co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G01505

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048263: determination of dorsal identity	0.00E+00
2	GO:0090322: regulation of superoxide metabolic process	0.00E+00
3	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
4	GO:0046486: glycerolipid metabolic process	0.00E+00
5	GO:0019988: charged-tRNA amino acid modification	0.00E+00
6	GO:0090615: mitochondrial mRNA processing	0.00E+00
7	GO:0000492: box C/D snoRNP assembly	0.00E+00
8	GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	0.00E+00
9	GO:0045014: negative regulation of transcription by glucose	0.00E+00
10	GO:0000819: sister chromatid segregation	0.00E+00
11	GO:0000491: small nucleolar ribonucleoprotein complex assembly	0.00E+00
12	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
13	GO:0006518: peptide metabolic process	9.47E-06
14	GO:0006364: rRNA processing	1.79E-05
15	GO:0042127: regulation of cell proliferation	1.31E-04
16	GO:0006401: RNA catabolic process	1.67E-04
17	GO:1905039: carboxylic acid transmembrane transport	2.36E-04
18	GO:1905200: gibberellic acid transmembrane transport	2.36E-04
19	GO:0080112: seed growth	2.36E-04
20	GO:0048829: root cap development	4.42E-04
21	GO:2000071: regulation of defense response by callose deposition	5.24E-04
22	GO:1901529: positive regulation of anion channel activity	5.24E-04
23	GO:0010569: regulation of double-strand break repair via homologous recombination	5.24E-04
24	GO:0006650: glycerophospholipid metabolic process	5.24E-04
25	GO:0010588: cotyledon vascular tissue pattern formation	6.63E-04
26	GO:0009887: animal organ morphogenesis	7.46E-04
27	GO:0010020: chloroplast fission	7.46E-04
28	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	8.52E-04
29	GO:0046168: glycerol-3-phosphate catabolic process	8.52E-04
30	GO:0009733: response to auxin	9.58E-04
31	GO:0010073: meristem maintenance	1.12E-03
32	GO:0045017: glycerolipid biosynthetic process	1.21E-03
33	GO:0010371: regulation of gibberellin biosynthetic process	1.21E-03
34	GO:0009102: biotin biosynthetic process	1.21E-03
35	GO:0007276: gamete generation	1.21E-03
36	GO:0006072: glycerol-3-phosphate metabolic process	1.21E-03
37	GO:0009855: determination of bilateral symmetry	1.21E-03
38	GO:0003333: amino acid transmembrane transport	1.23E-03
39	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.35E-03
40	GO:0006221: pyrimidine nucleotide biosynthetic process	1.62E-03
41	GO:0009658: chloroplast organization	1.67E-03
42	GO:0009734: auxin-activated signaling pathway	1.72E-03
43	GO:0008033: tRNA processing	1.86E-03
44	GO:0010087: phloem or xylem histogenesis	1.86E-03
45	GO:0010305: leaf vascular tissue pattern formation	2.00E-03
46	GO:0016123: xanthophyll biosynthetic process	2.07E-03
47	GO:0016120: carotene biosynthetic process	2.07E-03
48	GO:0060918: auxin transport	2.55E-03
49	GO:0042793: transcription from plastid promoter	2.55E-03
50	GO:0009643: photosynthetic acclimation	2.55E-03
51	GO:0016554: cytidine to uridine editing	2.55E-03
52	GO:1904668: positive regulation of ubiquitin protein ligase activity	2.55E-03
53	GO:0010583: response to cyclopentenone	2.63E-03
54	GO:0051301: cell division	3.00E-03
55	GO:0010014: meristem initiation	3.06E-03
56	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.06E-03
57	GO:0009942: longitudinal axis specification	3.06E-03
58	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.06E-03
59	GO:0010310: regulation of hydrogen peroxide metabolic process	3.06E-03
60	GO:0080060: integument development	3.06E-03
61	GO:0010444: guard mother cell differentiation	3.61E-03
62	GO:0000712: resolution of meiotic recombination intermediates	3.61E-03
63	GO:0010374: stomatal complex development	3.61E-03
64	GO:1900056: negative regulation of leaf senescence	3.61E-03
65	GO:0000082: G1/S transition of mitotic cell cycle	3.61E-03
66	GO:0006402: mRNA catabolic process	4.19E-03
67	GO:0010492: maintenance of shoot apical meristem identity	4.19E-03
68	GO:0052543: callose deposition in cell wall	4.19E-03
69	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.19E-03
70	GO:0009642: response to light intensity	4.19E-03
71	GO:0042255: ribosome assembly	4.19E-03
72	GO:0046620: regulation of organ growth	4.19E-03
73	GO:0006353: DNA-templated transcription, termination	4.19E-03
74	GO:0040008: regulation of growth	4.49E-03
75	GO:0009793: embryo development ending in seed dormancy	4.64E-03
76	GO:0019430: removal of superoxide radicals	4.79E-03
77	GO:0010052: guard cell differentiation	4.79E-03
78	GO:0032544: plastid translation	4.79E-03
79	GO:0007389: pattern specification process	4.79E-03
80	GO:0048574: long-day photoperiodism, flowering	4.79E-03
81	GO:0048589: developmental growth	5.43E-03
82	GO:0006865: amino acid transport	5.61E-03
83	GO:1900865: chloroplast RNA modification	6.09E-03
84	GO:0031425: chloroplast RNA processing	6.09E-03
85	GO:0006535: cysteine biosynthetic process from serine	6.78E-03
86	GO:0009641: shade avoidance	6.78E-03
87	GO:0016441: posttranscriptional gene silencing	6.78E-03
88	GO:0006949: syncytium formation	6.78E-03
89	GO:0006259: DNA metabolic process	6.78E-03
90	GO:0006265: DNA topological change	7.50E-03
91	GO:1903507: negative regulation of nucleic acid-templated transcription	7.50E-03
92	GO:0009750: response to fructose	7.50E-03
93	GO:0046856: phosphatidylinositol dephosphorylation	7.50E-03
94	GO:0009682: induced systemic resistance	7.50E-03
95	GO:0008285: negative regulation of cell proliferation	7.50E-03
96	GO:0015770: sucrose transport	7.50E-03
97	GO:0009744: response to sucrose	7.57E-03
98	GO:0010152: pollen maturation	8.25E-03
99	GO:0006312: mitotic recombination	8.25E-03
100	GO:0012501: programmed cell death	8.25E-03
101	GO:0010075: regulation of meristem growth	9.02E-03
102	GO:0010102: lateral root morphogenesis	9.02E-03
103	GO:0031347: regulation of defense response	9.17E-03
104	GO:0048768: root hair cell tip growth	9.82E-03
105	GO:0080188: RNA-directed DNA methylation	1.06E-02
106	GO:0009901: anther dehiscence	1.06E-02
107	GO:0006636: unsaturated fatty acid biosynthetic process	1.15E-02
108	GO:0006863: purine nucleobase transport	1.15E-02
109	GO:2000377: regulation of reactive oxygen species metabolic process	1.24E-02
110	GO:0019344: cysteine biosynthetic process	1.24E-02
111	GO:0048367: shoot system development	1.25E-02
112	GO:0009740: gibberellic acid mediated signaling pathway	1.37E-02
113	GO:0010431: seed maturation	1.42E-02
114	GO:0009624: response to nematode	1.46E-02
115	GO:0030245: cellulose catabolic process	1.51E-02
116	GO:0051726: regulation of cell cycle	1.55E-02
117	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.61E-02
118	GO:0009686: gibberellin biosynthetic process	1.61E-02
119	GO:0048443: stamen development	1.70E-02
120	GO:0080022: primary root development	1.91E-02
121	GO:0010118: stomatal movement	1.91E-02
122	GO:0009741: response to brassinosteroid	2.01E-02
123	GO:0071472: cellular response to salt stress	2.01E-02
124	GO:0007059: chromosome segregation	2.12E-02
125	GO:0009749: response to glucose	2.23E-02
126	GO:0008654: phospholipid biosynthetic process	2.23E-02
127	GO:0006508: proteolysis	2.30E-02
128	GO:0080156: mitochondrial mRNA modification	2.34E-02
129	GO:0002229: defense response to oomycetes	2.34E-02
130	GO:0006351: transcription, DNA-templated	2.35E-02
131	GO:0032502: developmental process	2.45E-02
132	GO:0045490: pectin catabolic process	2.53E-02
133	GO:0030163: protein catabolic process	2.56E-02
134	GO:0009451: RNA modification	2.59E-02
135	GO:0006464: cellular protein modification process	2.68E-02
136	GO:0009828: plant-type cell wall loosening	2.68E-02
137	GO:0019760: glucosinolate metabolic process	2.68E-02
138	GO:0030154: cell differentiation	3.26E-02
139	GO:0009627: systemic acquired resistance	3.29E-02
140	GO:0015995: chlorophyll biosynthetic process	3.41E-02
141	GO:0016311: dephosphorylation	3.54E-02
142	GO:0010218: response to far red light	3.93E-02
143	GO:0009867: jasmonic acid mediated signaling pathway	4.34E-02
144	GO:0045893: positive regulation of transcription, DNA-templated	4.34E-02
145	GO:0007049: cell cycle	4.35E-02
146	GO:0048366: leaf development	4.58E-02
147	GO:0030001: metal ion transport	4.76E-02
148	GO:0080167: response to karrikin	4.82E-02
149	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0004835: tubulin-tyrosine ligase activity	0.00E+00
2	GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity	0.00E+00
3	GO:0009899: ent-kaurene synthase activity	0.00E+00
4	GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity	0.00E+00
5	GO:0016763: transferase activity, transferring pentosyl groups	0.00E+00
6	GO:0008859: exoribonuclease II activity	0.00E+00
7	GO:0004141: dethiobiotin synthase activity	0.00E+00
8	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	2.36E-04
9	GO:0004654: polyribonucleotide nucleotidyltransferase activity	2.36E-04
10	GO:1905201: gibberellin transmembrane transporter activity	2.36E-04
11	GO:0042389: omega-3 fatty acid desaturase activity	5.24E-04
12	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	5.24E-04
13	GO:0000175: 3'-5'-exoribonuclease activity	6.63E-04
14	GO:0003723: RNA binding	7.44E-04
15	GO:0016805: dipeptidase activity	8.52E-04
16	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	8.52E-04
17	GO:0009041: uridylate kinase activity	1.21E-03
18	GO:0003916: DNA topoisomerase activity	1.21E-03
19	GO:0030570: pectate lyase activity	1.47E-03
20	GO:0010011: auxin binding	1.62E-03
21	GO:0010328: auxin influx transmembrane transporter activity	1.62E-03
22	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.55E-03
23	GO:0097027: ubiquitin-protein transferase activator activity	2.55E-03
24	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	2.55E-03
25	GO:0004784: superoxide dismutase activity	2.55E-03
26	GO:0004124: cysteine synthase activity	3.06E-03
27	GO:0010997: anaphase-promoting complex binding	3.06E-03
28	GO:0016832: aldehyde-lyase activity	3.06E-03
29	GO:0030515: snoRNA binding	3.61E-03
30	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.73E-03
31	GO:0004519: endonuclease activity	4.76E-03
32	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	4.79E-03
33	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.79E-03
34	GO:0004222: metalloendopeptidase activity	5.11E-03
35	GO:0008515: sucrose transmembrane transporter activity	7.50E-03
36	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	8.25E-03
37	GO:0015293: symporter activity	8.51E-03
38	GO:0003725: double-stranded RNA binding	9.02E-03
39	GO:0003712: transcription cofactor activity	1.06E-02
40	GO:0004190: aspartic-type endopeptidase activity	1.06E-02
41	GO:0005215: transporter activity	1.06E-02
42	GO:0051119: sugar transmembrane transporter activity	1.06E-02
43	GO:0015171: amino acid transmembrane transporter activity	1.13E-02
44	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.17E-02
45	GO:0003714: transcription corepressor activity	1.24E-02
46	GO:0005345: purine nucleobase transmembrane transporter activity	1.32E-02
47	GO:0016874: ligase activity	1.37E-02
48	GO:0008094: DNA-dependent ATPase activity	1.42E-02
49	GO:0003779: actin binding	1.42E-02
50	GO:0004540: ribonuclease activity	1.42E-02
51	GO:0042803: protein homodimerization activity	1.46E-02
52	GO:0008810: cellulase activity	1.61E-02
53	GO:0003727: single-stranded RNA binding	1.70E-02
54	GO:0019843: rRNA binding	1.83E-02
55	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.01E-02
56	GO:0001085: RNA polymerase II transcription factor binding	2.01E-02
57	GO:0003677: DNA binding	2.03E-02
58	GO:0030170: pyridoxal phosphate binding	2.03E-02
59	GO:0019901: protein kinase binding	2.23E-02
60	GO:0048038: quinone binding	2.34E-02
61	GO:0016791: phosphatase activity	2.68E-02
62	GO:0008289: lipid binding	2.71E-02
63	GO:0005200: structural constituent of cytoskeleton	2.80E-02
64	GO:0008237: metallopeptidase activity	2.80E-02
65	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.54E-02
66	GO:0008168: methyltransferase activity	3.76E-02
67	GO:0005096: GTPase activator activity	3.80E-02
68	GO:0046872: metal ion binding	3.80E-02
69	GO:0015238: drug transmembrane transporter activity	3.80E-02
70	GO:0000287: magnesium ion binding	3.83E-02
71	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.93E-02
72	GO:0003676: nucleic acid binding	3.94E-02
73	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.07E-02
74	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.07E-02
75	GO:0003993: acid phosphatase activity	4.48E-02
76	GO:0004672: protein kinase activity	5.00E-02