GO Enrichment Analysis of Co-expressed Genes with
AT2G01320
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 3 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 4 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 5 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 6 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 7 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 8 | GO:0009451: RNA modification | 8.11E-09 |
| 9 | GO:1901259: chloroplast rRNA processing | 7.53E-07 |
| 10 | GO:0009657: plastid organization | 2.77E-06 |
| 11 | GO:0010239: chloroplast mRNA processing | 1.19E-05 |
| 12 | GO:0016556: mRNA modification | 1.19E-05 |
| 13 | GO:0042793: transcription from plastid promoter | 5.33E-05 |
| 14 | GO:0010063: positive regulation of trichoblast fate specification | 1.69E-04 |
| 15 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.69E-04 |
| 16 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.69E-04 |
| 17 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.69E-04 |
| 18 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 1.69E-04 |
| 19 | GO:0018026: peptidyl-lysine monomethylation | 3.83E-04 |
| 20 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 3.83E-04 |
| 21 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.83E-04 |
| 22 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.83E-04 |
| 23 | GO:1900871: chloroplast mRNA modification | 3.83E-04 |
| 24 | GO:0042780: tRNA 3'-end processing | 6.25E-04 |
| 25 | GO:0005977: glycogen metabolic process | 6.25E-04 |
| 26 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 6.25E-04 |
| 27 | GO:0001927: exocyst assembly | 6.25E-04 |
| 28 | GO:0045910: negative regulation of DNA recombination | 6.25E-04 |
| 29 | GO:0048281: inflorescence morphogenesis | 6.25E-04 |
| 30 | GO:0006954: inflammatory response | 6.25E-04 |
| 31 | GO:0009658: chloroplast organization | 8.13E-04 |
| 32 | GO:1902476: chloride transmembrane transport | 8.93E-04 |
| 33 | GO:0010071: root meristem specification | 8.93E-04 |
| 34 | GO:0051513: regulation of monopolar cell growth | 8.93E-04 |
| 35 | GO:0010148: transpiration | 8.93E-04 |
| 36 | GO:0051601: exocyst localization | 8.93E-04 |
| 37 | GO:0044205: 'de novo' UMP biosynthetic process | 1.18E-03 |
| 38 | GO:0010021: amylopectin biosynthetic process | 1.18E-03 |
| 39 | GO:0048497: maintenance of floral organ identity | 1.50E-03 |
| 40 | GO:0010158: abaxial cell fate specification | 1.50E-03 |
| 41 | GO:0009616: virus induced gene silencing | 1.50E-03 |
| 42 | GO:0050665: hydrogen peroxide biosynthetic process | 1.85E-03 |
| 43 | GO:0042549: photosystem II stabilization | 1.85E-03 |
| 44 | GO:0035194: posttranscriptional gene silencing by RNA | 1.85E-03 |
| 45 | GO:0009913: epidermal cell differentiation | 1.85E-03 |
| 46 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.85E-03 |
| 47 | GO:0009790: embryo development | 2.10E-03 |
| 48 | GO:0009942: longitudinal axis specification | 2.22E-03 |
| 49 | GO:0009099: valine biosynthetic process | 2.22E-03 |
| 50 | GO:0009854: oxidative photosynthetic carbon pathway | 2.22E-03 |
| 51 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.22E-03 |
| 52 | GO:0042026: protein refolding | 2.22E-03 |
| 53 | GO:0009082: branched-chain amino acid biosynthetic process | 2.22E-03 |
| 54 | GO:0006458: 'de novo' protein folding | 2.22E-03 |
| 55 | GO:0017148: negative regulation of translation | 2.22E-03 |
| 56 | GO:0010103: stomatal complex morphogenesis | 2.61E-03 |
| 57 | GO:0010050: vegetative phase change | 2.61E-03 |
| 58 | GO:0048437: floral organ development | 2.61E-03 |
| 59 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 2.61E-03 |
| 60 | GO:0006821: chloride transport | 2.61E-03 |
| 61 | GO:0070370: cellular heat acclimation | 2.61E-03 |
| 62 | GO:0048481: plant ovule development | 2.89E-03 |
| 63 | GO:0006353: DNA-templated transcription, termination | 3.02E-03 |
| 64 | GO:0001522: pseudouridine synthesis | 3.02E-03 |
| 65 | GO:0009850: auxin metabolic process | 3.02E-03 |
| 66 | GO:0009734: auxin-activated signaling pathway | 3.40E-03 |
| 67 | GO:0009097: isoleucine biosynthetic process | 3.46E-03 |
| 68 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.46E-03 |
| 69 | GO:0007389: pattern specification process | 3.46E-03 |
| 70 | GO:0060321: acceptance of pollen | 3.46E-03 |
| 71 | GO:0001558: regulation of cell growth | 3.46E-03 |
| 72 | GO:0000373: Group II intron splicing | 3.91E-03 |
| 73 | GO:0000902: cell morphogenesis | 3.91E-03 |
| 74 | GO:0006098: pentose-phosphate shunt | 3.91E-03 |
| 75 | GO:1900865: chloroplast RNA modification | 4.38E-03 |
| 76 | GO:0031425: chloroplast RNA processing | 4.38E-03 |
| 77 | GO:0006298: mismatch repair | 4.87E-03 |
| 78 | GO:0006259: DNA metabolic process | 4.87E-03 |
| 79 | GO:0019538: protein metabolic process | 4.87E-03 |
| 80 | GO:0006535: cysteine biosynthetic process from serine | 4.87E-03 |
| 81 | GO:0009793: embryo development ending in seed dormancy | 5.23E-03 |
| 82 | GO:0006265: DNA topological change | 5.38E-03 |
| 83 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.38E-03 |
| 84 | GO:0009073: aromatic amino acid family biosynthetic process | 5.38E-03 |
| 85 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.91E-03 |
| 86 | GO:0045037: protein import into chloroplast stroma | 5.91E-03 |
| 87 | GO:0010582: floral meristem determinacy | 5.91E-03 |
| 88 | GO:0006094: gluconeogenesis | 6.46E-03 |
| 89 | GO:0009691: cytokinin biosynthetic process | 6.46E-03 |
| 90 | GO:0051603: proteolysis involved in cellular protein catabolic process | 6.54E-03 |
| 91 | GO:0010207: photosystem II assembly | 7.02E-03 |
| 92 | GO:0071732: cellular response to nitric oxide | 7.60E-03 |
| 93 | GO:0080188: RNA-directed DNA methylation | 7.60E-03 |
| 94 | GO:0005975: carbohydrate metabolic process | 7.91E-03 |
| 95 | GO:0009553: embryo sac development | 8.73E-03 |
| 96 | GO:0019344: cysteine biosynthetic process | 8.81E-03 |
| 97 | GO:0009116: nucleoside metabolic process | 8.81E-03 |
| 98 | GO:0009944: polarity specification of adaxial/abaxial axis | 8.81E-03 |
| 99 | GO:0051302: regulation of cell division | 9.44E-03 |
| 100 | GO:0006418: tRNA aminoacylation for protein translation | 9.44E-03 |
| 101 | GO:0015992: proton transport | 1.01E-02 |
| 102 | GO:0061077: chaperone-mediated protein folding | 1.01E-02 |
| 103 | GO:0006730: one-carbon metabolic process | 1.08E-02 |
| 104 | GO:0016226: iron-sulfur cluster assembly | 1.08E-02 |
| 105 | GO:0071369: cellular response to ethylene stimulus | 1.14E-02 |
| 106 | GO:0001944: vasculature development | 1.14E-02 |
| 107 | GO:0042127: regulation of cell proliferation | 1.21E-02 |
| 108 | GO:0008033: tRNA processing | 1.36E-02 |
| 109 | GO:0006662: glycerol ether metabolic process | 1.43E-02 |
| 110 | GO:0048868: pollen tube development | 1.43E-02 |
| 111 | GO:0009741: response to brassinosteroid | 1.43E-02 |
| 112 | GO:0010305: leaf vascular tissue pattern formation | 1.43E-02 |
| 113 | GO:0007059: chromosome segregation | 1.51E-02 |
| 114 | GO:0009646: response to absence of light | 1.51E-02 |
| 115 | GO:0019252: starch biosynthetic process | 1.58E-02 |
| 116 | GO:0008654: phospholipid biosynthetic process | 1.58E-02 |
| 117 | GO:0009851: auxin biosynthetic process | 1.58E-02 |
| 118 | GO:0048825: cotyledon development | 1.58E-02 |
| 119 | GO:0002229: defense response to oomycetes | 1.66E-02 |
| 120 | GO:0032502: developmental process | 1.74E-02 |
| 121 | GO:0010583: response to cyclopentenone | 1.74E-02 |
| 122 | GO:0071281: cellular response to iron ion | 1.82E-02 |
| 123 | GO:0010252: auxin homeostasis | 1.90E-02 |
| 124 | GO:0010027: thylakoid membrane organization | 2.16E-02 |
| 125 | GO:0001666: response to hypoxia | 2.16E-02 |
| 126 | GO:0042254: ribosome biogenesis | 2.47E-02 |
| 127 | GO:0000160: phosphorelay signal transduction system | 2.70E-02 |
| 128 | GO:0009407: toxin catabolic process | 2.79E-02 |
| 129 | GO:0010200: response to chitin | 3.10E-02 |
| 130 | GO:0034599: cellular response to oxidative stress | 3.18E-02 |
| 131 | GO:0015979: photosynthesis | 3.42E-02 |
| 132 | GO:0009926: auxin polar transport | 3.69E-02 |
| 133 | GO:0051707: response to other organism | 3.69E-02 |
| 134 | GO:0009965: leaf morphogenesis | 4.01E-02 |
| 135 | GO:0009664: plant-type cell wall organization | 4.34E-02 |
| 136 | GO:0006364: rRNA processing | 4.57E-02 |
| 137 | GO:0009736: cytokinin-activated signaling pathway | 4.57E-02 |
| 138 | GO:0006397: mRNA processing | 4.60E-02 |
| 139 | GO:0048364: root development | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 2 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 3 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 4 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 5 | GO:0004519: endonuclease activity | 1.24E-10 |
| 6 | GO:0003723: RNA binding | 1.37E-04 |
| 7 | GO:0004830: tryptophan-tRNA ligase activity | 1.69E-04 |
| 8 | GO:0008836: diaminopimelate decarboxylase activity | 1.69E-04 |
| 9 | GO:0052381: tRNA dimethylallyltransferase activity | 1.69E-04 |
| 10 | GO:0004160: dihydroxy-acid dehydratase activity | 1.69E-04 |
| 11 | GO:0019843: rRNA binding | 2.48E-04 |
| 12 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.83E-04 |
| 13 | GO:0004047: aminomethyltransferase activity | 3.83E-04 |
| 14 | GO:0019156: isoamylase activity | 3.83E-04 |
| 15 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 6.25E-04 |
| 16 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 8.93E-04 |
| 17 | GO:0043023: ribosomal large subunit binding | 8.93E-04 |
| 18 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 8.93E-04 |
| 19 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 8.93E-04 |
| 20 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 8.93E-04 |
| 21 | GO:0005253: anion channel activity | 1.18E-03 |
| 22 | GO:0042277: peptide binding | 1.18E-03 |
| 23 | GO:0008891: glycolate oxidase activity | 1.18E-03 |
| 24 | GO:0016279: protein-lysine N-methyltransferase activity | 1.18E-03 |
| 25 | GO:0016836: hydro-lyase activity | 1.18E-03 |
| 26 | GO:0019199: transmembrane receptor protein kinase activity | 1.18E-03 |
| 27 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.50E-03 |
| 28 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.50E-03 |
| 29 | GO:0005247: voltage-gated chloride channel activity | 1.85E-03 |
| 30 | GO:0030983: mismatched DNA binding | 1.85E-03 |
| 31 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.85E-03 |
| 32 | GO:0004332: fructose-bisphosphate aldolase activity | 1.85E-03 |
| 33 | GO:0004556: alpha-amylase activity | 1.85E-03 |
| 34 | GO:0003684: damaged DNA binding | 1.87E-03 |
| 35 | GO:0004124: cysteine synthase activity | 2.22E-03 |
| 36 | GO:0004427: inorganic diphosphatase activity | 2.61E-03 |
| 37 | GO:0043022: ribosome binding | 3.02E-03 |
| 38 | GO:0004222: metalloendopeptidase activity | 3.18E-03 |
| 39 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 3.46E-03 |
| 40 | GO:0003724: RNA helicase activity | 3.46E-03 |
| 41 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.15E-03 |
| 42 | GO:0009672: auxin:proton symporter activity | 4.38E-03 |
| 43 | GO:0004185: serine-type carboxypeptidase activity | 4.70E-03 |
| 44 | GO:0044183: protein binding involved in protein folding | 5.38E-03 |
| 45 | GO:0009982: pseudouridine synthase activity | 6.46E-03 |
| 46 | GO:0004565: beta-galactosidase activity | 6.46E-03 |
| 47 | GO:0010329: auxin efflux transmembrane transporter activity | 6.46E-03 |
| 48 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.02E-03 |
| 49 | GO:0003887: DNA-directed DNA polymerase activity | 8.20E-03 |
| 50 | GO:0043424: protein histidine kinase binding | 9.44E-03 |
| 51 | GO:0008408: 3'-5' exonuclease activity | 1.01E-02 |
| 52 | GO:0004176: ATP-dependent peptidase activity | 1.01E-02 |
| 53 | GO:0047134: protein-disulfide reductase activity | 1.28E-02 |
| 54 | GO:0004812: aminoacyl-tRNA ligase activity | 1.28E-02 |
| 55 | GO:0004527: exonuclease activity | 1.43E-02 |
| 56 | GO:0004791: thioredoxin-disulfide reductase activity | 1.51E-02 |
| 57 | GO:0016853: isomerase activity | 1.51E-02 |
| 58 | GO:0010181: FMN binding | 1.51E-02 |
| 59 | GO:0000156: phosphorelay response regulator activity | 1.82E-02 |
| 60 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.82E-02 |
| 61 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.99E-02 |
| 62 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.99E-02 |
| 63 | GO:0008237: metallopeptidase activity | 1.99E-02 |
| 64 | GO:0008168: methyltransferase activity | 2.33E-02 |
| 65 | GO:0004601: peroxidase activity | 2.42E-02 |
| 66 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.85E-02 |
| 67 | GO:0003746: translation elongation factor activity | 3.08E-02 |
| 68 | GO:0004364: glutathione transferase activity | 3.59E-02 |
| 69 | GO:0043621: protein self-association | 3.91E-02 |
| 70 | GO:0003690: double-stranded DNA binding | 4.68E-02 |