GO Enrichment Analysis of Co-expressed Genes with
AT1G73660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 2 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 3 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 4 | GO:0071000: response to magnetism | 0.00E+00 |
| 5 | GO:0010412: mannan metabolic process | 0.00E+00 |
| 6 | GO:0071311: cellular response to acetate | 0.00E+00 |
| 7 | GO:0015843: methylammonium transport | 0.00E+00 |
| 8 | GO:0071260: cellular response to mechanical stimulus | 0.00E+00 |
| 9 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 10 | GO:0009638: phototropism | 7.00E-07 |
| 11 | GO:0009082: branched-chain amino acid biosynthetic process | 1.91E-05 |
| 12 | GO:0009099: valine biosynthetic process | 1.91E-05 |
| 13 | GO:0009097: isoleucine biosynthetic process | 4.37E-05 |
| 14 | GO:0071028: nuclear mRNA surveillance | 7.23E-05 |
| 15 | GO:0072387: flavin adenine dinucleotide metabolic process | 7.23E-05 |
| 16 | GO:0006264: mitochondrial DNA replication | 7.23E-05 |
| 17 | GO:0033259: plastid DNA replication | 7.23E-05 |
| 18 | GO:0006177: GMP biosynthetic process | 7.23E-05 |
| 19 | GO:0010450: inflorescence meristem growth | 7.23E-05 |
| 20 | GO:0034475: U4 snRNA 3'-end processing | 1.74E-04 |
| 21 | GO:1901529: positive regulation of anion channel activity | 1.74E-04 |
| 22 | GO:0080175: phragmoplast microtubule organization | 1.74E-04 |
| 23 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.74E-04 |
| 24 | GO:0010617: circadian regulation of calcium ion oscillation | 1.74E-04 |
| 25 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 1.74E-04 |
| 26 | GO:0099402: plant organ development | 1.74E-04 |
| 27 | GO:0031125: rRNA 3'-end processing | 1.74E-04 |
| 28 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 1.74E-04 |
| 29 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.74E-04 |
| 30 | GO:0009585: red, far-red light phototransduction | 1.89E-04 |
| 31 | GO:0016075: rRNA catabolic process | 2.93E-04 |
| 32 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 2.93E-04 |
| 33 | GO:0051127: positive regulation of actin nucleation | 2.93E-04 |
| 34 | GO:1902448: positive regulation of shade avoidance | 2.93E-04 |
| 35 | GO:1901672: positive regulation of systemic acquired resistance | 2.93E-04 |
| 36 | GO:0071230: cellular response to amino acid stimulus | 2.93E-04 |
| 37 | GO:0045165: cell fate commitment | 2.93E-04 |
| 38 | GO:0006164: purine nucleotide biosynthetic process | 4.23E-04 |
| 39 | GO:0015696: ammonium transport | 4.23E-04 |
| 40 | GO:1901332: negative regulation of lateral root development | 4.23E-04 |
| 41 | GO:0046836: glycolipid transport | 4.23E-04 |
| 42 | GO:0046355: mannan catabolic process | 5.65E-04 |
| 43 | GO:0072488: ammonium transmembrane transport | 5.65E-04 |
| 44 | GO:1902347: response to strigolactone | 5.65E-04 |
| 45 | GO:0009165: nucleotide biosynthetic process | 5.65E-04 |
| 46 | GO:0010158: abaxial cell fate specification | 7.14E-04 |
| 47 | GO:0046785: microtubule polymerization | 7.14E-04 |
| 48 | GO:0010117: photoprotection | 7.14E-04 |
| 49 | GO:0046283: anthocyanin-containing compound metabolic process | 7.14E-04 |
| 50 | GO:1902183: regulation of shoot apical meristem development | 7.14E-04 |
| 51 | GO:0051225: spindle assembly | 7.14E-04 |
| 52 | GO:1901371: regulation of leaf morphogenesis | 8.73E-04 |
| 53 | GO:0060918: auxin transport | 8.73E-04 |
| 54 | GO:0006139: nucleobase-containing compound metabolic process | 8.73E-04 |
| 55 | GO:0009117: nucleotide metabolic process | 8.73E-04 |
| 56 | GO:0009635: response to herbicide | 8.73E-04 |
| 57 | GO:0006561: proline biosynthetic process | 8.73E-04 |
| 58 | GO:0009959: negative gravitropism | 8.73E-04 |
| 59 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.04E-03 |
| 60 | GO:0042372: phylloquinone biosynthetic process | 1.04E-03 |
| 61 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.04E-03 |
| 62 | GO:0010444: guard mother cell differentiation | 1.21E-03 |
| 63 | GO:0051510: regulation of unidimensional cell growth | 1.21E-03 |
| 64 | GO:0010161: red light signaling pathway | 1.21E-03 |
| 65 | GO:0010100: negative regulation of photomorphogenesis | 1.59E-03 |
| 66 | GO:0006997: nucleus organization | 1.59E-03 |
| 67 | GO:0010093: specification of floral organ identity | 1.59E-03 |
| 68 | GO:0010099: regulation of photomorphogenesis | 1.59E-03 |
| 69 | GO:2000024: regulation of leaf development | 1.80E-03 |
| 70 | GO:0006783: heme biosynthetic process | 1.80E-03 |
| 71 | GO:0006189: 'de novo' IMP biosynthetic process | 1.80E-03 |
| 72 | GO:0009098: leucine biosynthetic process | 2.01E-03 |
| 73 | GO:0010018: far-red light signaling pathway | 2.01E-03 |
| 74 | GO:1900426: positive regulation of defense response to bacterium | 2.01E-03 |
| 75 | GO:0009299: mRNA transcription | 2.23E-03 |
| 76 | GO:0009688: abscisic acid biosynthetic process | 2.23E-03 |
| 77 | GO:0006816: calcium ion transport | 2.46E-03 |
| 78 | GO:0009750: response to fructose | 2.46E-03 |
| 79 | GO:0009740: gibberellic acid mediated signaling pathway | 2.70E-03 |
| 80 | GO:0009624: response to nematode | 2.86E-03 |
| 81 | GO:0009785: blue light signaling pathway | 2.94E-03 |
| 82 | GO:0030036: actin cytoskeleton organization | 2.94E-03 |
| 83 | GO:0010075: regulation of meristem growth | 2.94E-03 |
| 84 | GO:0009725: response to hormone | 2.94E-03 |
| 85 | GO:0009742: brassinosteroid mediated signaling pathway | 3.03E-03 |
| 86 | GO:0009933: meristem structural organization | 3.19E-03 |
| 87 | GO:0090351: seedling development | 3.44E-03 |
| 88 | GO:0010030: positive regulation of seed germination | 3.44E-03 |
| 89 | GO:0042753: positive regulation of circadian rhythm | 3.71E-03 |
| 90 | GO:0007010: cytoskeleton organization | 3.98E-03 |
| 91 | GO:0010187: negative regulation of seed germination | 3.98E-03 |
| 92 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.98E-03 |
| 93 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.98E-03 |
| 94 | GO:0005992: trehalose biosynthetic process | 3.98E-03 |
| 95 | GO:0009735: response to cytokinin | 4.14E-03 |
| 96 | GO:0006874: cellular calcium ion homeostasis | 4.26E-03 |
| 97 | GO:0009416: response to light stimulus | 4.63E-03 |
| 98 | GO:0010017: red or far-red light signaling pathway | 4.83E-03 |
| 99 | GO:0035428: hexose transmembrane transport | 4.83E-03 |
| 100 | GO:0007623: circadian rhythm | 4.91E-03 |
| 101 | GO:0009686: gibberellin biosynthetic process | 5.13E-03 |
| 102 | GO:0019722: calcium-mediated signaling | 5.43E-03 |
| 103 | GO:0042127: regulation of cell proliferation | 5.43E-03 |
| 104 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 5.74E-03 |
| 105 | GO:0070417: cellular response to cold | 5.74E-03 |
| 106 | GO:0042631: cellular response to water deprivation | 6.05E-03 |
| 107 | GO:0034220: ion transmembrane transport | 6.05E-03 |
| 108 | GO:0010118: stomatal movement | 6.05E-03 |
| 109 | GO:0010154: fruit development | 6.38E-03 |
| 110 | GO:0010182: sugar mediated signaling pathway | 6.38E-03 |
| 111 | GO:0046323: glucose import | 6.38E-03 |
| 112 | GO:0042752: regulation of circadian rhythm | 6.70E-03 |
| 113 | GO:0009646: response to absence of light | 6.70E-03 |
| 114 | GO:0009826: unidimensional cell growth | 7.31E-03 |
| 115 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 7.38E-03 |
| 116 | GO:0010583: response to cyclopentenone | 7.72E-03 |
| 117 | GO:0010090: trichome morphogenesis | 8.07E-03 |
| 118 | GO:0009639: response to red or far red light | 8.43E-03 |
| 119 | GO:0016310: phosphorylation | 9.39E-03 |
| 120 | GO:0016126: sterol biosynthetic process | 9.54E-03 |
| 121 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.74E-03 |
| 122 | GO:0010029: regulation of seed germination | 9.92E-03 |
| 123 | GO:0046777: protein autophosphorylation | 1.01E-02 |
| 124 | GO:0015995: chlorophyll biosynthetic process | 1.07E-02 |
| 125 | GO:0030244: cellulose biosynthetic process | 1.15E-02 |
| 126 | GO:0018298: protein-chromophore linkage | 1.15E-02 |
| 127 | GO:0000160: phosphorelay signal transduction system | 1.19E-02 |
| 128 | GO:0010218: response to far red light | 1.23E-02 |
| 129 | GO:0009637: response to blue light | 1.36E-02 |
| 130 | GO:0006631: fatty acid metabolic process | 1.54E-02 |
| 131 | GO:0009640: photomorphogenesis | 1.63E-02 |
| 132 | GO:0010114: response to red light | 1.63E-02 |
| 133 | GO:0009644: response to high light intensity | 1.72E-02 |
| 134 | GO:0006260: DNA replication | 1.86E-02 |
| 135 | GO:0009664: plant-type cell wall organization | 1.91E-02 |
| 136 | GO:0009736: cytokinin-activated signaling pathway | 2.01E-02 |
| 137 | GO:0009909: regulation of flower development | 2.16E-02 |
| 138 | GO:0048316: seed development | 2.31E-02 |
| 139 | GO:0006396: RNA processing | 2.64E-02 |
| 140 | GO:0051726: regulation of cell cycle | 2.69E-02 |
| 141 | GO:0051301: cell division | 2.70E-02 |
| 142 | GO:0009845: seed germination | 3.20E-02 |
| 143 | GO:0040008: regulation of growth | 3.69E-02 |
| 144 | GO:0045490: pectin catabolic process | 3.81E-02 |
| 145 | GO:0009414: response to water deprivation | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 3 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 4 | GO:0015276: ligand-gated ion channel activity | 0.00E+00 |
| 5 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 6 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 7 | GO:0008066: glutamate receptor activity | 7.23E-05 |
| 8 | GO:0010313: phytochrome binding | 7.23E-05 |
| 9 | GO:0003984: acetolactate synthase activity | 7.23E-05 |
| 10 | GO:0050139: nicotinate-N-glucosyltransferase activity | 7.23E-05 |
| 11 | GO:0043425: bHLH transcription factor binding | 1.74E-04 |
| 12 | GO:0003938: IMP dehydrogenase activity | 1.74E-04 |
| 13 | GO:0000254: C-4 methylsterol oxidase activity | 4.23E-04 |
| 14 | GO:0035529: NADH pyrophosphatase activity | 4.23E-04 |
| 15 | GO:0052656: L-isoleucine transaminase activity | 4.23E-04 |
| 16 | GO:0009882: blue light photoreceptor activity | 4.23E-04 |
| 17 | GO:0052654: L-leucine transaminase activity | 4.23E-04 |
| 18 | GO:0052655: L-valine transaminase activity | 4.23E-04 |
| 19 | GO:0017089: glycolipid transporter activity | 4.23E-04 |
| 20 | GO:0004084: branched-chain-amino-acid transaminase activity | 5.65E-04 |
| 21 | GO:0004737: pyruvate decarboxylase activity | 5.65E-04 |
| 22 | GO:0008409: 5'-3' exonuclease activity | 5.65E-04 |
| 23 | GO:0051861: glycolipid binding | 5.65E-04 |
| 24 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 5.65E-04 |
| 25 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.14E-04 |
| 26 | GO:0016208: AMP binding | 8.73E-04 |
| 27 | GO:0016462: pyrophosphatase activity | 8.73E-04 |
| 28 | GO:0008519: ammonium transmembrane transporter activity | 8.73E-04 |
| 29 | GO:0030976: thiamine pyrophosphate binding | 8.73E-04 |
| 30 | GO:0071949: FAD binding | 1.80E-03 |
| 31 | GO:0004864: protein phosphatase inhibitor activity | 2.23E-03 |
| 32 | GO:0004805: trehalose-phosphatase activity | 2.23E-03 |
| 33 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.46E-03 |
| 34 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.46E-03 |
| 35 | GO:0000175: 3'-5'-exoribonuclease activity | 2.94E-03 |
| 36 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.94E-03 |
| 37 | GO:0005262: calcium channel activity | 2.94E-03 |
| 38 | GO:0008131: primary amine oxidase activity | 3.19E-03 |
| 39 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.19E-03 |
| 40 | GO:0005217: intracellular ligand-gated ion channel activity | 3.44E-03 |
| 41 | GO:0004970: ionotropic glutamate receptor activity | 3.44E-03 |
| 42 | GO:0003887: DNA-directed DNA polymerase activity | 3.71E-03 |
| 43 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 4.54E-03 |
| 44 | GO:0008408: 3'-5' exonuclease activity | 4.54E-03 |
| 45 | GO:0030570: pectate lyase activity | 5.13E-03 |
| 46 | GO:0008017: microtubule binding | 5.14E-03 |
| 47 | GO:0003727: single-stranded RNA binding | 5.43E-03 |
| 48 | GO:0042802: identical protein binding | 6.23E-03 |
| 49 | GO:0005515: protein binding | 6.29E-03 |
| 50 | GO:0010181: FMN binding | 6.70E-03 |
| 51 | GO:0005355: glucose transmembrane transporter activity | 6.70E-03 |
| 52 | GO:0004872: receptor activity | 7.04E-03 |
| 53 | GO:0000156: phosphorelay response regulator activity | 8.07E-03 |
| 54 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 9.25E-03 |
| 55 | GO:0004871: signal transducer activity | 1.18E-02 |
| 56 | GO:0042803: protein homodimerization activity | 1.18E-02 |
| 57 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.23E-02 |
| 58 | GO:0003824: catalytic activity | 1.28E-02 |
| 59 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.72E-02 |
| 60 | GO:0046872: metal ion binding | 1.96E-02 |
| 61 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.42E-02 |
| 62 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.42E-02 |
| 63 | GO:0016874: ligase activity | 2.47E-02 |
| 64 | GO:0003779: actin binding | 2.53E-02 |
| 65 | GO:0015035: protein disulfide oxidoreductase activity | 2.64E-02 |
| 66 | GO:0016829: lyase activity | 3.20E-02 |
| 67 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.27E-02 |
| 68 | GO:0015144: carbohydrate transmembrane transporter activity | 3.44E-02 |
| 69 | GO:0005351: sugar:proton symporter activity | 3.75E-02 |
| 70 | GO:0008194: UDP-glycosyltransferase activity | 4.13E-02 |
| 71 | GO:0044212: transcription regulatory region DNA binding | 4.98E-02 |