GO Enrichment Analysis of Co-expressed Genes with
AT2G01570
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 2 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 3 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 4 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 5 | GO:0033473: indoleacetic acid conjugate metabolic process | 0.00E+00 |
| 6 | GO:1905615: positive regulation of developmental vegetative growth | 0.00E+00 |
| 7 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 8 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 9 | GO:1903866: palisade mesophyll development | 1.06E-04 |
| 10 | GO:0010480: microsporocyte differentiation | 1.06E-04 |
| 11 | GO:0034971: histone H3-R17 methylation | 1.06E-04 |
| 12 | GO:0033206: meiotic cytokinesis | 1.06E-04 |
| 13 | GO:0034757: negative regulation of iron ion transport | 1.06E-04 |
| 14 | GO:0034970: histone H3-R2 methylation | 1.06E-04 |
| 15 | GO:0034972: histone H3-R26 methylation | 1.06E-04 |
| 16 | GO:0043971: histone H3-K18 acetylation | 1.06E-04 |
| 17 | GO:0009739: response to gibberellin | 1.76E-04 |
| 18 | GO:0010102: lateral root morphogenesis | 2.19E-04 |
| 19 | GO:1902884: positive regulation of response to oxidative stress | 2.48E-04 |
| 20 | GO:0070981: L-asparagine biosynthetic process | 2.48E-04 |
| 21 | GO:0010271: regulation of chlorophyll catabolic process | 2.48E-04 |
| 22 | GO:0006529: asparagine biosynthetic process | 2.48E-04 |
| 23 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 2.48E-04 |
| 24 | GO:0009967: positive regulation of signal transduction | 2.48E-04 |
| 25 | GO:0009658: chloroplast organization | 3.01E-04 |
| 26 | GO:0071705: nitrogen compound transport | 4.12E-04 |
| 27 | GO:0080117: secondary growth | 4.12E-04 |
| 28 | GO:0090391: granum assembly | 4.12E-04 |
| 29 | GO:0010589: leaf proximal/distal pattern formation | 4.12E-04 |
| 30 | GO:0010476: gibberellin mediated signaling pathway | 4.12E-04 |
| 31 | GO:0009909: regulation of flower development | 4.29E-04 |
| 32 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.46E-04 |
| 33 | GO:0071215: cellular response to abscisic acid stimulus | 5.04E-04 |
| 34 | GO:0009800: cinnamic acid biosynthetic process | 5.92E-04 |
| 35 | GO:1901332: negative regulation of lateral root development | 5.92E-04 |
| 36 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 5.92E-04 |
| 37 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 5.92E-04 |
| 38 | GO:0010305: leaf vascular tissue pattern formation | 6.86E-04 |
| 39 | GO:2000038: regulation of stomatal complex development | 7.86E-04 |
| 40 | GO:0006808: regulation of nitrogen utilization | 7.86E-04 |
| 41 | GO:1900864: mitochondrial RNA modification | 7.86E-04 |
| 42 | GO:0071249: cellular response to nitrate | 7.86E-04 |
| 43 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 7.86E-04 |
| 44 | GO:0010090: trichome morphogenesis | 9.50E-04 |
| 45 | GO:0032876: negative regulation of DNA endoreduplication | 9.92E-04 |
| 46 | GO:0030308: negative regulation of cell growth | 9.92E-04 |
| 47 | GO:0009616: virus induced gene silencing | 9.92E-04 |
| 48 | GO:0042793: transcription from plastid promoter | 1.21E-03 |
| 49 | GO:0048831: regulation of shoot system development | 1.21E-03 |
| 50 | GO:1901371: regulation of leaf morphogenesis | 1.21E-03 |
| 51 | GO:0006559: L-phenylalanine catabolic process | 1.21E-03 |
| 52 | GO:0010029: regulation of seed germination | 1.26E-03 |
| 53 | GO:2000033: regulation of seed dormancy process | 1.45E-03 |
| 54 | GO:0048509: regulation of meristem development | 1.45E-03 |
| 55 | GO:2000037: regulation of stomatal complex patterning | 1.45E-03 |
| 56 | GO:1901001: negative regulation of response to salt stress | 1.45E-03 |
| 57 | GO:0000911: cytokinesis by cell plate formation | 1.45E-03 |
| 58 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 1.70E-03 |
| 59 | GO:0006955: immune response | 1.70E-03 |
| 60 | GO:0048437: floral organ development | 1.70E-03 |
| 61 | GO:0006353: DNA-templated transcription, termination | 1.97E-03 |
| 62 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 1.97E-03 |
| 63 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.97E-03 |
| 64 | GO:0042255: ribosome assembly | 1.97E-03 |
| 65 | GO:0006261: DNA-dependent DNA replication | 2.24E-03 |
| 66 | GO:0044030: regulation of DNA methylation | 2.24E-03 |
| 67 | GO:0010093: specification of floral organ identity | 2.24E-03 |
| 68 | GO:0009827: plant-type cell wall modification | 2.24E-03 |
| 69 | GO:0001510: RNA methylation | 2.24E-03 |
| 70 | GO:0010233: phloem transport | 2.24E-03 |
| 71 | GO:0048507: meristem development | 2.53E-03 |
| 72 | GO:0006349: regulation of gene expression by genetic imprinting | 2.84E-03 |
| 73 | GO:0042538: hyperosmotic salinity response | 3.12E-03 |
| 74 | GO:0030422: production of siRNA involved in RNA interference | 3.15E-03 |
| 75 | GO:0010048: vernalization response | 3.15E-03 |
| 76 | GO:0048229: gametophyte development | 3.47E-03 |
| 77 | GO:0048765: root hair cell differentiation | 3.47E-03 |
| 78 | GO:0015706: nitrate transport | 3.81E-03 |
| 79 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 3.81E-03 |
| 80 | GO:0008361: regulation of cell size | 3.81E-03 |
| 81 | GO:0006351: transcription, DNA-templated | 3.99E-03 |
| 82 | GO:0010075: regulation of meristem growth | 4.16E-03 |
| 83 | GO:0009740: gibberellic acid mediated signaling pathway | 4.47E-03 |
| 84 | GO:0010540: basipetal auxin transport | 4.52E-03 |
| 85 | GO:0009934: regulation of meristem structural organization | 4.52E-03 |
| 86 | GO:0006541: glutamine metabolic process | 4.52E-03 |
| 87 | GO:0010020: chloroplast fission | 4.52E-03 |
| 88 | GO:0080188: RNA-directed DNA methylation | 4.88E-03 |
| 89 | GO:0010167: response to nitrate | 4.88E-03 |
| 90 | GO:0009414: response to water deprivation | 5.10E-03 |
| 91 | GO:0006071: glycerol metabolic process | 5.26E-03 |
| 92 | GO:0010187: negative regulation of seed germination | 5.65E-03 |
| 93 | GO:2000377: regulation of reactive oxygen species metabolic process | 5.65E-03 |
| 94 | GO:0000027: ribosomal large subunit assembly | 5.65E-03 |
| 95 | GO:0009863: salicylic acid mediated signaling pathway | 5.65E-03 |
| 96 | GO:0016998: cell wall macromolecule catabolic process | 6.46E-03 |
| 97 | GO:0009734: auxin-activated signaling pathway | 6.64E-03 |
| 98 | GO:0009790: embryo development | 6.93E-03 |
| 99 | GO:0006355: regulation of transcription, DNA-templated | 6.97E-03 |
| 100 | GO:0009686: gibberellin biosynthetic process | 7.30E-03 |
| 101 | GO:0006284: base-excision repair | 7.74E-03 |
| 102 | GO:0070417: cellular response to cold | 8.19E-03 |
| 103 | GO:0010228: vegetative to reproductive phase transition of meristem | 8.58E-03 |
| 104 | GO:0000271: polysaccharide biosynthetic process | 8.64E-03 |
| 105 | GO:0010501: RNA secondary structure unwinding | 8.64E-03 |
| 106 | GO:0010087: phloem or xylem histogenesis | 8.64E-03 |
| 107 | GO:0048653: anther development | 8.64E-03 |
| 108 | GO:0042631: cellular response to water deprivation | 8.64E-03 |
| 109 | GO:0042335: cuticle development | 8.64E-03 |
| 110 | GO:0009416: response to light stimulus | 8.91E-03 |
| 111 | GO:0046323: glucose import | 9.10E-03 |
| 112 | GO:0009960: endosperm development | 9.10E-03 |
| 113 | GO:0045489: pectin biosynthetic process | 9.10E-03 |
| 114 | GO:0048544: recognition of pollen | 9.58E-03 |
| 115 | GO:0009646: response to absence of light | 9.58E-03 |
| 116 | GO:0008380: RNA splicing | 9.79E-03 |
| 117 | GO:0009749: response to glucose | 1.01E-02 |
| 118 | GO:0009651: response to salt stress | 1.02E-02 |
| 119 | GO:0045893: positive regulation of transcription, DNA-templated | 1.06E-02 |
| 120 | GO:0080156: mitochondrial mRNA modification | 1.06E-02 |
| 121 | GO:0032502: developmental process | 1.11E-02 |
| 122 | GO:0009639: response to red or far red light | 1.21E-02 |
| 123 | GO:0010252: auxin homeostasis | 1.21E-02 |
| 124 | GO:0006970: response to osmotic stress | 1.37E-02 |
| 125 | GO:0010027: thylakoid membrane organization | 1.37E-02 |
| 126 | GO:0006468: protein phosphorylation | 1.54E-02 |
| 127 | GO:0048767: root hair elongation | 1.71E-02 |
| 128 | GO:0000160: phosphorelay signal transduction system | 1.71E-02 |
| 129 | GO:0010218: response to far red light | 1.77E-02 |
| 130 | GO:0006811: ion transport | 1.77E-02 |
| 131 | GO:0009910: negative regulation of flower development | 1.83E-02 |
| 132 | GO:0045892: negative regulation of transcription, DNA-templated | 1.92E-02 |
| 133 | GO:0009867: jasmonic acid mediated signaling pathway | 1.95E-02 |
| 134 | GO:0016051: carbohydrate biosynthetic process | 1.95E-02 |
| 135 | GO:0030001: metal ion transport | 2.14E-02 |
| 136 | GO:0009640: photomorphogenesis | 2.34E-02 |
| 137 | GO:0010114: response to red light | 2.34E-02 |
| 138 | GO:0009926: auxin polar transport | 2.34E-02 |
| 139 | GO:0048364: root development | 2.43E-02 |
| 140 | GO:0009636: response to toxic substance | 2.54E-02 |
| 141 | GO:0009965: leaf morphogenesis | 2.54E-02 |
| 142 | GO:0009736: cytokinin-activated signaling pathway | 2.89E-02 |
| 143 | GO:0006417: regulation of translation | 3.11E-02 |
| 144 | GO:0048367: shoot system development | 3.33E-02 |
| 145 | GO:0009738: abscisic acid-activated signaling pathway | 4.00E-02 |
| 146 | GO:0009058: biosynthetic process | 4.53E-02 |
| 147 | GO:0009845: seed germination | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003727: single-stranded RNA binding | 2.39E-05 |
| 2 | GO:0004016: adenylate cyclase activity | 1.06E-04 |
| 3 | GO:0042834: peptidoglycan binding | 1.06E-04 |
| 4 | GO:0004071: aspartate-ammonia ligase activity | 1.06E-04 |
| 5 | GO:0009884: cytokinin receptor activity | 2.48E-04 |
| 6 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 2.48E-04 |
| 7 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 2.48E-04 |
| 8 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 2.48E-04 |
| 9 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 2.48E-04 |
| 10 | GO:0005078: MAP-kinase scaffold activity | 2.48E-04 |
| 11 | GO:0016805: dipeptidase activity | 4.12E-04 |
| 12 | GO:0005034: osmosensor activity | 4.12E-04 |
| 13 | GO:0016707: gibberellin 3-beta-dioxygenase activity | 4.12E-04 |
| 14 | GO:0008469: histone-arginine N-methyltransferase activity | 4.12E-04 |
| 15 | GO:0004180: carboxypeptidase activity | 4.12E-04 |
| 16 | GO:0045548: phenylalanine ammonia-lyase activity | 4.12E-04 |
| 17 | GO:0032947: protein complex scaffold | 4.12E-04 |
| 18 | GO:0070181: small ribosomal subunit rRNA binding | 4.12E-04 |
| 19 | GO:0005354: galactose transmembrane transporter activity | 5.92E-04 |
| 20 | GO:0010385: double-stranded methylated DNA binding | 7.86E-04 |
| 21 | GO:0008725: DNA-3-methyladenine glycosylase activity | 9.92E-04 |
| 22 | GO:0080030: methyl indole-3-acetate esterase activity | 1.21E-03 |
| 23 | GO:0019900: kinase binding | 1.45E-03 |
| 24 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.60E-03 |
| 25 | GO:0003723: RNA binding | 1.84E-03 |
| 26 | GO:0003697: single-stranded DNA binding | 1.94E-03 |
| 27 | GO:0004674: protein serine/threonine kinase activity | 2.01E-03 |
| 28 | GO:0008173: RNA methyltransferase activity | 2.24E-03 |
| 29 | GO:0000989: transcription factor activity, transcription factor binding | 2.53E-03 |
| 30 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 2.53E-03 |
| 31 | GO:0009672: auxin:proton symporter activity | 2.84E-03 |
| 32 | GO:0004673: protein histidine kinase activity | 3.15E-03 |
| 33 | GO:0008171: O-methyltransferase activity | 3.15E-03 |
| 34 | GO:0003690: double-stranded DNA binding | 3.46E-03 |
| 35 | GO:0042803: protein homodimerization activity | 3.50E-03 |
| 36 | GO:0004871: signal transducer activity | 3.50E-03 |
| 37 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.16E-03 |
| 38 | GO:0000155: phosphorelay sensor kinase activity | 4.16E-03 |
| 39 | GO:0009982: pseudouridine synthase activity | 4.16E-03 |
| 40 | GO:0010329: auxin efflux transmembrane transporter activity | 4.16E-03 |
| 41 | GO:0008134: transcription factor binding | 5.65E-03 |
| 42 | GO:0043424: protein histidine kinase binding | 6.05E-03 |
| 43 | GO:0033612: receptor serine/threonine kinase binding | 6.46E-03 |
| 44 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.87E-03 |
| 45 | GO:0018024: histone-lysine N-methyltransferase activity | 8.19E-03 |
| 46 | GO:0004402: histone acetyltransferase activity | 8.64E-03 |
| 47 | GO:0004527: exonuclease activity | 9.10E-03 |
| 48 | GO:0001085: RNA polymerase II transcription factor binding | 9.10E-03 |
| 49 | GO:0005355: glucose transmembrane transporter activity | 9.58E-03 |
| 50 | GO:0016759: cellulose synthase activity | 1.21E-02 |
| 51 | GO:0003677: DNA binding | 1.29E-02 |
| 52 | GO:0016788: hydrolase activity, acting on ester bonds | 1.30E-02 |
| 53 | GO:0003735: structural constituent of ribosome | 1.50E-02 |
| 54 | GO:0004004: ATP-dependent RNA helicase activity | 1.54E-02 |
| 55 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.83E-02 |
| 56 | GO:0042393: histone binding | 2.14E-02 |
| 57 | GO:0043621: protein self-association | 2.47E-02 |
| 58 | GO:0003777: microtubule motor activity | 3.11E-02 |
| 59 | GO:0016874: ligase activity | 3.56E-02 |
| 60 | GO:0003729: mRNA binding | 3.58E-02 |
| 61 | GO:0008026: ATP-dependent helicase activity | 3.88E-02 |
| 62 | GO:0016758: transferase activity, transferring hexosyl groups | 4.28E-02 |
| 63 | GO:0019843: rRNA binding | 4.36E-02 |
| 64 | GO:0003676: nucleic acid binding | 4.36E-02 |
| 65 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.78E-02 |
| 66 | GO:0015144: carbohydrate transmembrane transporter activity | 4.95E-02 |