Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G01755

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035884: arabinan biosynthetic process0.00E+00
2GO:0051958: methotrexate transport0.00E+00
3GO:0097164: ammonium ion metabolic process0.00E+00
4GO:0045184: establishment of protein localization0.00E+00
5GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
6GO:0006399: tRNA metabolic process0.00E+00
7GO:0015843: methylammonium transport0.00E+00
8GO:0031222: arabinan catabolic process0.00E+00
9GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
10GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
11GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
12GO:0090071: negative regulation of ribosome biogenesis0.00E+00
13GO:0009606: tropism0.00E+00
14GO:0044249: cellular biosynthetic process0.00E+00
15GO:1903224: regulation of endodermal cell differentiation0.00E+00
16GO:0009658: chloroplast organization3.75E-09
17GO:0046620: regulation of organ growth8.50E-09
18GO:0009734: auxin-activated signaling pathway9.42E-09
19GO:0042793: transcription from plastid promoter1.01E-07
20GO:0009733: response to auxin1.51E-07
21GO:0040008: regulation of growth6.52E-07
22GO:0009657: plastid organization1.29E-06
23GO:0009451: RNA modification8.93E-06
24GO:1901259: chloroplast rRNA processing1.73E-05
25GO:0009926: auxin polar transport1.88E-05
26GO:0000373: Group II intron splicing7.46E-05
27GO:0016556: mRNA modification1.02E-04
28GO:0010239: chloroplast mRNA processing1.02E-04
29GO:0032502: developmental process1.92E-04
30GO:0016123: xanthophyll biosynthetic process2.67E-04
31GO:0010020: chloroplast fission2.70E-04
32GO:0043247: telomere maintenance in response to DNA damage5.77E-04
33GO:0010063: positive regulation of trichoblast fate specification5.77E-04
34GO:0033044: regulation of chromosome organization5.77E-04
35GO:0010480: microsporocyte differentiation5.77E-04
36GO:0042371: vitamin K biosynthetic process5.77E-04
37GO:0035987: endodermal cell differentiation5.77E-04
38GO:0006436: tryptophanyl-tRNA aminoacylation5.77E-04
39GO:0010729: positive regulation of hydrogen peroxide biosynthetic process5.77E-04
40GO:0032204: regulation of telomere maintenance5.77E-04
41GO:0042659: regulation of cell fate specification5.77E-04
42GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process5.77E-04
43GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.77E-04
44GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic5.77E-04
45GO:0090558: plant epidermis development5.77E-04
46GO:0048437: floral organ development6.37E-04
47GO:0042255: ribosome assembly7.93E-04
48GO:0006353: DNA-templated transcription, termination7.93E-04
49GO:0007389: pattern specification process9.63E-04
50GO:0000902: cell morphogenesis1.15E-03
51GO:0018026: peptidyl-lysine monomethylation1.24E-03
52GO:0071497: cellular response to freezing1.24E-03
53GO:0009662: etioplast organization1.24E-03
54GO:0009220: pyrimidine ribonucleotide biosynthetic process1.24E-03
55GO:1904143: positive regulation of carotenoid biosynthetic process1.24E-03
56GO:0006529: asparagine biosynthetic process1.24E-03
57GO:0009875: pollen-pistil interaction1.24E-03
58GO:2000123: positive regulation of stomatal complex development1.24E-03
59GO:0010270: photosystem II oxygen evolving complex assembly1.24E-03
60GO:0060359: response to ammonium ion1.24E-03
61GO:0070981: L-asparagine biosynthetic process1.24E-03
62GO:1902326: positive regulation of chlorophyll biosynthetic process1.24E-03
63GO:0031425: chloroplast RNA processing1.36E-03
64GO:0010252: auxin homeostasis1.70E-03
65GO:0007275: multicellular organism development1.76E-03
66GO:0010015: root morphogenesis1.84E-03
67GO:0042780: tRNA 3'-end processing2.04E-03
68GO:0006760: folic acid-containing compound metabolic process2.04E-03
69GO:0043157: response to cation stress2.04E-03
70GO:0032504: multicellular organism reproduction2.04E-03
71GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic2.04E-03
72GO:0045910: negative regulation of DNA recombination2.04E-03
73GO:0090708: specification of plant organ axis polarity2.04E-03
74GO:0006954: inflammatory response2.04E-03
75GO:0010207: photosystem II assembly2.71E-03
76GO:2000904: regulation of starch metabolic process2.96E-03
77GO:0043572: plastid fission2.96E-03
78GO:2001141: regulation of RNA biosynthetic process2.96E-03
79GO:0007004: telomere maintenance via telomerase2.96E-03
80GO:1902476: chloride transmembrane transport2.96E-03
81GO:0010071: root meristem specification2.96E-03
82GO:0051513: regulation of monopolar cell growth2.96E-03
83GO:0010306: rhamnogalacturonan II biosynthetic process2.96E-03
84GO:0044211: CTP salvage2.96E-03
85GO:0015696: ammonium transport2.96E-03
86GO:0046739: transport of virus in multicellular host2.96E-03
87GO:0009416: response to light stimulus3.00E-03
88GO:0042254: ribosome biogenesis3.53E-03
89GO:0044205: 'de novo' UMP biosynthetic process4.00E-03
90GO:0044206: UMP salvage4.00E-03
91GO:1901141: regulation of lignin biosynthetic process4.00E-03
92GO:0030104: water homeostasis4.00E-03
93GO:0072488: ammonium transmembrane transport4.00E-03
94GO:2000038: regulation of stomatal complex development4.00E-03
95GO:0046656: folic acid biosynthetic process4.00E-03
96GO:0016998: cell wall macromolecule catabolic process4.57E-03
97GO:0009904: chloroplast accumulation movement5.13E-03
98GO:0010236: plastoquinone biosynthetic process5.13E-03
99GO:0048497: maintenance of floral organ identity5.13E-03
100GO:0006282: regulation of DNA repair5.13E-03
101GO:0009107: lipoate biosynthetic process5.13E-03
102GO:1902183: regulation of shoot apical meristem development5.13E-03
103GO:0010158: abaxial cell fate specification5.13E-03
104GO:0010375: stomatal complex patterning5.13E-03
105GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.29E-03
106GO:0010082: regulation of root meristem growth5.47E-03
107GO:0006206: pyrimidine nucleobase metabolic process6.36E-03
108GO:0018258: protein O-linked glycosylation via hydroxyproline6.36E-03
109GO:0009228: thiamine biosynthetic process6.36E-03
110GO:0050665: hydrogen peroxide biosynthetic process6.36E-03
111GO:0010405: arabinogalactan protein metabolic process6.36E-03
112GO:0010304: PSII associated light-harvesting complex II catabolic process6.36E-03
113GO:0009959: negative gravitropism6.36E-03
114GO:0009913: epidermal cell differentiation6.36E-03
115GO:0006655: phosphatidylglycerol biosynthetic process6.36E-03
116GO:0010315: auxin efflux6.36E-03
117GO:0008033: tRNA processing6.98E-03
118GO:0048868: pollen tube development7.53E-03
119GO:0009741: response to brassinosteroid7.53E-03
120GO:0017148: negative regulation of translation7.69E-03
121GO:0009942: longitudinal axis specification7.69E-03
122GO:0046654: tetrahydrofolate biosynthetic process7.69E-03
123GO:0009099: valine biosynthetic process7.69E-03
124GO:0009903: chloroplast avoidance movement7.69E-03
125GO:0030488: tRNA methylation7.69E-03
126GO:0009854: oxidative photosynthetic carbon pathway7.69E-03
127GO:0080086: stamen filament development7.69E-03
128GO:2000067: regulation of root morphogenesis7.69E-03
129GO:0009955: adaxial/abaxial pattern specification7.69E-03
130GO:0019509: L-methionine salvage from methylthioadenosine7.69E-03
131GO:0042372: phylloquinone biosynthetic process7.69E-03
132GO:0009082: branched-chain amino acid biosynthetic process7.69E-03
133GO:0009646: response to absence of light8.10E-03
134GO:0006400: tRNA modification9.10E-03
135GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process9.10E-03
136GO:0030307: positive regulation of cell growth9.10E-03
137GO:0010044: response to aluminum ion9.10E-03
138GO:0006955: immune response9.10E-03
139GO:0007050: cell cycle arrest9.10E-03
140GO:0009772: photosynthetic electron transport in photosystem II9.10E-03
141GO:0006821: chloride transport9.10E-03
142GO:0010050: vegetative phase change9.10E-03
143GO:0009630: gravitropism9.97E-03
144GO:0010583: response to cyclopentenone9.97E-03
145GO:0009704: de-etiolation1.06E-02
146GO:0048766: root hair initiation1.06E-02
147GO:0070413: trehalose metabolism in response to stress1.06E-02
148GO:0055075: potassium ion homeostasis1.06E-02
149GO:0048564: photosystem I assembly1.06E-02
150GO:0001522: pseudouridine synthesis1.06E-02
151GO:0009850: auxin metabolic process1.06E-02
152GO:0009828: plant-type cell wall loosening1.13E-02
153GO:0010497: plasmodesmata-mediated intercellular transport1.22E-02
154GO:0009097: isoleucine biosynthetic process1.22E-02
155GO:0006526: arginine biosynthetic process1.22E-02
156GO:0010204: defense response signaling pathway, resistance gene-independent1.22E-02
157GO:0006303: double-strand break repair via nonhomologous end joining1.22E-02
158GO:0071482: cellular response to light stimulus1.22E-02
159GO:0009827: plant-type cell wall modification1.22E-02
160GO:0009553: embryo sac development1.25E-02
161GO:0010027: thylakoid membrane organization1.36E-02
162GO:0006098: pentose-phosphate shunt1.39E-02
163GO:2000024: regulation of leaf development1.39E-02
164GO:0010332: response to gamma radiation1.39E-02
165GO:0009742: brassinosteroid mediated signaling pathway1.40E-02
166GO:0006974: cellular response to DNA damage stimulus1.52E-02
167GO:0009638: phototropism1.56E-02
168GO:0042761: very long-chain fatty acid biosynthetic process1.56E-02
169GO:2000280: regulation of root development1.56E-02
170GO:1900865: chloroplast RNA modification1.56E-02
171GO:0010411: xyloglucan metabolic process1.60E-02
172GO:0009641: shade avoidance1.74E-02
173GO:0006298: mismatch repair1.74E-02
174GO:0006259: DNA metabolic process1.74E-02
175GO:0006535: cysteine biosynthetic process from serine1.74E-02
176GO:0080167: response to karrikin1.76E-02
177GO:0048481: plant ovule development1.77E-02
178GO:0006352: DNA-templated transcription, initiation1.93E-02
179GO:0048229: gametophyte development1.93E-02
180GO:0006265: DNA topological change1.93E-02
181GO:0009790: embryo development2.11E-02
182GO:0016024: CDP-diacylglycerol biosynthetic process2.13E-02
183GO:0045037: protein import into chloroplast stroma2.13E-02
184GO:0010582: floral meristem determinacy2.13E-02
185GO:0009637: response to blue light2.25E-02
186GO:0009785: blue light signaling pathway2.33E-02
187GO:0009691: cytokinin biosynthetic process2.33E-02
188GO:0010075: regulation of meristem growth2.33E-02
189GO:0006094: gluconeogenesis2.33E-02
190GO:2000012: regulation of auxin polar transport2.33E-02
191GO:0009934: regulation of meristem structural organization2.54E-02
192GO:0006541: glutamine metabolic process2.54E-02
193GO:0007623: circadian rhythm2.60E-02
194GO:0071732: cellular response to nitric oxide2.76E-02
195GO:0006071: glycerol metabolic process2.98E-02
196GO:0006833: water transport2.98E-02
197GO:0010025: wax biosynthetic process2.98E-02
198GO:0042546: cell wall biogenesis3.02E-02
199GO:0006508: proteolysis3.10E-02
200GO:0005992: trehalose biosynthetic process3.21E-02
201GO:0019344: cysteine biosynthetic process3.21E-02
202GO:0009116: nucleoside metabolic process3.21E-02
203GO:0009944: polarity specification of adaxial/abaxial axis3.21E-02
204GO:0000027: ribosomal large subunit assembly3.21E-02
205GO:0008380: RNA splicing3.24E-02
206GO:0005975: carbohydrate metabolic process3.25E-02
207GO:0048364: root development3.34E-02
208GO:0010073: meristem maintenance3.44E-02
209GO:0051302: regulation of cell division3.44E-02
210GO:0006418: tRNA aminoacylation for protein translation3.44E-02
211GO:0071555: cell wall organization3.48E-02
212GO:0009793: embryo development ending in seed dormancy3.50E-02
213GO:0015992: proton transport3.68E-02
214GO:0006730: one-carbon metabolic process3.93E-02
215GO:0031348: negative regulation of defense response3.93E-02
216GO:0080092: regulation of pollen tube growth3.93E-02
217GO:0016226: iron-sulfur cluster assembly3.93E-02
218GO:0071369: cellular response to ethylene stimulus4.18E-02
219GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.18E-02
220GO:0010091: trichome branching4.43E-02
221GO:0042127: regulation of cell proliferation4.43E-02
222GO:0006096: glycolytic process4.62E-02
223GO:0016117: carotenoid biosynthetic process4.69E-02
224GO:0048367: shoot system development4.76E-02
225GO:0048653: anther development4.96E-02
RankGO TermAdjusted P value
1GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
2GO:0015350: methotrexate transporter activity0.00E+00
3GO:0004056: argininosuccinate lyase activity0.00E+00
4GO:0004358: glutamate N-acetyltransferase activity0.00E+00
5GO:0015231: 5-formyltetrahydrofolate transporter activity0.00E+00
6GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
7GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
8GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity0.00E+00
9GO:0004519: endonuclease activity1.49E-06
10GO:0019843: rRNA binding2.50E-05
11GO:0003723: RNA binding4.44E-05
12GO:0004071: aspartate-ammonia ligase activity5.77E-04
13GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity5.77E-04
14GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity5.77E-04
15GO:0052381: tRNA dimethylallyltransferase activity5.77E-04
16GO:0004160: dihydroxy-acid dehydratase activity5.77E-04
17GO:0004830: tryptophan-tRNA ligase activity5.77E-04
18GO:0042834: peptidoglycan binding5.77E-04
19GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.77E-04
20GO:0003727: single-stranded RNA binding7.62E-04
21GO:0043621: protein self-association1.18E-03
22GO:0008517: folic acid transporter activity1.24E-03
23GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.24E-03
24GO:0010291: carotene beta-ring hydroxylase activity1.24E-03
25GO:0017118: lipoyltransferase activity1.24E-03
26GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.24E-03
27GO:0016415: octanoyltransferase activity1.24E-03
28GO:0004047: aminomethyltransferase activity1.24E-03
29GO:0102083: 7,8-dihydromonapterin aldolase activity1.24E-03
30GO:0004150: dihydroneopterin aldolase activity1.24E-03
31GO:0008805: carbon-monoxide oxygenase activity1.24E-03
32GO:0009672: auxin:proton symporter activity1.36E-03
33GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity2.04E-03
34GO:0016805: dipeptidase activity2.04E-03
35GO:0070330: aromatase activity2.04E-03
36GO:0017150: tRNA dihydrouridine synthase activity2.04E-03
37GO:0042781: 3'-tRNA processing endoribonuclease activity2.04E-03
38GO:0010329: auxin efflux transmembrane transporter activity2.40E-03
39GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity2.96E-03
40GO:0043023: ribosomal large subunit binding2.96E-03
41GO:0008508: bile acid:sodium symporter activity2.96E-03
42GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity2.96E-03
43GO:0001872: (1->3)-beta-D-glucan binding2.96E-03
44GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity2.96E-03
45GO:0009678: hydrogen-translocating pyrophosphatase activity2.96E-03
46GO:0005253: anion channel activity4.00E-03
47GO:0008891: glycolate oxidase activity4.00E-03
48GO:0046556: alpha-L-arabinofuranosidase activity4.00E-03
49GO:0004659: prenyltransferase activity4.00E-03
50GO:0016279: protein-lysine N-methyltransferase activity4.00E-03
51GO:0001053: plastid sigma factor activity4.00E-03
52GO:0004845: uracil phosphoribosyltransferase activity4.00E-03
53GO:0016836: hydro-lyase activity4.00E-03
54GO:0016987: sigma factor activity4.00E-03
55GO:0051539: 4 iron, 4 sulfur cluster binding4.82E-03
56GO:0016773: phosphotransferase activity, alcohol group as acceptor5.13E-03
57GO:0018685: alkane 1-monooxygenase activity5.13E-03
58GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.13E-03
59GO:0008519: ammonium transmembrane transporter activity6.36E-03
60GO:0005247: voltage-gated chloride channel activity6.36E-03
61GO:0030983: mismatched DNA binding6.36E-03
62GO:0004605: phosphatidate cytidylyltransferase activity6.36E-03
63GO:0080030: methyl indole-3-acetate esterase activity6.36E-03
64GO:1990714: hydroxyproline O-galactosyltransferase activity6.36E-03
65GO:0004332: fructose-bisphosphate aldolase activity6.36E-03
66GO:0004124: cysteine synthase activity7.69E-03
67GO:0008195: phosphatidate phosphatase activity7.69E-03
68GO:0004849: uridine kinase activity7.69E-03
69GO:0003690: double-stranded DNA binding8.65E-03
70GO:0004427: inorganic diphosphatase activity9.10E-03
71GO:0016762: xyloglucan:xyloglucosyl transferase activity9.32E-03
72GO:0043022: ribosome binding1.06E-02
73GO:0004650: polygalacturonase activity1.16E-02
74GO:0008237: metallopeptidase activity1.20E-02
75GO:0008173: RNA methyltransferase activity1.22E-02
76GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.22E-02
77GO:0016788: hydrolase activity, acting on ester bonds1.31E-02
78GO:0008889: glycerophosphodiester phosphodiesterase activity1.39E-02
79GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.56E-02
80GO:0016798: hydrolase activity, acting on glycosyl bonds1.60E-02
81GO:0004805: trehalose-phosphatase activity1.74E-02
82GO:0005089: Rho guanyl-nucleotide exchange factor activity1.93E-02
83GO:0004222: metalloendopeptidase activity1.96E-02
84GO:0000976: transcription regulatory region sequence-specific DNA binding2.13E-02
85GO:0004022: alcohol dehydrogenase (NAD) activity2.33E-02
86GO:0031072: heat shock protein binding2.33E-02
87GO:0009982: pseudouridine synthase activity2.33E-02
88GO:0004565: beta-galactosidase activity2.33E-02
89GO:0003993: acid phosphatase activity2.36E-02
90GO:0003735: structural constituent of ribosome2.52E-02
91GO:0004176: ATP-dependent peptidase activity3.68E-02
92GO:0033612: receptor serine/threonine kinase binding3.68E-02
93GO:0008408: 3'-5' exonuclease activity3.68E-02
94GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.91E-02
95GO:0003777: microtubule motor activity4.33E-02
96GO:0047134: protein-disulfide reductase activity4.69E-02
97GO:0004812: aminoacyl-tRNA ligase activity4.69E-02
<
Gene type



Gene DE type