GO Enrichment Analysis of Co-expressed Genes with
AT1G75240
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044774: mitotic DNA integrity checkpoint | 0.00E+00 |
| 2 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 3 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 4 | GO:0080127: fruit septum development | 0.00E+00 |
| 5 | GO:0033206: meiotic cytokinesis | 0.00E+00 |
| 6 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 7 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 8 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 9 | GO:0000819: sister chromatid segregation | 0.00E+00 |
| 10 | GO:0042793: transcription from plastid promoter | 5.65E-05 |
| 11 | GO:2000033: regulation of seed dormancy process | 7.89E-05 |
| 12 | GO:0006353: DNA-templated transcription, termination | 1.35E-04 |
| 13 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 1.35E-04 |
| 14 | GO:1903866: palisade mesophyll development | 1.75E-04 |
| 15 | GO:0090063: positive regulation of microtubule nucleation | 1.75E-04 |
| 16 | GO:0042759: long-chain fatty acid biosynthetic process | 1.75E-04 |
| 17 | GO:0034757: negative regulation of iron ion transport | 1.75E-04 |
| 18 | GO:0048016: inositol phosphate-mediated signaling | 1.75E-04 |
| 19 | GO:0010029: regulation of seed germination | 2.48E-04 |
| 20 | GO:0048229: gametophyte development | 3.36E-04 |
| 21 | GO:0010271: regulation of chlorophyll catabolic process | 3.96E-04 |
| 22 | GO:0009662: etioplast organization | 3.96E-04 |
| 23 | GO:1901529: positive regulation of anion channel activity | 3.96E-04 |
| 24 | GO:0033566: gamma-tubulin complex localization | 3.96E-04 |
| 25 | GO:0010569: regulation of double-strand break repair via homologous recombination | 3.96E-04 |
| 26 | GO:0010588: cotyledon vascular tissue pattern formation | 4.39E-04 |
| 27 | GO:0080117: secondary growth | 6.47E-04 |
| 28 | GO:0090391: granum assembly | 6.47E-04 |
| 29 | GO:0006518: peptide metabolic process | 6.47E-04 |
| 30 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 6.47E-04 |
| 31 | GO:0009863: salicylic acid mediated signaling pathway | 6.82E-04 |
| 32 | GO:0010187: negative regulation of seed germination | 6.82E-04 |
| 33 | GO:2000377: regulation of reactive oxygen species metabolic process | 6.82E-04 |
| 34 | GO:0009658: chloroplast organization | 8.79E-04 |
| 35 | GO:0006364: rRNA processing | 8.98E-04 |
| 36 | GO:0009558: embryo sac cellularization | 9.23E-04 |
| 37 | GO:0010371: regulation of gibberellin biosynthetic process | 9.23E-04 |
| 38 | GO:0009102: biotin biosynthetic process | 9.23E-04 |
| 39 | GO:0007276: gamete generation | 9.23E-04 |
| 40 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 9.23E-04 |
| 41 | GO:0042127: regulation of cell proliferation | 1.06E-03 |
| 42 | GO:0006808: regulation of nitrogen utilization | 1.22E-03 |
| 43 | GO:0006479: protein methylation | 1.22E-03 |
| 44 | GO:1900864: mitochondrial RNA modification | 1.22E-03 |
| 45 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.22E-03 |
| 46 | GO:0010501: RNA secondary structure unwinding | 1.23E-03 |
| 47 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.27E-03 |
| 48 | GO:0009740: gibberellic acid mediated signaling pathway | 1.29E-03 |
| 49 | GO:0016120: carotene biosynthetic process | 1.56E-03 |
| 50 | GO:0016558: protein import into peroxisome matrix | 1.56E-03 |
| 51 | GO:0016123: xanthophyll biosynthetic process | 1.56E-03 |
| 52 | GO:0032957: inositol trisphosphate metabolic process | 1.56E-03 |
| 53 | GO:0010583: response to cyclopentenone | 1.73E-03 |
| 54 | GO:0046855: inositol phosphate dephosphorylation | 1.91E-03 |
| 55 | GO:0048831: regulation of shoot system development | 1.91E-03 |
| 56 | GO:0003006: developmental process involved in reproduction | 1.91E-03 |
| 57 | GO:0009643: photosynthetic acclimation | 1.91E-03 |
| 58 | GO:0016554: cytidine to uridine editing | 1.91E-03 |
| 59 | GO:0042176: regulation of protein catabolic process | 1.91E-03 |
| 60 | GO:0048509: regulation of meristem development | 2.30E-03 |
| 61 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.30E-03 |
| 62 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.30E-03 |
| 63 | GO:0000911: cytokinesis by cell plate formation | 2.30E-03 |
| 64 | GO:0010067: procambium histogenesis | 2.30E-03 |
| 65 | GO:0000082: G1/S transition of mitotic cell cycle | 2.70E-03 |
| 66 | GO:0010444: guard mother cell differentiation | 2.70E-03 |
| 67 | GO:0010103: stomatal complex morphogenesis | 2.70E-03 |
| 68 | GO:0000712: resolution of meiotic recombination intermediates | 2.70E-03 |
| 69 | GO:0006401: RNA catabolic process | 2.70E-03 |
| 70 | GO:0006955: immune response | 2.70E-03 |
| 71 | GO:0030497: fatty acid elongation | 2.70E-03 |
| 72 | GO:0006355: regulation of transcription, DNA-templated | 3.02E-03 |
| 73 | GO:0042255: ribosome assembly | 3.13E-03 |
| 74 | GO:0006402: mRNA catabolic process | 3.13E-03 |
| 75 | GO:0010492: maintenance of shoot apical meristem identity | 3.13E-03 |
| 76 | GO:0009642: response to light intensity | 3.13E-03 |
| 77 | GO:0010218: response to far red light | 3.35E-03 |
| 78 | GO:0010233: phloem transport | 3.58E-03 |
| 79 | GO:0048574: long-day photoperiodism, flowering | 3.58E-03 |
| 80 | GO:0010100: negative regulation of photomorphogenesis | 3.58E-03 |
| 81 | GO:0032544: plastid translation | 3.58E-03 |
| 82 | GO:0009827: plant-type cell wall modification | 3.58E-03 |
| 83 | GO:0009867: jasmonic acid mediated signaling pathway | 3.84E-03 |
| 84 | GO:0048507: meristem development | 4.05E-03 |
| 85 | GO:0048589: developmental growth | 4.05E-03 |
| 86 | GO:0030001: metal ion transport | 4.38E-03 |
| 87 | GO:0031425: chloroplast RNA processing | 4.54E-03 |
| 88 | GO:0006349: regulation of gene expression by genetic imprinting | 4.54E-03 |
| 89 | GO:1900865: chloroplast RNA modification | 4.54E-03 |
| 90 | GO:0009744: response to sucrose | 4.95E-03 |
| 91 | GO:0006351: transcription, DNA-templated | 4.97E-03 |
| 92 | GO:0006535: cysteine biosynthetic process from serine | 5.05E-03 |
| 93 | GO:0048829: root cap development | 5.05E-03 |
| 94 | GO:0006949: syncytium formation | 5.05E-03 |
| 95 | GO:0006259: DNA metabolic process | 5.05E-03 |
| 96 | GO:0010048: vernalization response | 5.05E-03 |
| 97 | GO:0006265: DNA topological change | 5.58E-03 |
| 98 | GO:0009750: response to fructose | 5.58E-03 |
| 99 | GO:0048765: root hair cell differentiation | 5.58E-03 |
| 100 | GO:0046856: phosphatidylinositol dephosphorylation | 5.58E-03 |
| 101 | GO:0000038: very long-chain fatty acid metabolic process | 5.58E-03 |
| 102 | GO:0009793: embryo development ending in seed dormancy | 5.81E-03 |
| 103 | GO:0010582: floral meristem determinacy | 6.13E-03 |
| 104 | GO:0010152: pollen maturation | 6.13E-03 |
| 105 | GO:0006312: mitotic recombination | 6.13E-03 |
| 106 | GO:0012501: programmed cell death | 6.13E-03 |
| 107 | GO:0042538: hyperosmotic salinity response | 6.21E-03 |
| 108 | GO:0010102: lateral root morphogenesis | 6.70E-03 |
| 109 | GO:0010020: chloroplast fission | 7.28E-03 |
| 110 | GO:0009887: animal organ morphogenesis | 7.28E-03 |
| 111 | GO:0048467: gynoecium development | 7.28E-03 |
| 112 | GO:0080188: RNA-directed DNA methylation | 7.89E-03 |
| 113 | GO:0010025: wax biosynthetic process | 8.51E-03 |
| 114 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.51E-03 |
| 115 | GO:0019344: cysteine biosynthetic process | 9.15E-03 |
| 116 | GO:0006468: protein phosphorylation | 9.58E-03 |
| 117 | GO:0051726: regulation of cell cycle | 1.01E-02 |
| 118 | GO:0003333: amino acid transmembrane transport | 1.05E-02 |
| 119 | GO:0016998: cell wall macromolecule catabolic process | 1.05E-02 |
| 120 | GO:0010431: seed maturation | 1.05E-02 |
| 121 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.19E-02 |
| 122 | GO:0071215: cellular response to abscisic acid stimulus | 1.19E-02 |
| 123 | GO:0048443: stamen development | 1.26E-02 |
| 124 | GO:0070417: cellular response to cold | 1.33E-02 |
| 125 | GO:0009790: embryo development | 1.39E-02 |
| 126 | GO:0042335: cuticle development | 1.41E-02 |
| 127 | GO:0008033: tRNA processing | 1.41E-02 |
| 128 | GO:0010051: xylem and phloem pattern formation | 1.41E-02 |
| 129 | GO:0010087: phloem or xylem histogenesis | 1.41E-02 |
| 130 | GO:0010305: leaf vascular tissue pattern formation | 1.49E-02 |
| 131 | GO:0009741: response to brassinosteroid | 1.49E-02 |
| 132 | GO:0009960: endosperm development | 1.49E-02 |
| 133 | GO:0007018: microtubule-based movement | 1.56E-02 |
| 134 | GO:0007059: chromosome segregation | 1.56E-02 |
| 135 | GO:0040008: regulation of growth | 1.57E-02 |
| 136 | GO:0009734: auxin-activated signaling pathway | 1.61E-02 |
| 137 | GO:0009749: response to glucose | 1.64E-02 |
| 138 | GO:0045490: pectin catabolic process | 1.65E-02 |
| 139 | GO:0006635: fatty acid beta-oxidation | 1.72E-02 |
| 140 | GO:0032502: developmental process | 1.81E-02 |
| 141 | GO:0009739: response to gibberellin | 1.84E-02 |
| 142 | GO:0010090: trichome morphogenesis | 1.89E-02 |
| 143 | GO:0030163: protein catabolic process | 1.89E-02 |
| 144 | GO:0009828: plant-type cell wall loosening | 1.98E-02 |
| 145 | GO:0019760: glucosinolate metabolic process | 1.98E-02 |
| 146 | GO:0071805: potassium ion transmembrane transport | 2.06E-02 |
| 147 | GO:0000910: cytokinesis | 2.15E-02 |
| 148 | GO:0010027: thylakoid membrane organization | 2.24E-02 |
| 149 | GO:0051301: cell division | 2.40E-02 |
| 150 | GO:0015995: chlorophyll biosynthetic process | 2.52E-02 |
| 151 | GO:0016311: dephosphorylation | 2.61E-02 |
| 152 | GO:0048481: plant ovule development | 2.71E-02 |
| 153 | GO:0006970: response to osmotic stress | 2.75E-02 |
| 154 | GO:0000160: phosphorelay signal transduction system | 2.80E-02 |
| 155 | GO:0007049: cell cycle | 2.85E-02 |
| 156 | GO:0009723: response to ethylene | 2.95E-02 |
| 157 | GO:0006865: amino acid transport | 3.10E-02 |
| 158 | GO:0080167: response to karrikin | 3.16E-02 |
| 159 | GO:0051707: response to other organism | 3.84E-02 |
| 160 | GO:0009965: leaf morphogenesis | 4.17E-02 |
| 161 | GO:0009636: response to toxic substance | 4.17E-02 |
| 162 | GO:0009664: plant-type cell wall organization | 4.51E-02 |
| 163 | GO:0016042: lipid catabolic process | 4.52E-02 |
| 164 | GO:0009737: response to abscisic acid | 4.61E-02 |
| 165 | GO:0009585: red, far-red light phototransduction | 4.74E-02 |
| 166 | GO:0006813: potassium ion transport | 4.74E-02 |
| 167 | GO:0009736: cytokinin-activated signaling pathway | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 2 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 3 | GO:0016274: protein-arginine N-methyltransferase activity | 1.75E-04 |
| 4 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.75E-04 |
| 5 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 1.75E-04 |
| 6 | GO:0042834: peptidoglycan binding | 1.75E-04 |
| 7 | GO:0046030: inositol trisphosphate phosphatase activity | 1.75E-04 |
| 8 | GO:0000989: transcription factor activity, transcription factor binding | 2.06E-04 |
| 9 | GO:0009884: cytokinin receptor activity | 3.96E-04 |
| 10 | GO:0042389: omega-3 fatty acid desaturase activity | 3.96E-04 |
| 11 | GO:0070181: small ribosomal subunit rRNA binding | 6.47E-04 |
| 12 | GO:0005034: osmosensor activity | 6.47E-04 |
| 13 | GO:0009041: uridylate kinase activity | 9.23E-04 |
| 14 | GO:0003916: DNA topoisomerase activity | 9.23E-04 |
| 15 | GO:0030570: pectate lyase activity | 9.77E-04 |
| 16 | GO:0003727: single-stranded RNA binding | 1.06E-03 |
| 17 | GO:0010011: auxin binding | 1.22E-03 |
| 18 | GO:0003723: RNA binding | 1.41E-03 |
| 19 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.91E-03 |
| 20 | GO:0019900: kinase binding | 2.30E-03 |
| 21 | GO:0004124: cysteine synthase activity | 2.30E-03 |
| 22 | GO:0004004: ATP-dependent RNA helicase activity | 2.75E-03 |
| 23 | GO:0004674: protein serine/threonine kinase activity | 3.33E-03 |
| 24 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.58E-03 |
| 25 | GO:0008173: RNA methyltransferase activity | 3.58E-03 |
| 26 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 3.58E-03 |
| 27 | GO:0003697: single-stranded DNA binding | 3.84E-03 |
| 28 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 4.53E-03 |
| 29 | GO:0004673: protein histidine kinase activity | 5.05E-03 |
| 30 | GO:0005524: ATP binding | 5.66E-03 |
| 31 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.13E-03 |
| 32 | GO:0003725: double-stranded RNA binding | 6.70E-03 |
| 33 | GO:0000155: phosphorelay sensor kinase activity | 6.70E-03 |
| 34 | GO:0000175: 3'-5'-exoribonuclease activity | 6.70E-03 |
| 35 | GO:0003690: double-stranded DNA binding | 6.90E-03 |
| 36 | GO:0052689: carboxylic ester hydrolase activity | 7.20E-03 |
| 37 | GO:0003777: microtubule motor activity | 7.38E-03 |
| 38 | GO:0004190: aspartic-type endopeptidase activity | 7.89E-03 |
| 39 | GO:0042803: protein homodimerization activity | 8.46E-03 |
| 40 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 8.51E-03 |
| 41 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 8.51E-03 |
| 42 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 8.51E-03 |
| 43 | GO:0003779: actin binding | 9.21E-03 |
| 44 | GO:0005515: protein binding | 9.23E-03 |
| 45 | GO:0015079: potassium ion transmembrane transporter activity | 9.80E-03 |
| 46 | GO:0043424: protein histidine kinase binding | 9.80E-03 |
| 47 | GO:0043565: sequence-specific DNA binding | 1.01E-02 |
| 48 | GO:0008026: ATP-dependent helicase activity | 1.01E-02 |
| 49 | GO:0008094: DNA-dependent ATPase activity | 1.05E-02 |
| 50 | GO:0019843: rRNA binding | 1.19E-02 |
| 51 | GO:0030170: pyridoxal phosphate binding | 1.32E-02 |
| 52 | GO:0018024: histone-lysine N-methyltransferase activity | 1.33E-02 |
| 53 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.49E-02 |
| 54 | GO:0008289: lipid binding | 1.58E-02 |
| 55 | GO:0019901: protein kinase binding | 1.64E-02 |
| 56 | GO:0008017: microtubule binding | 1.72E-02 |
| 57 | GO:0048038: quinone binding | 1.72E-02 |
| 58 | GO:0003676: nucleic acid binding | 1.77E-02 |
| 59 | GO:0008168: methyltransferase activity | 2.46E-02 |
| 60 | GO:0016301: kinase activity | 2.51E-02 |
| 61 | GO:0016788: hydrolase activity, acting on ester bonds | 2.60E-02 |
| 62 | GO:0004672: protein kinase activity | 2.69E-02 |
| 63 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.90E-02 |
| 64 | GO:0004222: metalloendopeptidase activity | 2.90E-02 |
| 65 | GO:0003993: acid phosphatase activity | 3.31E-02 |
| 66 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.52E-02 |
| 67 | GO:0043621: protein self-association | 4.06E-02 |
| 68 | GO:0015293: symporter activity | 4.17E-02 |
| 69 | GO:0016298: lipase activity | 4.86E-02 |