Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G80870

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009606: tropism0.00E+00
2GO:0090322: regulation of superoxide metabolic process0.00E+00
3GO:1903224: regulation of endodermal cell differentiation0.00E+00
4GO:0045014: negative regulation of transcription by glucose0.00E+00
5GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
6GO:0035884: arabinan biosynthetic process0.00E+00
7GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
8GO:0045184: establishment of protein localization0.00E+00
9GO:0009451: RNA modification4.99E-10
10GO:0042793: transcription from plastid promoter3.69E-08
11GO:0010583: response to cyclopentenone8.83E-05
12GO:0009734: auxin-activated signaling pathway1.71E-04
13GO:0016998: cell wall macromolecule catabolic process3.07E-04
14GO:1901259: chloroplast rRNA processing3.21E-04
15GO:0009658: chloroplast organization3.59E-04
16GO:0006955: immune response4.14E-04
17GO:0048437: floral organ development4.14E-04
18GO:1903866: palisade mesophyll development4.32E-04
19GO:1905039: carboxylic acid transmembrane transport4.32E-04
20GO:0034757: negative regulation of iron ion transport4.32E-04
21GO:1905200: gibberellic acid transmembrane transport4.32E-04
22GO:0032204: regulation of telomere maintenance4.32E-04
23GO:0042659: regulation of cell fate specification4.32E-04
24GO:0010063: positive regulation of trichoblast fate specification4.32E-04
25GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process4.32E-04
26GO:0010480: microsporocyte differentiation4.32E-04
27GO:0090063: positive regulation of microtubule nucleation4.32E-04
28GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic4.32E-04
29GO:0080112: seed growth4.32E-04
30GO:0030198: extracellular matrix organization4.32E-04
31GO:0035987: endodermal cell differentiation4.32E-04
32GO:0090558: plant epidermis development4.32E-04
33GO:0006436: tryptophanyl-tRNA aminoacylation4.32E-04
34GO:0043247: telomere maintenance in response to DNA damage4.32E-04
35GO:0033044: regulation of chromosome organization4.32E-04
36GO:0007389: pattern specification process6.32E-04
37GO:0009657: plastid organization6.32E-04
38GO:0009793: embryo development ending in seed dormancy7.60E-04
39GO:1900865: chloroplast RNA modification8.92E-04
40GO:2000123: positive regulation of stomatal complex development9.33E-04
41GO:0006420: arginyl-tRNA aminoacylation9.33E-04
42GO:0000086: G2/M transition of mitotic cell cycle9.33E-04
43GO:0010271: regulation of chlorophyll catabolic process9.33E-04
44GO:0018026: peptidyl-lysine monomethylation9.33E-04
45GO:0033566: gamma-tubulin complex localization9.33E-04
46GO:0009662: etioplast organization9.33E-04
47GO:0048255: mRNA stabilization9.33E-04
48GO:1902326: positive regulation of chlorophyll biosynthetic process9.33E-04
49GO:0010569: regulation of double-strand break repair via homologous recombination9.33E-04
50GO:1904143: positive regulation of carotenoid biosynthetic process9.33E-04
51GO:0080009: mRNA methylation9.33E-04
52GO:0006535: cysteine biosynthetic process from serine1.04E-03
53GO:0048229: gametophyte development1.19E-03
54GO:0010411: xyloglucan metabolic process1.50E-03
55GO:0032504: multicellular organism reproduction1.52E-03
56GO:0090391: granum assembly1.52E-03
57GO:0006518: peptide metabolic process1.52E-03
58GO:0090708: specification of plant organ axis polarity1.52E-03
59GO:0042780: tRNA 3'-end processing1.52E-03
60GO:0001578: microtubule bundle formation1.52E-03
61GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.52E-03
62GO:0080117: secondary growth1.52E-03
63GO:0010102: lateral root morphogenesis1.55E-03
64GO:0048481: plant ovule development1.71E-03
65GO:0009934: regulation of meristem structural organization1.75E-03
66GO:0010371: regulation of gibberellin biosynthetic process2.19E-03
67GO:1902476: chloride transmembrane transport2.19E-03
68GO:0046739: transport of virus in multicellular host2.19E-03
69GO:0010239: chloroplast mRNA processing2.19E-03
70GO:0016572: histone phosphorylation2.19E-03
71GO:0007004: telomere maintenance via telomerase2.19E-03
72GO:0010071: root meristem specification2.19E-03
73GO:0051513: regulation of monopolar cell growth2.19E-03
74GO:0010306: rhamnogalacturonan II biosynthetic process2.19E-03
75GO:0019344: cysteine biosynthetic process2.42E-03
76GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.42E-03
77GO:2000038: regulation of stomatal complex development2.95E-03
78GO:0051322: anaphase2.95E-03
79GO:0006021: inositol biosynthetic process2.95E-03
80GO:0006221: pyrimidine nucleotide biosynthetic process2.95E-03
81GO:0009755: hormone-mediated signaling pathway2.95E-03
82GO:0030104: water homeostasis2.95E-03
83GO:0006479: protein methylation2.95E-03
84GO:1900864: mitochondrial RNA modification2.95E-03
85GO:0042546: cell wall biogenesis3.38E-03
86GO:0006282: regulation of DNA repair3.78E-03
87GO:0010375: stomatal complex patterning3.78E-03
88GO:0048497: maintenance of floral organ identity3.78E-03
89GO:1902456: regulation of stomatal opening4.68E-03
90GO:0048831: regulation of shoot system development4.68E-03
91GO:0010389: regulation of G2/M transition of mitotic cell cycle4.68E-03
92GO:0016554: cytidine to uridine editing4.68E-03
93GO:0009643: photosynthetic acclimation4.68E-03
94GO:0010315: auxin efflux4.68E-03
95GO:0009913: epidermal cell differentiation4.68E-03
96GO:0010304: PSII associated light-harvesting complex II catabolic process4.68E-03
97GO:0048868: pollen tube development4.83E-03
98GO:2000067: regulation of root morphogenesis5.64E-03
99GO:0009082: branched-chain amino acid biosynthetic process5.64E-03
100GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)5.64E-03
101GO:0009955: adaxial/abaxial pattern specification5.64E-03
102GO:0009942: longitudinal axis specification5.64E-03
103GO:0048509: regulation of meristem development5.64E-03
104GO:0009099: valine biosynthetic process5.64E-03
105GO:0010310: regulation of hydrogen peroxide metabolic process5.64E-03
106GO:0000082: G1/S transition of mitotic cell cycle6.67E-03
107GO:0010103: stomatal complex morphogenesis6.67E-03
108GO:0010044: response to aluminum ion6.67E-03
109GO:0006821: chloride transport6.67E-03
110GO:0009553: embryo sac development7.10E-03
111GO:0009828: plant-type cell wall loosening7.24E-03
112GO:0010252: auxin homeostasis7.24E-03
113GO:0048766: root hair initiation7.76E-03
114GO:0009642: response to light intensity7.76E-03
115GO:0055075: potassium ion homeostasis7.76E-03
116GO:0052543: callose deposition in cell wall7.76E-03
117GO:0000105: histidine biosynthetic process7.76E-03
118GO:0001522: pseudouridine synthesis7.76E-03
119GO:0010027: thylakoid membrane organization8.65E-03
120GO:0006303: double-strand break repair via nonhomologous end joining8.91E-03
121GO:0009097: isoleucine biosynthetic process8.91E-03
122GO:0032544: plastid translation8.91E-03
123GO:0010497: plasmodesmata-mediated intercellular transport8.91E-03
124GO:0019430: removal of superoxide radicals8.91E-03
125GO:0000373: Group II intron splicing1.01E-02
126GO:0048589: developmental growth1.01E-02
127GO:0010332: response to gamma radiation1.01E-02
128GO:0000902: cell morphogenesis1.01E-02
129GO:0006508: proteolysis1.05E-02
130GO:0042761: very long-chain fatty acid biosynthetic process1.14E-02
131GO:2000280: regulation of root development1.14E-02
132GO:0000160: phosphorelay signal transduction system1.19E-02
133GO:0048829: root cap development1.27E-02
134GO:0006259: DNA metabolic process1.27E-02
135GO:0006865: amino acid transport1.37E-02
136GO:0006265: DNA topological change1.41E-02
137GO:0009089: lysine biosynthetic process via diaminopimelate1.41E-02
138GO:0009750: response to fructose1.41E-02
139GO:0015770: sucrose transport1.41E-02
140GO:0045037: protein import into chloroplast stroma1.55E-02
141GO:0010152: pollen maturation1.55E-02
142GO:0006790: sulfur compound metabolic process1.55E-02
143GO:0012501: programmed cell death1.55E-02
144GO:0010075: regulation of meristem growth1.70E-02
145GO:0009691: cytokinin biosynthetic process1.70E-02
146GO:0010588: cotyledon vascular tissue pattern formation1.70E-02
147GO:0009926: auxin polar transport1.86E-02
148GO:0009733: response to auxin1.88E-02
149GO:0080188: RNA-directed DNA methylation2.01E-02
150GO:0009901: anther dehiscence2.01E-02
151GO:0046854: phosphatidylinositol phosphorylation2.01E-02
152GO:0006071: glycerol metabolic process2.17E-02
153GO:0006833: water transport2.17E-02
154GO:0000027: ribosomal large subunit assembly2.33E-02
155GO:0009664: plant-type cell wall organization2.34E-02
156GO:0051302: regulation of cell division2.50E-02
157GO:0019953: sexual reproduction2.50E-02
158GO:0006418: tRNA aminoacylation for protein translation2.50E-02
159GO:0010073: meristem maintenance2.50E-02
160GO:0009736: cytokinin-activated signaling pathway2.51E-02
161GO:0006364: rRNA processing2.51E-02
162GO:0003333: amino acid transmembrane transport2.68E-02
163GO:0015992: proton transport2.68E-02
164GO:0010431: seed maturation2.68E-02
165GO:0016226: iron-sulfur cluster assembly2.85E-02
166GO:0010082: regulation of root meristem growth3.04E-02
167GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.04E-02
168GO:0071215: cellular response to abscisic acid stimulus3.04E-02
169GO:0042127: regulation of cell proliferation3.22E-02
170GO:0048443: stamen development3.22E-02
171GO:0008284: positive regulation of cell proliferation3.41E-02
172GO:0070417: cellular response to cold3.41E-02
173GO:0048653: anther development3.61E-02
174GO:0000226: microtubule cytoskeleton organization3.61E-02
175GO:0008033: tRNA processing3.61E-02
176GO:0010087: phloem or xylem histogenesis3.61E-02
177GO:0010118: stomatal movement3.61E-02
178GO:0006396: RNA processing3.68E-02
179GO:0009416: response to light stimulus3.79E-02
180GO:0010305: leaf vascular tissue pattern formation3.81E-02
181GO:0006662: glycerol ether metabolic process3.81E-02
182GO:0009741: response to brassinosteroid3.81E-02
183GO:0009958: positive gravitropism3.81E-02
184GO:0009646: response to absence of light4.01E-02
185GO:0048544: recognition of pollen4.01E-02
186GO:0007018: microtubule-based movement4.01E-02
187GO:0006814: sodium ion transport4.01E-02
188GO:0007059: chromosome segregation4.01E-02
189GO:0048825: cotyledon development4.21E-02
190GO:0009749: response to glucose4.21E-02
191GO:0009851: auxin biosynthetic process4.21E-02
192GO:0080156: mitochondrial mRNA modification4.42E-02
193GO:0032502: developmental process4.63E-02
194GO:0009630: gravitropism4.63E-02
195GO:0016032: viral process4.63E-02
196GO:0019761: glucosinolate biosynthetic process4.63E-02
197GO:0030163: protein catabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0005201: extracellular matrix structural constituent0.00E+00
2GO:0042834: peptidoglycan binding0.00E+00
3GO:0071633: dihydroceramidase activity0.00E+00
4GO:0052834: inositol monophosphate phosphatase activity0.00E+00
5GO:0004401: histidinol-phosphatase activity0.00E+00
6GO:0004519: endonuclease activity1.55E-08
7GO:0003723: RNA binding2.15E-08
8GO:0008237: metallopeptidase activity1.25E-04
9GO:0004222: metalloendopeptidase activity2.86E-04
10GO:0004176: ATP-dependent peptidase activity3.07E-04
11GO:0004124: cysteine synthase activity3.21E-04
12GO:0019843: rRNA binding4.05E-04
13GO:0052381: tRNA dimethylallyltransferase activity4.32E-04
14GO:0004160: dihydroxy-acid dehydratase activity4.32E-04
15GO:0016274: protein-arginine N-methyltransferase activity4.32E-04
16GO:1905201: gibberellin transmembrane transporter activity4.32E-04
17GO:0008836: diaminopimelate decarboxylase activity4.32E-04
18GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity4.32E-04
19GO:0004830: tryptophan-tRNA ligase activity4.32E-04
20GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity4.32E-04
21GO:0004016: adenylate cyclase activity4.32E-04
22GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity4.32E-04
23GO:0010347: L-galactose-1-phosphate phosphatase activity4.32E-04
24GO:0008173: RNA methyltransferase activity6.32E-04
25GO:0016762: xyloglucan:xyloglucosyl transferase activity7.72E-04
26GO:0009672: auxin:proton symporter activity8.92E-04
27GO:0009884: cytokinin receptor activity9.33E-04
28GO:0004047: aminomethyltransferase activity9.33E-04
29GO:0004814: arginine-tRNA ligase activity9.33E-04
30GO:0052832: inositol monophosphate 3-phosphatase activity9.33E-04
31GO:0008934: inositol monophosphate 1-phosphatase activity9.33E-04
32GO:0052833: inositol monophosphate 4-phosphatase activity9.33E-04
33GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity9.33E-04
34GO:0016798: hydrolase activity, acting on glycosyl bonds1.50E-03
35GO:0046524: sucrose-phosphate synthase activity1.52E-03
36GO:0017150: tRNA dihydrouridine synthase activity1.52E-03
37GO:0016805: dipeptidase activity1.52E-03
38GO:0042781: 3'-tRNA processing endoribonuclease activity1.52E-03
39GO:0005034: osmosensor activity1.52E-03
40GO:0009982: pseudouridine synthase activity1.55E-03
41GO:0010329: auxin efflux transmembrane transporter activity1.55E-03
42GO:0009678: hydrogen-translocating pyrophosphatase activity2.19E-03
43GO:0009041: uridylate kinase activity2.19E-03
44GO:0008508: bile acid:sodium symporter activity2.19E-03
45GO:0001872: (1->3)-beta-D-glucan binding2.19E-03
46GO:0005215: transporter activity2.28E-03
47GO:0016836: hydro-lyase activity2.95E-03
48GO:0005253: anion channel activity2.95E-03
49GO:0016279: protein-lysine N-methyltransferase activity2.95E-03
50GO:0010011: auxin binding2.95E-03
51GO:0030570: pectate lyase activity3.51E-03
52GO:0005275: amine transmembrane transporter activity3.78E-03
53GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.78E-03
54GO:0016773: phosphotransferase activity, alcohol group as acceptor3.78E-03
55GO:0030332: cyclin binding4.68E-03
56GO:0004784: superoxide dismutase activity4.68E-03
57GO:0005247: voltage-gated chloride channel activity4.68E-03
58GO:0003777: microtubule motor activity5.35E-03
59GO:0019901: protein kinase binding5.57E-03
60GO:0008195: phosphatidate phosphatase activity5.64E-03
61GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.64E-03
62GO:0019900: kinase binding5.64E-03
63GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.55E-03
64GO:0004427: inorganic diphosphatase activity6.67E-03
65GO:0046872: metal ion binding8.12E-03
66GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity8.91E-03
67GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity8.91E-03
68GO:0016887: ATPase activity9.74E-03
69GO:0008889: glycerophosphodiester phosphodiesterase activity1.01E-02
70GO:0004673: protein histidine kinase activity1.27E-02
71GO:0008515: sucrose transmembrane transporter activity1.41E-02
72GO:0008559: xenobiotic-transporting ATPase activity1.41E-02
73GO:0003993: acid phosphatase activity1.50E-02
74GO:0051539: 4 iron, 4 sulfur cluster binding1.64E-02
75GO:0000155: phosphorelay sensor kinase activity1.70E-02
76GO:0004022: alcohol dehydrogenase (NAD) activity1.70E-02
77GO:0031072: heat shock protein binding1.70E-02
78GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.85E-02
79GO:0051119: sugar transmembrane transporter activity2.01E-02
80GO:0004190: aspartic-type endopeptidase activity2.01E-02
81GO:0005515: protein binding2.05E-02
82GO:0008168: methyltransferase activity2.46E-02
83GO:0043424: protein histidine kinase binding2.50E-02
84GO:0005345: purine nucleobase transmembrane transporter activity2.50E-02
85GO:0016788: hydrolase activity, acting on ester bonds2.64E-02
86GO:0008408: 3'-5' exonuclease activity2.68E-02
87GO:0033612: receptor serine/threonine kinase binding2.68E-02
88GO:0015171: amino acid transmembrane transporter activity2.78E-02
89GO:0047134: protein-disulfide reductase activity3.41E-02
90GO:0004812: aminoacyl-tRNA ligase activity3.41E-02
91GO:0008026: ATP-dependent helicase activity3.78E-02
92GO:0001085: RNA polymerase II transcription factor binding3.81E-02
93GO:0004527: exonuclease activity3.81E-02
94GO:0003713: transcription coactivator activity3.81E-02
95GO:0052689: carboxylic ester hydrolase activity3.81E-02
96GO:0004791: thioredoxin-disulfide reductase activity4.01E-02
97GO:0000156: phosphorelay response regulator activity4.85E-02
98GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.85E-02
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Gene type



Gene DE type