GO Enrichment Analysis of Co-expressed Genes with
AT1G74040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 3 | GO:0051050: positive regulation of transport | 0.00E+00 |
| 4 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 5 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
| 6 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 7 | GO:0042026: protein refolding | 4.67E-07 |
| 8 | GO:0009790: embryo development | 9.32E-07 |
| 9 | GO:0009793: embryo development ending in seed dormancy | 1.06E-06 |
| 10 | GO:0009657: plastid organization | 1.74E-06 |
| 11 | GO:0009658: chloroplast organization | 5.70E-06 |
| 12 | GO:0042793: transcription from plastid promoter | 3.90E-05 |
| 13 | GO:0006458: 'de novo' protein folding | 5.48E-05 |
| 14 | GO:0006427: histidyl-tRNA aminoacylation | 1.40E-04 |
| 15 | GO:0042659: regulation of cell fate specification | 1.40E-04 |
| 16 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 1.40E-04 |
| 17 | GO:0005980: glycogen catabolic process | 1.40E-04 |
| 18 | GO:0006438: valyl-tRNA aminoacylation | 1.40E-04 |
| 19 | GO:0090558: plant epidermis development | 1.40E-04 |
| 20 | GO:0042371: vitamin K biosynthetic process | 1.40E-04 |
| 21 | GO:0035987: endodermal cell differentiation | 1.40E-04 |
| 22 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.40E-04 |
| 23 | GO:0006419: alanyl-tRNA aminoacylation | 1.40E-04 |
| 24 | GO:0045037: protein import into chloroplast stroma | 2.81E-04 |
| 25 | GO:0009451: RNA modification | 2.83E-04 |
| 26 | GO:0006739: NADP metabolic process | 3.20E-04 |
| 27 | GO:0060359: response to ammonium ion | 3.20E-04 |
| 28 | GO:0048255: mRNA stabilization | 3.20E-04 |
| 29 | GO:0015712: hexose phosphate transport | 3.20E-04 |
| 30 | GO:1900871: chloroplast mRNA modification | 3.20E-04 |
| 31 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 3.20E-04 |
| 32 | GO:0001682: tRNA 5'-leader removal | 3.20E-04 |
| 33 | GO:0006420: arginyl-tRNA aminoacylation | 3.20E-04 |
| 34 | GO:0010020: chloroplast fission | 3.63E-04 |
| 35 | GO:0006508: proteolysis | 4.93E-04 |
| 36 | GO:0090708: specification of plant organ axis polarity | 5.26E-04 |
| 37 | GO:0035436: triose phosphate transmembrane transport | 5.26E-04 |
| 38 | GO:0042780: tRNA 3'-end processing | 5.26E-04 |
| 39 | GO:0001578: microtubule bundle formation | 5.26E-04 |
| 40 | GO:0043157: response to cation stress | 5.26E-04 |
| 41 | GO:0005977: glycogen metabolic process | 5.26E-04 |
| 42 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 5.26E-04 |
| 43 | GO:0006418: tRNA aminoacylation for protein translation | 5.53E-04 |
| 44 | GO:0061077: chaperone-mediated protein folding | 6.07E-04 |
| 45 | GO:0007005: mitochondrion organization | 6.63E-04 |
| 46 | GO:0006164: purine nucleotide biosynthetic process | 7.53E-04 |
| 47 | GO:0016556: mRNA modification | 7.53E-04 |
| 48 | GO:0008615: pyridoxine biosynthetic process | 7.53E-04 |
| 49 | GO:0051289: protein homotetramerization | 7.53E-04 |
| 50 | GO:2001141: regulation of RNA biosynthetic process | 7.53E-04 |
| 51 | GO:0051085: chaperone mediated protein folding requiring cofactor | 7.53E-04 |
| 52 | GO:0051322: anaphase | 9.98E-04 |
| 53 | GO:0015713: phosphoglycerate transport | 9.98E-04 |
| 54 | GO:0030104: water homeostasis | 9.98E-04 |
| 55 | GO:0006734: NADH metabolic process | 9.98E-04 |
| 56 | GO:0044205: 'de novo' UMP biosynthetic process | 9.98E-04 |
| 57 | GO:0010021: amylopectin biosynthetic process | 9.98E-04 |
| 58 | GO:0019252: starch biosynthetic process | 1.12E-03 |
| 59 | GO:0010236: plastoquinone biosynthetic process | 1.26E-03 |
| 60 | GO:0010583: response to cyclopentenone | 1.27E-03 |
| 61 | GO:0009630: gravitropism | 1.27E-03 |
| 62 | GO:0009959: negative gravitropism | 1.55E-03 |
| 63 | GO:0010027: thylakoid membrane organization | 1.71E-03 |
| 64 | GO:0042372: phylloquinone biosynthetic process | 1.86E-03 |
| 65 | GO:0009942: longitudinal axis specification | 1.86E-03 |
| 66 | GO:2000067: regulation of root morphogenesis | 1.86E-03 |
| 67 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 2.18E-03 |
| 68 | GO:0010444: guard mother cell differentiation | 2.18E-03 |
| 69 | GO:0006400: tRNA modification | 2.18E-03 |
| 70 | GO:0009772: photosynthetic electron transport in photosystem II | 2.18E-03 |
| 71 | GO:0048564: photosystem I assembly | 2.52E-03 |
| 72 | GO:0006353: DNA-templated transcription, termination | 2.52E-03 |
| 73 | GO:0070413: trehalose metabolism in response to stress | 2.52E-03 |
| 74 | GO:0055075: potassium ion homeostasis | 2.52E-03 |
| 75 | GO:0071482: cellular response to light stimulus | 2.88E-03 |
| 76 | GO:0007389: pattern specification process | 2.88E-03 |
| 77 | GO:0006098: pentose-phosphate shunt | 3.26E-03 |
| 78 | GO:0000373: Group II intron splicing | 3.26E-03 |
| 79 | GO:0010114: response to red light | 3.61E-03 |
| 80 | GO:1900865: chloroplast RNA modification | 3.65E-03 |
| 81 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 3.65E-03 |
| 82 | GO:2000280: regulation of root development | 3.65E-03 |
| 83 | GO:0006259: DNA metabolic process | 4.06E-03 |
| 84 | GO:0006265: DNA topological change | 4.48E-03 |
| 85 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.48E-03 |
| 86 | GO:0006352: DNA-templated transcription, initiation | 4.48E-03 |
| 87 | GO:0010015: root morphogenesis | 4.48E-03 |
| 88 | GO:0006457: protein folding | 4.75E-03 |
| 89 | GO:0005983: starch catabolic process | 4.92E-03 |
| 90 | GO:0050826: response to freezing | 5.37E-03 |
| 91 | GO:0006094: gluconeogenesis | 5.37E-03 |
| 92 | GO:0010207: photosystem II assembly | 5.84E-03 |
| 93 | GO:0090351: seedling development | 6.32E-03 |
| 94 | GO:0006833: water transport | 6.81E-03 |
| 95 | GO:0005992: trehalose biosynthetic process | 7.32E-03 |
| 96 | GO:0009116: nucleoside metabolic process | 7.32E-03 |
| 97 | GO:0019953: sexual reproduction | 7.84E-03 |
| 98 | GO:0051302: regulation of cell division | 7.84E-03 |
| 99 | GO:0015992: proton transport | 8.38E-03 |
| 100 | GO:0006730: one-carbon metabolic process | 8.92E-03 |
| 101 | GO:0016226: iron-sulfur cluster assembly | 8.92E-03 |
| 102 | GO:0009306: protein secretion | 1.01E-02 |
| 103 | GO:0006633: fatty acid biosynthetic process | 1.09E-02 |
| 104 | GO:0000226: microtubule cytoskeleton organization | 1.12E-02 |
| 105 | GO:0008033: tRNA processing | 1.12E-02 |
| 106 | GO:0006662: glycerol ether metabolic process | 1.18E-02 |
| 107 | GO:0048868: pollen tube development | 1.18E-02 |
| 108 | GO:0048544: recognition of pollen | 1.25E-02 |
| 109 | GO:0007059: chromosome segregation | 1.25E-02 |
| 110 | GO:0009851: auxin biosynthetic process | 1.31E-02 |
| 111 | GO:0009416: response to light stimulus | 1.44E-02 |
| 112 | GO:0009409: response to cold | 1.48E-02 |
| 113 | GO:0010252: auxin homeostasis | 1.58E-02 |
| 114 | GO:0009828: plant-type cell wall loosening | 1.58E-02 |
| 115 | GO:0000910: cytokinesis | 1.71E-02 |
| 116 | GO:0001666: response to hypoxia | 1.79E-02 |
| 117 | GO:0009627: systemic acquired resistance | 1.93E-02 |
| 118 | GO:0015995: chlorophyll biosynthetic process | 2.00E-02 |
| 119 | GO:0048481: plant ovule development | 2.16E-02 |
| 120 | GO:0008219: cell death | 2.16E-02 |
| 121 | GO:0000160: phosphorelay signal transduction system | 2.23E-02 |
| 122 | GO:0006865: amino acid transport | 2.47E-02 |
| 123 | GO:0009853: photorespiration | 2.55E-02 |
| 124 | GO:0009637: response to blue light | 2.55E-02 |
| 125 | GO:0015979: photosynthesis | 2.62E-02 |
| 126 | GO:0034599: cellular response to oxidative stress | 2.63E-02 |
| 127 | GO:0009926: auxin polar transport | 3.06E-02 |
| 128 | GO:0006812: cation transport | 3.59E-02 |
| 129 | GO:0009664: plant-type cell wall organization | 3.59E-02 |
| 130 | GO:0006364: rRNA processing | 3.78E-02 |
| 131 | GO:0009736: cytokinin-activated signaling pathway | 3.78E-02 |
| 132 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.87E-02 |
| 133 | GO:0006096: glycolytic process | 4.26E-02 |
| 134 | GO:0048316: seed development | 4.35E-02 |
| 135 | GO:0009553: embryo sac development | 4.75E-02 |
| 136 | GO:0009734: auxin-activated signaling pathway | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 2 | GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0051060: pullulanase activity | 0.00E+00 |
| 5 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 6 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 7 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 8 | GO:0070009: serine-type aminopeptidase activity | 0.00E+00 |
| 9 | GO:0003937: IMP cyclohydrolase activity | 0.00E+00 |
| 10 | GO:0044183: protein binding involved in protein folding | 6.24E-08 |
| 11 | GO:0004176: ATP-dependent peptidase activity | 5.64E-07 |
| 12 | GO:0008237: metallopeptidase activity | 5.02E-06 |
| 13 | GO:0004556: alpha-amylase activity | 3.90E-05 |
| 14 | GO:0008184: glycogen phosphorylase activity | 1.40E-04 |
| 15 | GO:0004813: alanine-tRNA ligase activity | 1.40E-04 |
| 16 | GO:0052856: NADHX epimerase activity | 1.40E-04 |
| 17 | GO:0004645: phosphorylase activity | 1.40E-04 |
| 18 | GO:0004821: histidine-tRNA ligase activity | 1.40E-04 |
| 19 | GO:0004832: valine-tRNA ligase activity | 1.40E-04 |
| 20 | GO:0052857: NADPHX epimerase activity | 1.40E-04 |
| 21 | GO:0004830: tryptophan-tRNA ligase activity | 1.40E-04 |
| 22 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 1.40E-04 |
| 23 | GO:0005227: calcium activated cation channel activity | 1.40E-04 |
| 24 | GO:0004733: pyridoxamine-phosphate oxidase activity | 1.40E-04 |
| 25 | GO:0004222: metalloendopeptidase activity | 2.46E-04 |
| 26 | GO:0004519: endonuclease activity | 2.86E-04 |
| 27 | GO:0019156: isoamylase activity | 3.20E-04 |
| 28 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.20E-04 |
| 29 | GO:0004814: arginine-tRNA ligase activity | 3.20E-04 |
| 30 | GO:0004047: aminomethyltransferase activity | 3.20E-04 |
| 31 | GO:0046524: sucrose-phosphate synthase activity | 5.26E-04 |
| 32 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 5.26E-04 |
| 33 | GO:0071917: triose-phosphate transmembrane transporter activity | 5.26E-04 |
| 34 | GO:0005524: ATP binding | 7.01E-04 |
| 35 | GO:0016851: magnesium chelatase activity | 7.53E-04 |
| 36 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 7.53E-04 |
| 37 | GO:0004812: aminoacyl-tRNA ligase activity | 8.45E-04 |
| 38 | GO:0051082: unfolded protein binding | 9.38E-04 |
| 39 | GO:0016987: sigma factor activity | 9.98E-04 |
| 40 | GO:0015120: phosphoglycerate transmembrane transporter activity | 9.98E-04 |
| 41 | GO:0004659: prenyltransferase activity | 9.98E-04 |
| 42 | GO:0001053: plastid sigma factor activity | 9.98E-04 |
| 43 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.26E-03 |
| 44 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.26E-03 |
| 45 | GO:0005275: amine transmembrane transporter activity | 1.26E-03 |
| 46 | GO:0004526: ribonuclease P activity | 1.55E-03 |
| 47 | GO:0004332: fructose-bisphosphate aldolase activity | 1.55E-03 |
| 48 | GO:0016597: amino acid binding | 1.62E-03 |
| 49 | GO:0003723: RNA binding | 1.63E-03 |
| 50 | GO:0008195: phosphatidate phosphatase activity | 1.86E-03 |
| 51 | GO:0004427: inorganic diphosphatase activity | 2.18E-03 |
| 52 | GO:0016887: ATPase activity | 2.61E-03 |
| 53 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.88E-03 |
| 54 | GO:0009672: auxin:proton symporter activity | 3.65E-03 |
| 55 | GO:0043621: protein self-association | 3.90E-03 |
| 56 | GO:0004805: trehalose-phosphatase activity | 4.06E-03 |
| 57 | GO:0000049: tRNA binding | 4.92E-03 |
| 58 | GO:0004565: beta-galactosidase activity | 5.37E-03 |
| 59 | GO:0010329: auxin efflux transmembrane transporter activity | 5.37E-03 |
| 60 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 6.81E-03 |
| 61 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 6.81E-03 |
| 62 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 6.81E-03 |
| 63 | GO:0003924: GTPase activity | 6.93E-03 |
| 64 | GO:0008408: 3'-5' exonuclease activity | 8.38E-03 |
| 65 | GO:0030170: pyridoxal phosphate binding | 9.59E-03 |
| 66 | GO:0008565: protein transporter activity | 1.03E-02 |
| 67 | GO:0047134: protein-disulfide reductase activity | 1.06E-02 |
| 68 | GO:0004527: exonuclease activity | 1.18E-02 |
| 69 | GO:0010181: FMN binding | 1.25E-02 |
| 70 | GO:0005355: glucose transmembrane transporter activity | 1.25E-02 |
| 71 | GO:0004791: thioredoxin-disulfide reductase activity | 1.25E-02 |
| 72 | GO:0000156: phosphorelay response regulator activity | 1.51E-02 |
| 73 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.51E-02 |
| 74 | GO:0016791: phosphatase activity | 1.58E-02 |
| 75 | GO:0008483: transaminase activity | 1.64E-02 |
| 76 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.64E-02 |
| 77 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.16E-02 |
| 78 | GO:0030145: manganese ion binding | 2.39E-02 |
| 79 | GO:0003993: acid phosphatase activity | 2.63E-02 |
| 80 | GO:0005525: GTP binding | 2.69E-02 |
| 81 | GO:0004185: serine-type carboxypeptidase activity | 3.06E-02 |
| 82 | GO:0005198: structural molecule activity | 3.32E-02 |
| 83 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.78E-02 |
| 84 | GO:0015171: amino acid transmembrane transporter activity | 4.06E-02 |
| 85 | GO:0045735: nutrient reservoir activity | 4.26E-02 |
| 86 | GO:0015035: protein disulfide oxidoreductase activity | 4.95E-02 |