:0015144: carbohydrate transmembrane transporter activity	2.20E-02
84	GO:0004022: alcohol dehydrogenase (NAD) activity	2.34E-02
85	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.34E-02
86	GO:0031072: heat shock protein binding	2.34E-02
87	GO:0000155: phosphorelay sensor kinase activity	2.34E-02
88	GO:0005262: calcium channel activity	2.34E-02
89	GO:0009982: pseudouridine synthase activity	2.34E-02
90	GO:0003725: double-stranded RNA binding	2.34E-02
91	GO:0004871: signal transducer activity	2.50E-02
92	GO:0005351: sugar:proton symporter activity	2.55E-02
93	GO:0008083: growth factor activity	2.56E-02
94	GO:0004970: ionotropic glutamate receptor activity	2.77E-02
95	GO:0005217: intracellular ligand-gated ion channel activity	2.77E-02
96	GO:0004672: protein kinase activity	3.09E-02
97	GO:0005524: ATP binding	3.14E-02
98	GO:0008134: transcription factor binding	3.23E-02
99	GO:0003677: DNA binding	3.27E-02
100	GO:0043424: protein histidine kinase binding	3.46E-02
101	GO:0005345: purine nucleobase transmembrane transporter activity	3.46E-02
102	GO:0004707: MAP kinase activity	3.70E-02
103	GO:0004176: ATP-dependent peptidase activity	3.70E-02
104	GO:0033612: receptor serine/threonine kinase binding	3.70E-02
105	GO:0008408: 3'-5' exonuclease activity	3.70E-02
106	GO:0035251: UDP-glucosyltransferase activity	3.70E-02
107	GO:0022891: substrate-specific transmembrane transporter activity	4.20E-02
108	GO:0003777: microtubule motor activity	4.36E-02
109	GO:0016788: hydrolase activity, acting on ester bonds	4.61E-02
110	GO:0018024: histone-lysine N-methyltransferase activity	4.72E-02
111	GO:0004812: aminoacyl-tRNA ligase activity	4.72E-02