co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G01620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
2	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
3	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	7.78E-08
4	GO:0010207: photosystem II assembly	8.62E-07
5	GO:0015979: photosynthesis	1.28E-05
6	GO:0009773: photosynthetic electron transport in photosystem I	2.04E-05
7	GO:2001141: regulation of RNA biosynthetic process	2.15E-05
8	GO:0015995: chlorophyll biosynthetic process	4.10E-05
9	GO:0042549: photosystem II stabilization	9.17E-05
10	GO:0015801: aromatic amino acid transport	2.36E-04
11	GO:0043087: regulation of GTPase activity	2.36E-04
12	GO:0071461: cellular response to redox state	2.36E-04
13	GO:0034337: RNA folding	2.36E-04
14	GO:0071482: cellular response to light stimulus	2.63E-04
15	GO:0009658: chloroplast organization	3.20E-04
16	GO:0006352: DNA-templated transcription, initiation	5.11E-04
17	GO:0006810: transport	5.20E-04
18	GO:0035304: regulation of protein dephosphorylation	5.24E-04
19	GO:0080005: photosystem stoichiometry adjustment	5.24E-04
20	GO:0000256: allantoin catabolic process	5.24E-04
21	GO:0008616: queuosine biosynthetic process	5.24E-04
22	GO:0006729: tetrahydrobiopterin biosynthetic process	5.24E-04
23	GO:0006094: gluconeogenesis	6.63E-04
24	GO:0009767: photosynthetic electron transport chain	6.63E-04
25	GO:0010136: ureide catabolic process	8.52E-04
26	GO:0044375: regulation of peroxisome size	8.52E-04
27	GO:0046621: negative regulation of organ growth	8.52E-04
28	GO:0006636: unsaturated fatty acid biosynthetic process	9.25E-04
29	GO:1901332: negative regulation of lateral root development	1.21E-03
30	GO:0009152: purine ribonucleotide biosynthetic process	1.21E-03
31	GO:0046653: tetrahydrofolate metabolic process	1.21E-03
32	GO:0006145: purine nucleobase catabolic process	1.21E-03
33	GO:0015994: chlorophyll metabolic process	1.62E-03
34	GO:0010600: regulation of auxin biosynthetic process	1.62E-03
35	GO:0080110: sporopollenin biosynthetic process	2.07E-03
36	GO:0009107: lipoate biosynthetic process	2.07E-03
37	GO:0006465: signal peptide processing	2.07E-03
38	GO:0009735: response to cytokinin	2.20E-03
39	GO:0006655: phosphatidylglycerol biosynthetic process	2.55E-03
40	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.55E-03
41	GO:0055114: oxidation-reduction process	2.79E-03
42	GO:0045926: negative regulation of growth	3.06E-03
43	GO:0010189: vitamin E biosynthetic process	3.06E-03
44	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.06E-03
45	GO:1901259: chloroplast rRNA processing	3.06E-03
46	GO:1900057: positive regulation of leaf senescence	3.61E-03
47	GO:0009645: response to low light intensity stimulus	3.61E-03
48	GO:0010161: red light signaling pathway	3.61E-03
49	GO:0048437: floral organ development	3.61E-03
50	GO:0032259: methylation	3.92E-03
51	GO:0009704: de-etiolation	4.19E-03
52	GO:0016559: peroxisome fission	4.19E-03
53	GO:0007155: cell adhesion	4.19E-03
54	GO:0048564: photosystem I assembly	4.19E-03
55	GO:0010928: regulation of auxin mediated signaling pathway	4.19E-03
56	GO:0042255: ribosome assembly	4.19E-03
57	GO:0006353: DNA-templated transcription, termination	4.19E-03
58	GO:0006526: arginine biosynthetic process	4.79E-03
59	GO:0009657: plastid organization	4.79E-03
60	GO:0051865: protein autoubiquitination	5.43E-03
61	GO:0090305: nucleic acid phosphodiester bond hydrolysis	5.43E-03
62	GO:0006098: pentose-phosphate shunt	5.43E-03
63	GO:0010205: photoinhibition	6.09E-03
64	GO:0043069: negative regulation of programmed cell death	6.78E-03
65	GO:0019684: photosynthesis, light reaction	7.50E-03
66	GO:0016024: CDP-diacylglycerol biosynthetic process	8.25E-03
67	GO:0042254: ribosome biogenesis	8.50E-03
68	GO:0018107: peptidyl-threonine phosphorylation	9.02E-03
69	GO:0009266: response to temperature stimulus	9.82E-03
70	GO:0007031: peroxisome organization	1.06E-02
71	GO:0006096: glycolytic process	1.21E-02
72	GO:0009768: photosynthesis, light harvesting in photosystem I	1.32E-02
73	GO:0003333: amino acid transmembrane transport	1.42E-02
74	GO:0048511: rhythmic process	1.42E-02
75	GO:0016226: iron-sulfur cluster assembly	1.51E-02
76	GO:0030433: ubiquitin-dependent ERAD pathway	1.51E-02
77	GO:0080092: regulation of pollen tube growth	1.51E-02
78	GO:0010017: red or far-red light signaling pathway	1.51E-02
79	GO:0009742: brassinosteroid mediated signaling pathway	1.55E-02
80	GO:0009306: protein secretion	1.70E-02
81	GO:0010584: pollen exine formation	1.70E-02
82	GO:0019722: calcium-mediated signaling	1.70E-02
83	GO:0009561: megagametogenesis	1.70E-02
84	GO:0006520: cellular amino acid metabolic process	2.01E-02
85	GO:0009741: response to brassinosteroid	2.01E-02
86	GO:0006633: fatty acid biosynthetic process	2.30E-02
87	GO:0032502: developmental process	2.45E-02
88	GO:0007267: cell-cell signaling	2.80E-02
89	GO:0010027: thylakoid membrane organization	3.04E-02
90	GO:0042128: nitrate assimilation	3.29E-02
91	GO:0010411: xyloglucan metabolic process	3.41E-02
92	GO:0018298: protein-chromophore linkage	3.67E-02
93	GO:0009817: defense response to fungus, incompatible interaction	3.67E-02
94	GO:0010311: lateral root formation	3.80E-02
95	GO:0007568: aging	4.07E-02
96	GO:0006865: amino acid transport	4.20E-02
97	GO:0009853: photorespiration	4.34E-02
98	GO:0030001: metal ion transport	4.76E-02
99	GO:0006631: fatty acid metabolic process	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0045550: geranylgeranyl reductase activity	0.00E+00
2	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
3	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
4	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
5	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
6	GO:0090711: FMN hydrolase activity	0.00E+00
7	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
8	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.27E-07
9	GO:0048038: quinone binding	1.38E-05
10	GO:0001053: plastid sigma factor activity	3.91E-05
11	GO:0016987: sigma factor activity	3.91E-05
12	GO:0004332: fructose-bisphosphate aldolase activity	9.17E-05
13	GO:0016491: oxidoreductase activity	9.61E-05
14	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	2.36E-04
15	GO:0080132: fatty acid alpha-hydroxylase activity	2.36E-04
16	GO:0010242: oxygen evolving activity	2.36E-04
17	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	2.36E-04
18	GO:0018708: thiol S-methyltransferase activity	5.24E-04
19	GO:0019172: glyoxalase III activity	5.24E-04
20	GO:0047746: chlorophyllase activity	5.24E-04
21	GO:0042389: omega-3 fatty acid desaturase activity	5.24E-04
22	GO:0015173: aromatic amino acid transmembrane transporter activity	5.24E-04
23	GO:0008479: queuine tRNA-ribosyltransferase activity	5.24E-04
24	GO:0019843: rRNA binding	5.30E-04
25	GO:0031072: heat shock protein binding	6.63E-04
26	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	8.52E-04
27	GO:0008864: formyltetrahydrofolate deformylase activity	8.52E-04
28	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	8.52E-04
29	GO:0010277: chlorophyllide a oxygenase [overall] activity	8.52E-04
30	GO:0016992: lipoate synthase activity	8.52E-04
31	GO:0005528: FK506 binding	1.02E-03
32	GO:0051537: 2 iron, 2 sulfur cluster binding	1.16E-03
33	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.21E-03
34	GO:0016851: magnesium chelatase activity	1.21E-03
35	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.27E-03
36	GO:0003727: single-stranded RNA binding	1.59E-03
37	GO:0005275: amine transmembrane transporter activity	2.07E-03
38	GO:0004462: lactoylglutathione lyase activity	2.55E-03
39	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.55E-03
40	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.06E-03
41	GO:0016831: carboxy-lyase activity	3.61E-03
42	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.79E-03
43	GO:0071949: FAD binding	5.43E-03
44	GO:0030234: enzyme regulator activity	6.78E-03
45	GO:0005089: Rho guanyl-nucleotide exchange factor activity	7.50E-03
46	GO:0005509: calcium ion binding	7.70E-03
47	GO:0008168: methyltransferase activity	7.91E-03
48	GO:0043621: protein self-association	8.19E-03
49	GO:0035091: phosphatidylinositol binding	8.19E-03
50	GO:0004565: beta-galactosidase activity	9.02E-03
51	GO:0031624: ubiquitin conjugating enzyme binding	9.82E-03
52	GO:0008266: poly(U) RNA binding	9.82E-03
53	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.02E-02
54	GO:0003690: double-stranded DNA binding	1.06E-02
55	GO:0031409: pigment binding	1.15E-02
56	GO:0016787: hydrolase activity	1.16E-02
57	GO:0051536: iron-sulfur cluster binding	1.24E-02
58	GO:0051082: unfolded protein binding	1.46E-02
59	GO:0050662: coenzyme binding	2.12E-02
60	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.34E-02
61	GO:0004518: nuclease activity	2.45E-02
62	GO:0016168: chlorophyll binding	3.16E-02
63	GO:0042802: identical protein binding	3.21E-02
64	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.41E-02
65	GO:0005096: GTPase activator activity	3.80E-02
66	GO:0004222: metalloendopeptidase activity	3.93E-02
67	GO:0003746: translation elongation factor activity	4.34E-02
68	GO:0046983: protein dimerization activity	4.37E-02