co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G74590

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0055122: response to very low light intensity stimulus	0.00E+00
2	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
3	GO:0046865: terpenoid transport	0.00E+00
4	GO:0002084: protein depalmitoylation	0.00E+00
5	GO:0032324: molybdopterin cofactor biosynthetic process	0.00E+00
6	GO:0009560: embryo sac egg cell differentiation	0.00E+00
7	GO:0006517: protein deglycosylation	1.02E-05
8	GO:0043967: histone H4 acetylation	2.31E-05
9	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	9.77E-05
10	GO:0071456: cellular response to hypoxia	1.10E-04
11	GO:0071076: RNA 3' uridylation	2.46E-04
12	GO:1990022: RNA polymerase III complex localization to nucleus	2.46E-04
13	GO:0009700: indole phytoalexin biosynthetic process	2.46E-04
14	GO:0010230: alternative respiration	2.46E-04
15	GO:0042868: antisense RNA metabolic process	2.46E-04
16	GO:0002143: tRNA wobble position uridine thiolation	2.46E-04
17	GO:0044376: RNA polymerase II complex import to nucleus	2.46E-04
18	GO:0098789: pre-mRNA cleavage required for polyadenylation	2.46E-04
19	GO:1902065: response to L-glutamate	2.46E-04
20	GO:0043609: regulation of carbon utilization	2.46E-04
21	GO:0031123: RNA 3'-end processing	2.46E-04
22	GO:0042853: L-alanine catabolic process	5.44E-04
23	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	5.44E-04
24	GO:0007584: response to nutrient	5.44E-04
25	GO:0043066: negative regulation of apoptotic process	5.44E-04
26	GO:0051252: regulation of RNA metabolic process	5.44E-04
27	GO:0009156: ribonucleoside monophosphate biosynthetic process	5.44E-04
28	GO:0035335: peptidyl-tyrosine dephosphorylation	5.44E-04
29	GO:0031538: negative regulation of anthocyanin metabolic process	5.44E-04
30	GO:0031204: posttranslational protein targeting to membrane, translocation	5.44E-04
31	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	7.00E-04
32	GO:0042343: indole glucosinolate metabolic process	8.79E-04
33	GO:0010053: root epidermal cell differentiation	8.79E-04
34	GO:0060968: regulation of gene silencing	8.83E-04
35	GO:0031022: nuclear migration along microfilament	8.83E-04
36	GO:0080168: abscisic acid transport	8.83E-04
37	GO:0017006: protein-tetrapyrrole linkage	8.83E-04
38	GO:0006651: diacylglycerol biosynthetic process	8.83E-04
39	GO:0071494: cellular response to UV-C	8.83E-04
40	GO:0015692: lead ion transport	8.83E-04
41	GO:0051707: response to other organism	1.12E-03
42	GO:0009584: detection of visible light	1.26E-03
43	GO:0071329: cellular response to sucrose stimulus	1.26E-03
44	GO:0006516: glycoprotein catabolic process	1.26E-03
45	GO:0002679: respiratory burst involved in defense response	1.26E-03
46	GO:0010731: protein glutathionylation	1.26E-03
47	GO:0006515: misfolded or incompletely synthesized protein catabolic process	1.26E-03
48	GO:0055089: fatty acid homeostasis	1.26E-03
49	GO:0060964: regulation of gene silencing by miRNA	1.26E-03
50	GO:0098542: defense response to other organism	1.30E-03
51	GO:0010363: regulation of plant-type hypersensitive response	1.68E-03
52	GO:0022622: root system development	1.68E-03
53	GO:0010107: potassium ion import	1.68E-03
54	GO:0001709: cell fate determination	1.68E-03
55	GO:0010188: response to microbial phytotoxin	1.68E-03
56	GO:0009902: chloroplast relocation	1.68E-03
57	GO:0009165: nucleotide biosynthetic process	1.68E-03
58	GO:0006952: defense response	2.15E-03
59	GO:0048544: recognition of pollen	2.27E-03
60	GO:0010193: response to ozone	2.61E-03
61	GO:0010256: endomembrane system organization	2.65E-03
62	GO:0031047: gene silencing by RNA	2.78E-03
63	GO:0043966: histone H3 acetylation	3.18E-03
64	GO:2000014: regulation of endosperm development	3.75E-03
65	GO:0006368: transcription elongation from RNA polymerase II promoter	3.75E-03
66	GO:0009627: systemic acquired resistance	4.20E-03
67	GO:0010928: regulation of auxin mediated signaling pathway	4.35E-03
68	GO:0035265: organ growth	4.35E-03
69	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.35E-03
70	GO:0006491: N-glycan processing	4.35E-03
71	GO:1900150: regulation of defense response to fungus	4.35E-03
72	GO:0050821: protein stabilization	4.35E-03
73	GO:0001558: regulation of cell growth	4.98E-03
74	GO:0010120: camalexin biosynthetic process	4.98E-03
75	GO:0006002: fructose 6-phosphate metabolic process	4.98E-03
76	GO:2000024: regulation of leaf development	5.65E-03
77	GO:0010112: regulation of systemic acquired resistance	5.65E-03
78	GO:0048589: developmental growth	5.65E-03
79	GO:0000724: double-strand break repair via homologous recombination	5.94E-03
80	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.33E-03
81	GO:0008202: steroid metabolic process	6.33E-03
82	GO:0043067: regulation of programmed cell death	6.33E-03
83	GO:0009617: response to bacterium	6.41E-03
84	GO:0043069: negative regulation of programmed cell death	7.06E-03
85	GO:0006816: calcium ion transport	7.80E-03
86	GO:0009682: induced systemic resistance	7.80E-03
87	GO:0009089: lysine biosynthetic process via diaminopimelate	7.80E-03
88	GO:0000209: protein polyubiquitination	8.34E-03
89	GO:0008361: regulation of cell size	8.58E-03
90	GO:0009636: response to toxic substance	9.01E-03
91	GO:0006855: drug transmembrane transport	9.36E-03
92	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	9.71E-03
93	GO:0042742: defense response to bacterium	9.79E-03
94	GO:0007034: vacuolar transport	1.02E-02
95	GO:0009809: lignin biosynthetic process	1.08E-02
96	GO:0007030: Golgi organization	1.11E-02
97	GO:0034976: response to endoplasmic reticulum stress	1.20E-02
98	GO:0006636: unsaturated fatty acid biosynthetic process	1.20E-02
99	GO:0006071: glycerol metabolic process	1.20E-02
100	GO:0009863: salicylic acid mediated signaling pathway	1.29E-02
101	GO:0006338: chromatin remodeling	1.29E-02
102	GO:0006289: nucleotide-excision repair	1.29E-02
103	GO:0006487: protein N-linked glycosylation	1.29E-02
104	GO:0009116: nucleoside metabolic process	1.29E-02
105	GO:0044550: secondary metabolite biosynthetic process	1.31E-02
106	GO:0009626: plant-type hypersensitive response	1.37E-02
107	GO:0048278: vesicle docking	1.47E-02
108	GO:0031408: oxylipin biosynthetic process	1.47E-02
109	GO:0006334: nucleosome assembly	1.47E-02
110	GO:0010017: red or far-red light signaling pathway	1.57E-02
111	GO:0009814: defense response, incompatible interaction	1.57E-02
112	GO:0016310: phosphorylation	1.67E-02
113	GO:0009625: response to insect	1.67E-02
114	GO:0006012: galactose metabolic process	1.67E-02
115	GO:0010584: pollen exine formation	1.77E-02
116	GO:0045492: xylan biosynthetic process	1.77E-02
117	GO:0009306: protein secretion	1.77E-02
118	GO:0008284: positive regulation of cell proliferation	1.88E-02
119	GO:0010118: stomatal movement	1.99E-02
120	GO:0009058: biosynthetic process	2.04E-02
121	GO:0009960: endosperm development	2.09E-02
122	GO:0009958: positive gravitropism	2.09E-02
123	GO:0061025: membrane fusion	2.21E-02
124	GO:0042752: regulation of circadian rhythm	2.21E-02
125	GO:0009790: embryo development	2.26E-02
126	GO:0006623: protein targeting to vacuole	2.32E-02
127	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.43E-02
128	GO:0002229: defense response to oomycetes	2.43E-02
129	GO:0000302: response to reactive oxygen species	2.43E-02
130	GO:1901657: glycosyl compound metabolic process	2.67E-02
131	GO:0006904: vesicle docking involved in exocytosis	2.91E-02
132	GO:0007267: cell-cell signaling	2.91E-02
133	GO:0051607: defense response to virus	3.04E-02
134	GO:0001666: response to hypoxia	3.16E-02
135	GO:0009816: defense response to bacterium, incompatible interaction	3.29E-02
136	GO:0007165: signal transduction	3.41E-02
137	GO:0006906: vesicle fusion	3.42E-02
138	GO:0006974: cellular response to DNA damage stimulus	3.42E-02
139	GO:0048573: photoperiodism, flowering	3.55E-02
140	GO:0009817: defense response to fungus, incompatible interaction	3.82E-02
141	GO:0018298: protein-chromophore linkage	3.82E-02
142	GO:0008219: cell death	3.82E-02
143	GO:0006499: N-terminal protein myristoylation	4.10E-02
144	GO:0009407: toxin catabolic process	4.10E-02
145	GO:0010043: response to zinc ion	4.24E-02
146	GO:0045087: innate immune response	4.52E-02
147	GO:0034599: cellular response to oxidative stress	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
2	GO:0061598: molybdopterin adenylyltransferase activity	0.00E+00
3	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
4	GO:0008092: cytoskeletal protein binding	0.00E+00
5	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
6	GO:0050513: glycoprotein 2-beta-D-xylosyltransferase activity	0.00E+00
7	GO:0061599: molybdopterin molybdotransferase activity	0.00E+00
8	GO:0030621: U4 snRNA binding	0.00E+00
9	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
10	GO:0016301: kinase activity	1.37E-04
11	GO:0016621: cinnamoyl-CoA reductase activity	1.77E-04
12	GO:1990188: euchromatin binding	2.46E-04
13	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.46E-04
14	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.46E-04
15	GO:0050265: RNA uridylyltransferase activity	2.46E-04
16	GO:0046027: phospholipid:diacylglycerol acyltransferase activity	2.46E-04
17	GO:0048531: beta-1,3-galactosyltransferase activity	5.44E-04
18	GO:0008428: ribonuclease inhibitor activity	5.44E-04
19	GO:0004338: glucan exo-1,3-beta-glucosidase activity	5.44E-04
20	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	5.44E-04
21	GO:0009883: red or far-red light photoreceptor activity	5.44E-04
22	GO:0051879: Hsp90 protein binding	5.44E-04
23	GO:0031624: ubiquitin conjugating enzyme binding	7.88E-04
24	GO:0008020: G-protein coupled photoreceptor activity	8.83E-04
25	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	8.83E-04
26	GO:0005524: ATP binding	1.04E-03
27	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.26E-03
28	GO:0004792: thiosulfate sulfurtransferase activity	1.26E-03
29	GO:0004749: ribose phosphate diphosphokinase activity	1.26E-03
30	GO:0000993: RNA polymerase II core binding	1.68E-03
31	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.68E-03
32	GO:0009916: alternative oxidase activity	1.68E-03
33	GO:0015368: calcium:cation antiporter activity	1.68E-03
34	GO:0015369: calcium:proton antiporter activity	1.68E-03
35	GO:0008374: O-acyltransferase activity	2.15E-03
36	GO:0008641: small protein activating enzyme activity	2.15E-03
37	GO:0008948: oxaloacetate decarboxylase activity	2.15E-03
38	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.15E-03
39	GO:0042285: xylosyltransferase activity	2.15E-03
40	GO:0030151: molybdenum ion binding	2.15E-03
41	GO:0017070: U6 snRNA binding	2.15E-03
42	GO:0008381: mechanically-gated ion channel activity	2.15E-03
43	GO:0035252: UDP-xylosyltransferase activity	2.65E-03
44	GO:0008474: palmitoyl-(protein) hydrolase activity	2.65E-03
45	GO:0004656: procollagen-proline 4-dioxygenase activity	3.18E-03
46	GO:0008195: phosphatidate phosphatase activity	3.18E-03
47	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.35E-03
48	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.73E-03
49	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.75E-03
50	GO:0009881: photoreceptor activity	3.75E-03
51	GO:0003872: 6-phosphofructokinase activity	3.75E-03
52	GO:0004620: phospholipase activity	3.75E-03
53	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.75E-03
54	GO:0008312: 7S RNA binding	4.35E-03
55	GO:0004034: aldose 1-epimerase activity	4.35E-03
56	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.35E-03
57	GO:0015491: cation:cation antiporter activity	4.35E-03
58	GO:0030247: polysaccharide binding	4.43E-03
59	GO:0030246: carbohydrate binding	4.80E-03
60	GO:0005267: potassium channel activity	4.98E-03
61	GO:0008142: oxysterol binding	4.98E-03
62	GO:0019825: oxygen binding	5.30E-03
63	GO:0004568: chitinase activity	7.06E-03
64	GO:0005543: phospholipid binding	7.80E-03
65	GO:0008559: xenobiotic-transporting ATPase activity	7.80E-03
66	GO:0047372: acylglycerol lipase activity	7.80E-03
67	GO:0008378: galactosyltransferase activity	8.58E-03
68	GO:0000155: phosphorelay sensor kinase activity	9.38E-03
69	GO:0005506: iron ion binding	9.52E-03
70	GO:0043531: ADP binding	1.00E-02
71	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.02E-02
72	GO:0003712: transcription cofactor activity	1.11E-02
73	GO:0004497: monooxygenase activity	1.17E-02
74	GO:0004725: protein tyrosine phosphatase activity	1.20E-02
75	GO:0045735: nutrient reservoir activity	1.28E-02
76	GO:0031418: L-ascorbic acid binding	1.29E-02
77	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.41E-02
78	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.41E-02
79	GO:0035251: UDP-glucosyltransferase activity	1.47E-02
80	GO:0004707: MAP kinase activity	1.47E-02
81	GO:0016779: nucleotidyltransferase activity	1.57E-02
82	GO:0008810: cellulase activity	1.67E-02
83	GO:0003756: protein disulfide isomerase activity	1.77E-02
84	GO:0016758: transferase activity, transferring hexosyl groups	1.89E-02
85	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.99E-02
86	GO:0004402: histone acetyltransferase activity	1.99E-02
87	GO:0030170: pyridoxal phosphate binding	2.15E-02
88	GO:0016853: isomerase activity	2.21E-02
89	GO:0008483: transaminase activity	2.91E-02
90	GO:0008194: UDP-glycosyltransferase activity	2.99E-02
91	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.40E-02
92	GO:0008375: acetylglucosaminyltransferase activity	3.42E-02
93	GO:0102483: scopolin beta-glucosidase activity	3.55E-02
94	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.55E-02
95	GO:0015238: drug transmembrane transporter activity	3.96E-02
96	GO:0030145: manganese ion binding	4.24E-02
97	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.52E-02
98	GO:0008422: beta-glucosidase activity	4.81E-02
99	GO:0000149: SNARE binding	4.81E-02
100	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.81E-02