GO Enrichment Analysis of Co-expressed Genes with
AT2G01420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 2 | GO:0050776: regulation of immune response | 0.00E+00 |
| 3 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 4 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 5 | GO:0009606: tropism | 0.00E+00 |
| 6 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 7 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 8 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 9 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 10 | GO:0007172: signal complex assembly | 0.00E+00 |
| 11 | GO:0010480: microsporocyte differentiation | 0.00E+00 |
| 12 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.78E-11 |
| 13 | GO:0006468: protein phosphorylation | 1.52E-05 |
| 14 | GO:0030422: production of siRNA involved in RNA interference | 3.04E-05 |
| 15 | GO:2000038: regulation of stomatal complex development | 6.26E-05 |
| 16 | GO:0009934: regulation of meristem structural organization | 7.21E-05 |
| 17 | GO:0048437: floral organ development | 2.54E-04 |
| 18 | GO:0034970: histone H3-R2 methylation | 3.11E-04 |
| 19 | GO:0034972: histone H3-R26 methylation | 3.11E-04 |
| 20 | GO:0043971: histone H3-K18 acetylation | 3.11E-04 |
| 21 | GO:0034971: histone H3-R17 methylation | 3.11E-04 |
| 22 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.11E-04 |
| 23 | GO:0034757: negative regulation of iron ion transport | 3.11E-04 |
| 24 | GO:0009416: response to light stimulus | 3.79E-04 |
| 25 | GO:0032502: developmental process | 4.56E-04 |
| 26 | GO:0000373: Group II intron splicing | 4.73E-04 |
| 27 | GO:0030154: cell differentiation | 6.78E-04 |
| 28 | GO:0010254: nectary development | 6.81E-04 |
| 29 | GO:0010434: bract formation | 6.81E-04 |
| 30 | GO:0070981: L-asparagine biosynthetic process | 6.81E-04 |
| 31 | GO:0010271: regulation of chlorophyll catabolic process | 6.81E-04 |
| 32 | GO:0048439: flower morphogenesis | 6.81E-04 |
| 33 | GO:0009786: regulation of asymmetric cell division | 6.81E-04 |
| 34 | GO:0006529: asparagine biosynthetic process | 6.81E-04 |
| 35 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 6.81E-04 |
| 36 | GO:2000123: positive regulation of stomatal complex development | 6.81E-04 |
| 37 | GO:0009733: response to auxin | 7.31E-04 |
| 38 | GO:0048229: gametophyte development | 7.52E-04 |
| 39 | GO:0010582: floral meristem determinacy | 8.60E-04 |
| 40 | GO:0010075: regulation of meristem growth | 9.73E-04 |
| 41 | GO:0009767: photosynthetic electron transport chain | 9.73E-04 |
| 42 | GO:0080117: secondary growth | 1.10E-03 |
| 43 | GO:0010589: leaf proximal/distal pattern formation | 1.10E-03 |
| 44 | GO:0071705: nitrogen compound transport | 1.10E-03 |
| 45 | GO:0051604: protein maturation | 1.10E-03 |
| 46 | GO:0016050: vesicle organization | 1.10E-03 |
| 47 | GO:0009954: proximal/distal pattern formation | 1.10E-03 |
| 48 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.50E-03 |
| 49 | GO:0044211: CTP salvage | 1.58E-03 |
| 50 | GO:0019048: modulation by virus of host morphology or physiology | 1.58E-03 |
| 51 | GO:0009800: cinnamic acid biosynthetic process | 1.58E-03 |
| 52 | GO:0031048: chromatin silencing by small RNA | 1.58E-03 |
| 53 | GO:0046739: transport of virus in multicellular host | 1.58E-03 |
| 54 | GO:2000904: regulation of starch metabolic process | 1.58E-03 |
| 55 | GO:1902476: chloride transmembrane transport | 1.58E-03 |
| 56 | GO:0051513: regulation of monopolar cell growth | 1.58E-03 |
| 57 | GO:0007231: osmosensory signaling pathway | 1.58E-03 |
| 58 | GO:0051639: actin filament network formation | 1.58E-03 |
| 59 | GO:0006306: DNA methylation | 1.82E-03 |
| 60 | GO:0071249: cellular response to nitrate | 2.12E-03 |
| 61 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 2.12E-03 |
| 62 | GO:0022622: root system development | 2.12E-03 |
| 63 | GO:0033500: carbohydrate homeostasis | 2.12E-03 |
| 64 | GO:0051567: histone H3-K9 methylation | 2.12E-03 |
| 65 | GO:0044206: UMP salvage | 2.12E-03 |
| 66 | GO:0044205: 'de novo' UMP biosynthetic process | 2.12E-03 |
| 67 | GO:0051764: actin crosslink formation | 2.12E-03 |
| 68 | GO:0009686: gibberellin biosynthetic process | 2.17E-03 |
| 69 | GO:0010082: regulation of root meristem growth | 2.17E-03 |
| 70 | GO:0010158: abaxial cell fate specification | 2.71E-03 |
| 71 | GO:0032876: negative regulation of DNA endoreduplication | 2.71E-03 |
| 72 | GO:0030308: negative regulation of cell growth | 2.71E-03 |
| 73 | GO:0010375: stomatal complex patterning | 2.71E-03 |
| 74 | GO:0009616: virus induced gene silencing | 2.71E-03 |
| 75 | GO:0006544: glycine metabolic process | 2.71E-03 |
| 76 | GO:1902183: regulation of shoot apical meristem development | 2.71E-03 |
| 77 | GO:0016123: xanthophyll biosynthetic process | 2.71E-03 |
| 78 | GO:0048653: anther development | 2.76E-03 |
| 79 | GO:0009909: regulation of flower development | 2.88E-03 |
| 80 | GO:0009958: positive gravitropism | 2.98E-03 |
| 81 | GO:0035194: posttranscriptional gene silencing by RNA | 3.35E-03 |
| 82 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.35E-03 |
| 83 | GO:0010315: auxin efflux | 3.35E-03 |
| 84 | GO:0006559: L-phenylalanine catabolic process | 3.35E-03 |
| 85 | GO:0048831: regulation of shoot system development | 3.35E-03 |
| 86 | GO:0006206: pyrimidine nucleobase metabolic process | 3.35E-03 |
| 87 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.35E-03 |
| 88 | GO:0016458: gene silencing | 3.35E-03 |
| 89 | GO:0006563: L-serine metabolic process | 3.35E-03 |
| 90 | GO:0010405: arabinogalactan protein metabolic process | 3.35E-03 |
| 91 | GO:0009959: negative gravitropism | 3.35E-03 |
| 92 | GO:0009734: auxin-activated signaling pathway | 3.51E-03 |
| 93 | GO:0010067: procambium histogenesis | 4.03E-03 |
| 94 | GO:0048509: regulation of meristem development | 4.03E-03 |
| 95 | GO:0030488: tRNA methylation | 4.03E-03 |
| 96 | GO:2000037: regulation of stomatal complex patterning | 4.03E-03 |
| 97 | GO:0010050: vegetative phase change | 4.76E-03 |
| 98 | GO:0006821: chloride transport | 4.76E-03 |
| 99 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 4.76E-03 |
| 100 | GO:0032880: regulation of protein localization | 4.76E-03 |
| 101 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 4.76E-03 |
| 102 | GO:0010161: red light signaling pathway | 4.76E-03 |
| 103 | GO:0009610: response to symbiotic fungus | 4.76E-03 |
| 104 | GO:0006955: immune response | 4.76E-03 |
| 105 | GO:0051607: defense response to virus | 5.02E-03 |
| 106 | GO:0001522: pseudouridine synthesis | 5.53E-03 |
| 107 | GO:0030162: regulation of proteolysis | 5.53E-03 |
| 108 | GO:0042255: ribosome assembly | 5.53E-03 |
| 109 | GO:0009850: auxin metabolic process | 5.53E-03 |
| 110 | GO:0046620: regulation of organ growth | 5.53E-03 |
| 111 | GO:0048766: root hair initiation | 5.53E-03 |
| 112 | GO:0010029: regulation of seed germination | 5.62E-03 |
| 113 | GO:0009827: plant-type cell wall modification | 6.33E-03 |
| 114 | GO:0001510: RNA methylation | 6.33E-03 |
| 115 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.33E-03 |
| 116 | GO:0010100: negative regulation of photomorphogenesis | 6.33E-03 |
| 117 | GO:0006526: arginine biosynthetic process | 6.33E-03 |
| 118 | GO:0007389: pattern specification process | 6.33E-03 |
| 119 | GO:0044030: regulation of DNA methylation | 6.33E-03 |
| 120 | GO:0010093: specification of floral organ identity | 6.33E-03 |
| 121 | GO:0010099: regulation of photomorphogenesis | 6.33E-03 |
| 122 | GO:0009051: pentose-phosphate shunt, oxidative branch | 7.19E-03 |
| 123 | GO:2000024: regulation of leaf development | 7.19E-03 |
| 124 | GO:0006783: heme biosynthetic process | 7.19E-03 |
| 125 | GO:0000902: cell morphogenesis | 7.19E-03 |
| 126 | GO:0000160: phosphorelay signal transduction system | 7.29E-03 |
| 127 | GO:0009638: phototropism | 8.07E-03 |
| 128 | GO:0035999: tetrahydrofolate interconversion | 8.07E-03 |
| 129 | GO:0031425: chloroplast RNA processing | 8.07E-03 |
| 130 | GO:0048829: root cap development | 9.00E-03 |
| 131 | GO:0009641: shade avoidance | 9.00E-03 |
| 132 | GO:0006816: calcium ion transport | 9.96E-03 |
| 133 | GO:0009773: photosynthetic electron transport in photosystem I | 9.96E-03 |
| 134 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.10E-02 |
| 135 | GO:0015706: nitrate transport | 1.10E-02 |
| 136 | GO:0008361: regulation of cell size | 1.10E-02 |
| 137 | GO:0009926: auxin polar transport | 1.14E-02 |
| 138 | GO:2000012: regulation of auxin polar transport | 1.20E-02 |
| 139 | GO:0009785: blue light signaling pathway | 1.20E-02 |
| 140 | GO:0010628: positive regulation of gene expression | 1.20E-02 |
| 141 | GO:0006006: glucose metabolic process | 1.20E-02 |
| 142 | GO:0016310: phosphorylation | 1.26E-02 |
| 143 | GO:0006541: glutamine metabolic process | 1.31E-02 |
| 144 | GO:0010207: photosystem II assembly | 1.31E-02 |
| 145 | GO:0010223: secondary shoot formation | 1.31E-02 |
| 146 | GO:0005975: carbohydrate metabolic process | 1.31E-02 |
| 147 | GO:0080188: RNA-directed DNA methylation | 1.42E-02 |
| 148 | GO:0010167: response to nitrate | 1.42E-02 |
| 149 | GO:0090351: seedling development | 1.42E-02 |
| 150 | GO:0070588: calcium ion transmembrane transport | 1.42E-02 |
| 151 | GO:0006071: glycerol metabolic process | 1.53E-02 |
| 152 | GO:0009736: cytokinin-activated signaling pathway | 1.54E-02 |
| 153 | GO:0010187: negative regulation of seed germination | 1.65E-02 |
| 154 | GO:0051017: actin filament bundle assembly | 1.65E-02 |
| 155 | GO:0005992: trehalose biosynthetic process | 1.65E-02 |
| 156 | GO:0009723: response to ethylene | 1.67E-02 |
| 157 | GO:0006418: tRNA aminoacylation for protein translation | 1.77E-02 |
| 158 | GO:0006825: copper ion transport | 1.77E-02 |
| 159 | GO:0080167: response to karrikin | 1.83E-02 |
| 160 | GO:0016998: cell wall macromolecule catabolic process | 1.89E-02 |
| 161 | GO:0016567: protein ubiquitination | 1.98E-02 |
| 162 | GO:0009740: gibberellic acid mediated signaling pathway | 2.06E-02 |
| 163 | GO:0071215: cellular response to abscisic acid stimulus | 2.14E-02 |
| 164 | GO:0001944: vasculature development | 2.14E-02 |
| 165 | GO:0010227: floral organ abscission | 2.14E-02 |
| 166 | GO:0006284: base-excision repair | 2.27E-02 |
| 167 | GO:0010089: xylem development | 2.27E-02 |
| 168 | GO:0007165: signal transduction | 2.38E-02 |
| 169 | GO:0070417: cellular response to cold | 2.41E-02 |
| 170 | GO:0008284: positive regulation of cell proliferation | 2.41E-02 |
| 171 | GO:0042631: cellular response to water deprivation | 2.55E-02 |
| 172 | GO:0010087: phloem or xylem histogenesis | 2.55E-02 |
| 173 | GO:0010305: leaf vascular tissue pattern formation | 2.68E-02 |
| 174 | GO:0006342: chromatin silencing | 2.68E-02 |
| 175 | GO:0048544: recognition of pollen | 2.83E-02 |
| 176 | GO:0009646: response to absence of light | 2.83E-02 |
| 177 | GO:0009058: biosynthetic process | 2.89E-02 |
| 178 | GO:0008654: phospholipid biosynthetic process | 2.97E-02 |
| 179 | GO:0071554: cell wall organization or biogenesis | 3.12E-02 |
| 180 | GO:0031047: gene silencing by RNA | 3.27E-02 |
| 181 | GO:0009630: gravitropism | 3.27E-02 |
| 182 | GO:0071281: cellular response to iron ion | 3.42E-02 |
| 183 | GO:0010090: trichome morphogenesis | 3.42E-02 |
| 184 | GO:0010252: auxin homeostasis | 3.58E-02 |
| 185 | GO:0009639: response to red or far red light | 3.58E-02 |
| 186 | GO:0040008: regulation of growth | 3.61E-02 |
| 187 | GO:0007267: cell-cell signaling | 3.73E-02 |
| 188 | GO:0007623: circadian rhythm | 3.78E-02 |
| 189 | GO:0009816: defense response to bacterium, incompatible interaction | 4.22E-02 |
| 190 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.23E-02 |
| 191 | GO:0009739: response to gibberellin | 4.23E-02 |
| 192 | GO:0015995: chlorophyll biosynthetic process | 4.55E-02 |
| 193 | GO:0048481: plant ovule development | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 2 | GO:0004674: protein serine/threonine kinase activity | 1.65E-07 |
| 3 | GO:0016301: kinase activity | 1.23E-05 |
| 4 | GO:0032549: ribonucleoside binding | 1.57E-05 |
| 5 | GO:0004672: protein kinase activity | 1.23E-04 |
| 6 | GO:0033612: receptor serine/threonine kinase binding | 1.59E-04 |
| 7 | GO:0042834: peptidoglycan binding | 3.11E-04 |
| 8 | GO:0004008: copper-exporting ATPase activity | 3.11E-04 |
| 9 | GO:0004071: aspartate-ammonia ligase activity | 3.11E-04 |
| 10 | GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | 3.11E-04 |
| 11 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.11E-04 |
| 12 | GO:0010313: phytochrome binding | 3.11E-04 |
| 13 | GO:0004830: tryptophan-tRNA ligase activity | 3.11E-04 |
| 14 | GO:0005524: ATP binding | 5.54E-04 |
| 15 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 6.81E-04 |
| 16 | GO:0015929: hexosaminidase activity | 6.81E-04 |
| 17 | GO:0004563: beta-N-acetylhexosaminidase activity | 6.81E-04 |
| 18 | GO:0009884: cytokinin receptor activity | 6.81E-04 |
| 19 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 6.81E-04 |
| 20 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 6.81E-04 |
| 21 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 6.81E-04 |
| 22 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 6.81E-04 |
| 23 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.52E-04 |
| 24 | GO:0001054: RNA polymerase I activity | 7.52E-04 |
| 25 | GO:0017150: tRNA dihydrouridine synthase activity | 1.10E-03 |
| 26 | GO:0045548: phenylalanine ammonia-lyase activity | 1.10E-03 |
| 27 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 1.10E-03 |
| 28 | GO:0005034: osmosensor activity | 1.10E-03 |
| 29 | GO:0016707: gibberellin 3-beta-dioxygenase activity | 1.10E-03 |
| 30 | GO:0008469: histone-arginine N-methyltransferase activity | 1.10E-03 |
| 31 | GO:0004871: signal transducer activity | 1.44E-03 |
| 32 | GO:0035197: siRNA binding | 1.58E-03 |
| 33 | GO:0043621: protein self-association | 1.91E-03 |
| 34 | GO:0010385: double-stranded methylated DNA binding | 2.12E-03 |
| 35 | GO:0019199: transmembrane receptor protein kinase activity | 2.12E-03 |
| 36 | GO:0005253: anion channel activity | 2.12E-03 |
| 37 | GO:0004845: uracil phosphoribosyltransferase activity | 2.12E-03 |
| 38 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.12E-03 |
| 39 | GO:0004372: glycine hydroxymethyltransferase activity | 2.71E-03 |
| 40 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.71E-03 |
| 41 | GO:0005247: voltage-gated chloride channel activity | 3.35E-03 |
| 42 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.35E-03 |
| 43 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.35E-03 |
| 44 | GO:0004650: polygalacturonase activity | 3.54E-03 |
| 45 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.03E-03 |
| 46 | GO:0004849: uridine kinase activity | 4.03E-03 |
| 47 | GO:0019900: kinase binding | 4.03E-03 |
| 48 | GO:0016829: lyase activity | 5.84E-03 |
| 49 | GO:0004252: serine-type endopeptidase activity | 6.03E-03 |
| 50 | GO:0005375: copper ion transmembrane transporter activity | 6.33E-03 |
| 51 | GO:0008173: RNA methyltransferase activity | 6.33E-03 |
| 52 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 7.19E-03 |
| 53 | GO:0009672: auxin:proton symporter activity | 8.07E-03 |
| 54 | GO:0004673: protein histidine kinase activity | 9.00E-03 |
| 55 | GO:0004805: trehalose-phosphatase activity | 9.00E-03 |
| 56 | GO:0008171: O-methyltransferase activity | 9.00E-03 |
| 57 | GO:0042802: identical protein binding | 1.08E-02 |
| 58 | GO:0004521: endoribonuclease activity | 1.10E-02 |
| 59 | GO:0010329: auxin efflux transmembrane transporter activity | 1.20E-02 |
| 60 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.20E-02 |
| 61 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.20E-02 |
| 62 | GO:0031072: heat shock protein binding | 1.20E-02 |
| 63 | GO:0000155: phosphorelay sensor kinase activity | 1.20E-02 |
| 64 | GO:0005262: calcium channel activity | 1.20E-02 |
| 65 | GO:0009982: pseudouridine synthase activity | 1.20E-02 |
| 66 | GO:0008083: growth factor activity | 1.31E-02 |
| 67 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.31E-02 |
| 68 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.54E-02 |
| 69 | GO:0008134: transcription factor binding | 1.65E-02 |
| 70 | GO:0031625: ubiquitin protein ligase binding | 1.70E-02 |
| 71 | GO:0043424: protein histidine kinase binding | 1.77E-02 |
| 72 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.77E-02 |
| 73 | GO:0035251: UDP-glucosyltransferase activity | 1.89E-02 |
| 74 | GO:0003727: single-stranded RNA binding | 2.27E-02 |
| 75 | GO:0008514: organic anion transmembrane transporter activity | 2.27E-02 |
| 76 | GO:0004812: aminoacyl-tRNA ligase activity | 2.41E-02 |
| 77 | GO:0042803: protein homodimerization activity | 2.43E-02 |
| 78 | GO:0004402: histone acetyltransferase activity | 2.55E-02 |
| 79 | GO:0001085: RNA polymerase II transcription factor binding | 2.68E-02 |
| 80 | GO:0030246: carbohydrate binding | 2.86E-02 |
| 81 | GO:0046983: protein dimerization activity | 2.91E-02 |
| 82 | GO:0019901: protein kinase binding | 2.97E-02 |
| 83 | GO:0000156: phosphorelay response regulator activity | 3.42E-02 |
| 84 | GO:0051015: actin filament binding | 3.42E-02 |
| 85 | GO:0005515: protein binding | 3.43E-02 |
| 86 | GO:0016759: cellulose synthase activity | 3.58E-02 |
| 87 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 3.73E-02 |
| 88 | GO:0016413: O-acetyltransferase activity | 3.89E-02 |
| 89 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 4.72E-02 |
| 90 | GO:0008236: serine-type peptidase activity | 4.72E-02 |
| 91 | GO:0003677: DNA binding | 4.93E-02 |