co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071474: cellular hyperosmotic response	0.00E+00
2	GO:0034337: RNA folding	0.00E+00
3	GO:0002184: cytoplasmic translational termination	0.00E+00
4	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
5	GO:0016553: base conversion or substitution editing	0.00E+00
6	GO:0090279: regulation of calcium ion import	0.00E+00
7	GO:0033494: ferulate metabolic process	0.00E+00
8	GO:0090470: shoot organ boundary specification	0.00E+00
9	GO:0005996: monosaccharide metabolic process	0.00E+00
10	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
11	GO:0015995: chlorophyll biosynthetic process	1.61E-08
12	GO:0055114: oxidation-reduction process	9.00E-08
13	GO:0006094: gluconeogenesis	2.95E-06
14	GO:0015979: photosynthesis	1.39E-05
15	GO:0019252: starch biosynthetic process	4.73E-05
16	GO:0006633: fatty acid biosynthetic process	6.64E-05
17	GO:0010021: amylopectin biosynthetic process	8.71E-05
18	GO:0006021: inositol biosynthetic process	8.71E-05
19	GO:0010027: thylakoid membrane organization	1.08E-04
20	GO:0010207: photosystem II assembly	1.10E-04
21	GO:0010143: cutin biosynthetic process	1.10E-04
22	GO:0009735: response to cytokinin	1.45E-04
23	GO:0046855: inositol phosphate dephosphorylation	1.95E-04
24	GO:0000481: maturation of 5S rRNA	3.78E-04
25	GO:0043953: protein transport by the Tat complex	3.78E-04
26	GO:0015801: aromatic amino acid transport	3.78E-04
27	GO:1904964: positive regulation of phytol biosynthetic process	3.78E-04
28	GO:0065002: intracellular protein transmembrane transport	3.78E-04
29	GO:0043686: co-translational protein modification	3.78E-04
30	GO:0071277: cellular response to calcium ion	3.78E-04
31	GO:0046167: glycerol-3-phosphate biosynthetic process	3.78E-04
32	GO:1902458: positive regulation of stomatal opening	3.78E-04
33	GO:0000476: maturation of 4.5S rRNA	3.78E-04
34	GO:0000967: rRNA 5'-end processing	3.78E-04
35	GO:0015969: guanosine tetraphosphate metabolic process	3.78E-04
36	GO:0009090: homoserine biosynthetic process	3.78E-04
37	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	3.78E-04
38	GO:0043489: RNA stabilization	3.78E-04
39	GO:1904966: positive regulation of vitamin E biosynthetic process	3.78E-04
40	GO:0016559: peroxisome fission	4.26E-04
41	GO:0048564: photosystem I assembly	4.26E-04
42	GO:0009704: de-etiolation	4.26E-04
43	GO:0032544: plastid translation	5.22E-04
44	GO:0006098: pentose-phosphate shunt	6.25E-04
45	GO:0006783: heme biosynthetic process	6.25E-04
46	GO:0006096: glycolytic process	8.10E-04
47	GO:0006650: glycerophospholipid metabolic process	8.22E-04
48	GO:1903426: regulation of reactive oxygen species biosynthetic process	8.22E-04
49	GO:0015790: UDP-xylose transport	8.22E-04
50	GO:0030388: fructose 1,6-bisphosphate metabolic process	8.22E-04
51	GO:0051262: protein tetramerization	8.22E-04
52	GO:0034470: ncRNA processing	8.22E-04
53	GO:0030187: melatonin biosynthetic process	8.22E-04
54	GO:1902326: positive regulation of chlorophyll biosynthetic process	8.22E-04
55	GO:0009658: chloroplast organization	1.10E-03
56	GO:0006396: RNA processing	1.12E-03
57	GO:0016024: CDP-diacylglycerol biosynthetic process	1.13E-03
58	GO:0006790: sulfur compound metabolic process	1.13E-03
59	GO:0044375: regulation of peroxisome size	1.33E-03
60	GO:0006000: fructose metabolic process	1.33E-03
61	GO:0034051: negative regulation of plant-type hypersensitive response	1.33E-03
62	GO:0046168: glycerol-3-phosphate catabolic process	1.33E-03
63	GO:0009405: pathogenesis	1.33E-03
64	GO:0046854: phosphatidylinositol phosphorylation	1.61E-03
65	GO:0044550: secondary metabolite biosynthetic process	1.86E-03
66	GO:2001141: regulation of RNA biosynthetic process	1.92E-03
67	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.92E-03
68	GO:0009067: aspartate family amino acid biosynthetic process	1.92E-03
69	GO:0010371: regulation of gibberellin biosynthetic process	1.92E-03
70	GO:0006020: inositol metabolic process	1.92E-03
71	GO:0009152: purine ribonucleotide biosynthetic process	1.92E-03
72	GO:0046653: tetrahydrofolate metabolic process	1.92E-03
73	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.92E-03
74	GO:0033014: tetrapyrrole biosynthetic process	1.92E-03
75	GO:0010731: protein glutathionylation	1.92E-03
76	GO:0006072: glycerol-3-phosphate metabolic process	1.92E-03
77	GO:0046739: transport of virus in multicellular host	1.92E-03
78	GO:1901332: negative regulation of lateral root development	1.92E-03
79	GO:0006631: fatty acid metabolic process	2.25E-03
80	GO:0045727: positive regulation of translation	2.58E-03
81	GO:0006546: glycine catabolic process	2.58E-03
82	GO:0010600: regulation of auxin biosynthetic process	2.58E-03
83	GO:0005975: carbohydrate metabolic process	3.01E-03
84	GO:0010236: plastoquinone biosynthetic process	3.30E-03
85	GO:0045038: protein import into chloroplast thylakoid membrane	3.30E-03
86	GO:0031365: N-terminal protein amino acid modification	3.30E-03
87	GO:0000304: response to singlet oxygen	3.30E-03
88	GO:0006564: L-serine biosynthetic process	3.30E-03
89	GO:0006014: D-ribose metabolic process	4.08E-03
90	GO:0010304: PSII associated light-harvesting complex II catabolic process	4.08E-03
91	GO:0042549: photosystem II stabilization	4.08E-03
92	GO:0000470: maturation of LSU-rRNA	4.08E-03
93	GO:0006655: phosphatidylglycerol biosynthetic process	4.08E-03
94	GO:0045962: positive regulation of development, heterochronic	4.08E-03
95	GO:0006412: translation	4.53E-03
96	GO:0030488: tRNA methylation	4.92E-03
97	GO:1901259: chloroplast rRNA processing	4.92E-03
98	GO:0000054: ribosomal subunit export from nucleus	4.92E-03
99	GO:0009854: oxidative photosynthetic carbon pathway	4.92E-03
100	GO:0009088: threonine biosynthetic process	4.92E-03
101	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	4.92E-03
102	GO:0050790: regulation of catalytic activity	5.81E-03
103	GO:0010161: red light signaling pathway	5.81E-03
104	GO:0009395: phospholipid catabolic process	5.81E-03
105	GO:0009772: photosynthetic electron transport in photosystem II	5.81E-03
106	GO:0006400: tRNA modification	5.81E-03
107	GO:2000070: regulation of response to water deprivation	6.75E-03
108	GO:0010928: regulation of auxin mediated signaling pathway	6.75E-03
109	GO:0005978: glycogen biosynthetic process	6.75E-03
110	GO:0032508: DNA duplex unwinding	6.75E-03
111	GO:0009657: plastid organization	7.75E-03
112	GO:0009932: cell tip growth	7.75E-03
113	GO:0006002: fructose 6-phosphate metabolic process	7.75E-03
114	GO:0071482: cellular response to light stimulus	7.75E-03
115	GO:0015996: chlorophyll catabolic process	7.75E-03
116	GO:0007186: G-protein coupled receptor signaling pathway	7.75E-03
117	GO:0006526: arginine biosynthetic process	7.75E-03
118	GO:0006754: ATP biosynthetic process	8.79E-03
119	GO:0010206: photosystem II repair	8.79E-03
120	GO:0090333: regulation of stomatal closure	8.79E-03
121	GO:0010311: lateral root formation	9.74E-03
122	GO:0005982: starch metabolic process	9.89E-03
123	GO:0010205: photoinhibition	9.89E-03
124	GO:0006779: porphyrin-containing compound biosynthetic process	9.89E-03
125	GO:0009086: methionine biosynthetic process	9.89E-03
126	GO:0043069: negative regulation of programmed cell death	1.10E-02
127	GO:0006535: cysteine biosynthetic process from serine	1.10E-02
128	GO:0006782: protoporphyrinogen IX biosynthetic process	1.10E-02
129	GO:0009853: photorespiration	1.18E-02
130	GO:0016051: carbohydrate biosynthetic process	1.18E-02
131	GO:0008285: negative regulation of cell proliferation	1.22E-02
132	GO:0018119: peptidyl-cysteine S-nitrosylation	1.22E-02
133	GO:0006415: translational termination	1.22E-02
134	GO:0019684: photosynthesis, light reaction	1.22E-02
135	GO:0009089: lysine biosynthetic process via diaminopimelate	1.22E-02
136	GO:0072593: reactive oxygen species metabolic process	1.22E-02
137	GO:0009773: photosynthetic electron transport in photosystem I	1.22E-02
138	GO:0006352: DNA-templated transcription, initiation	1.22E-02
139	GO:0000272: polysaccharide catabolic process	1.22E-02
140	GO:0045037: protein import into chloroplast stroma	1.34E-02
141	GO:0018107: peptidyl-threonine phosphorylation	1.47E-02
142	GO:0009718: anthocyanin-containing compound biosynthetic process	1.47E-02
143	GO:0009767: photosynthetic electron transport chain	1.47E-02
144	GO:0005986: sucrose biosynthetic process	1.47E-02
145	GO:0019253: reductive pentose-phosphate cycle	1.60E-02
146	GO:0009266: response to temperature stimulus	1.60E-02
147	GO:0010020: chloroplast fission	1.60E-02
148	GO:0009636: response to toxic substance	1.71E-02
149	GO:0007031: peroxisome organization	1.74E-02
150	GO:0042343: indole glucosinolate metabolic process	1.74E-02
151	GO:0019853: L-ascorbic acid biosynthetic process	1.74E-02
152	GO:0006833: water transport	1.88E-02
153	GO:0019762: glucosinolate catabolic process	1.88E-02
154	GO:0010025: wax biosynthetic process	1.88E-02
155	GO:0006636: unsaturated fatty acid biosynthetic process	1.88E-02
156	GO:0006289: nucleotide-excision repair	2.02E-02
157	GO:0019344: cysteine biosynthetic process	2.02E-02
158	GO:0006364: rRNA processing	2.05E-02
159	GO:0006810: transport	2.14E-02
160	GO:0007017: microtubule-based process	2.17E-02
161	GO:0010073: meristem maintenance	2.17E-02
162	GO:0048511: rhythmic process	2.32E-02
163	GO:0098542: defense response to other organism	2.32E-02
164	GO:0010431: seed maturation	2.32E-02
165	GO:0061077: chaperone-mediated protein folding	2.32E-02
166	GO:0031408: oxylipin biosynthetic process	2.32E-02
167	GO:0003333: amino acid transmembrane transport	2.32E-02
168	GO:0046686: response to cadmium ion	2.39E-02
169	GO:0035428: hexose transmembrane transport	2.48E-02
170	GO:0080092: regulation of pollen tube growth	2.48E-02
171	GO:0019748: secondary metabolic process	2.48E-02
172	GO:0016226: iron-sulfur cluster assembly	2.48E-02
173	GO:0010017: red or far-red light signaling pathway	2.48E-02
174	GO:0010227: floral organ abscission	2.64E-02
175	GO:0009306: protein secretion	2.80E-02
176	GO:0019722: calcium-mediated signaling	2.80E-02
177	GO:0009742: brassinosteroid mediated signaling pathway	3.10E-02
178	GO:0034220: ion transmembrane transport	3.13E-02
179	GO:0042631: cellular response to water deprivation	3.13E-02
180	GO:0010182: sugar mediated signaling pathway	3.30E-02
181	GO:0046323: glucose import	3.30E-02
182	GO:0006520: cellular amino acid metabolic process	3.30E-02
183	GO:0015986: ATP synthesis coupled proton transport	3.48E-02
184	GO:0008654: phospholipid biosynthetic process	3.66E-02
185	GO:0000302: response to reactive oxygen species	3.83E-02
186	GO:0016032: viral process	4.02E-02
187	GO:0006457: protein folding	4.12E-02
188	GO:0042744: hydrogen peroxide catabolic process	4.16E-02
189	GO:0030163: protein catabolic process	4.21E-02
190	GO:0015031: protein transport	4.33E-02
191	GO:0009567: double fertilization forming a zygote and endosperm	4.40E-02
192	GO:0007267: cell-cell signaling	4.59E-02
193	GO:0006413: translational initiation	4.69E-02
194	GO:0016126: sterol biosynthetic process	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
2	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
3	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
4	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
5	GO:0004059: aralkylamine N-acetyltransferase activity	0.00E+00
6	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
7	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
8	GO:0008887: glycerate kinase activity	0.00E+00
9	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
10	GO:0050613: delta14-sterol reductase activity	0.00E+00
11	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
12	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
13	GO:0019843: rRNA binding	2.15E-07
14	GO:0004332: fructose-bisphosphate aldolase activity	3.42E-06
15	GO:0052832: inositol monophosphate 3-phosphatase activity	6.42E-06
16	GO:0008934: inositol monophosphate 1-phosphatase activity	6.42E-06
17	GO:0052833: inositol monophosphate 4-phosphatase activity	6.42E-06
18	GO:0016491: oxidoreductase activity	1.18E-05
19	GO:0016851: magnesium chelatase activity	4.92E-05
20	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.25E-05
21	GO:0031072: heat shock protein binding	9.17E-05
22	GO:0005528: FK506 binding	1.79E-04
23	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.95E-04
24	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.63E-04
25	GO:0004325: ferrochelatase activity	3.78E-04
26	GO:0004853: uroporphyrinogen decarboxylase activity	3.78E-04
27	GO:0042586: peptide deformylase activity	3.78E-04
28	GO:0031957: very long-chain fatty acid-CoA ligase activity	3.78E-04
29	GO:0010347: L-galactose-1-phosphate phosphatase activity	3.78E-04
30	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	3.78E-04
31	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	3.78E-04
32	GO:0005227: calcium activated cation channel activity	3.78E-04
33	GO:0004856: xylulokinase activity	3.78E-04
34	GO:0080042: ADP-glucose pyrophosphohydrolase activity	3.78E-04
35	GO:0080132: fatty acid alpha-hydroxylase activity	3.78E-04
36	GO:0004412: homoserine dehydrogenase activity	8.22E-04
37	GO:0050017: L-3-cyanoalanine synthase activity	8.22E-04
38	GO:0042389: omega-3 fatty acid desaturase activity	8.22E-04
39	GO:0080041: ADP-ribose pyrophosphohydrolase activity	8.22E-04
40	GO:0010297: heteropolysaccharide binding	8.22E-04
41	GO:0009977: proton motive force dependent protein transmembrane transporter activity	8.22E-04
42	GO:0004617: phosphoglycerate dehydrogenase activity	8.22E-04
43	GO:0004047: aminomethyltransferase activity	8.22E-04
44	GO:0033201: alpha-1,4-glucan synthase activity	8.22E-04
45	GO:0015173: aromatic amino acid transmembrane transporter activity	8.22E-04
46	GO:0018708: thiol S-methyltransferase activity	8.22E-04
47	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	8.22E-04
48	GO:0003844: 1,4-alpha-glucan branching enzyme activity	8.22E-04
49	GO:0016630: protochlorophyllide reductase activity	8.22E-04
50	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	8.22E-04
51	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	8.22E-04
52	GO:0043024: ribosomal small subunit binding	8.22E-04
53	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	8.22E-04
54	GO:0008728: GTP diphosphokinase activity	8.22E-04
55	GO:0005464: UDP-xylose transmembrane transporter activity	8.22E-04
56	GO:0004565: beta-galactosidase activity	1.28E-03
57	GO:0030267: glyoxylate reductase (NADP) activity	1.33E-03
58	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.33E-03
59	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.33E-03
60	GO:0008864: formyltetrahydrofolate deformylase activity	1.33E-03
61	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.33E-03
62	GO:0005504: fatty acid binding	1.33E-03
63	GO:0043169: cation binding	1.33E-03
64	GO:0004373: glycogen (starch) synthase activity	1.33E-03
65	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.33E-03
66	GO:0050734: hydroxycinnamoyltransferase activity	1.33E-03
67	GO:0004751: ribose-5-phosphate isomerase activity	1.33E-03
68	GO:0008266: poly(U) RNA binding	1.44E-03
69	GO:0003993: acid phosphatase activity	1.91E-03
70	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.92E-03
71	GO:0043023: ribosomal large subunit binding	1.92E-03
72	GO:0004072: aspartate kinase activity	1.92E-03
73	GO:0003735: structural constituent of ribosome	2.10E-03
74	GO:0043495: protein anchor	2.58E-03
75	GO:0001053: plastid sigma factor activity	2.58E-03
76	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.58E-03
77	GO:0070628: proteasome binding	2.58E-03
78	GO:0045430: chalcone isomerase activity	2.58E-03
79	GO:0016987: sigma factor activity	2.58E-03
80	GO:0009011: starch synthase activity	2.58E-03
81	GO:0051287: NAD binding	3.19E-03
82	GO:0003959: NADPH dehydrogenase activity	3.30E-03
83	GO:0005275: amine transmembrane transporter activity	3.30E-03
84	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.30E-03
85	GO:0008080: N-acetyltransferase activity	3.96E-03
86	GO:0042578: phosphoric ester hydrolase activity	4.08E-03
87	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	4.08E-03
88	GO:0031593: polyubiquitin binding	4.08E-03
89	GO:0004130: cytochrome-c peroxidase activity	4.08E-03
90	GO:0048038: quinone binding	4.89E-03
91	GO:0004747: ribokinase activity	4.92E-03
92	GO:0005261: cation channel activity	4.92E-03
93	GO:0004124: cysteine synthase activity	4.92E-03
94	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	4.92E-03
95	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	4.92E-03
96	GO:0102391: decanoate--CoA ligase activity	4.92E-03
97	GO:0051082: unfolded protein binding	5.73E-03
98	GO:0004467: long-chain fatty acid-CoA ligase activity	5.81E-03
99	GO:0019899: enzyme binding	5.81E-03
100	GO:0003723: RNA binding	6.56E-03
101	GO:0016597: amino acid binding	6.69E-03
102	GO:0004033: aldo-keto reductase (NADP) activity	6.75E-03
103	GO:0008865: fructokinase activity	6.75E-03
104	GO:0004525: ribonuclease III activity	6.75E-03
105	GO:0016887: ATPase activity	6.89E-03
106	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	7.75E-03
107	GO:0008173: RNA methyltransferase activity	7.75E-03
108	GO:0071949: FAD binding	8.79E-03
109	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	9.84E-03
110	GO:0030955: potassium ion binding	9.89E-03
111	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	9.89E-03
112	GO:0004743: pyruvate kinase activity	9.89E-03
113	GO:0005506: iron ion binding	9.92E-03
114	GO:0004222: metalloendopeptidase activity	1.02E-02
115	GO:0030234: enzyme regulator activity	1.10E-02
116	GO:0003746: translation elongation factor activity	1.18E-02
117	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.22E-02
118	GO:0004364: glutathione transferase activity	1.46E-02
119	GO:0019888: protein phosphatase regulator activity	1.47E-02
120	GO:0004185: serine-type carboxypeptidase activity	1.52E-02
121	GO:0042802: identical protein binding	1.56E-02
122	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.60E-02
123	GO:0005198: structural molecule activity	1.71E-02
124	GO:0016787: hydrolase activity	1.75E-02
125	GO:0004601: peroxidase activity	2.01E-02
126	GO:0051536: iron-sulfur cluster binding	2.02E-02
127	GO:0043130: ubiquitin binding	2.02E-02
128	GO:0016788: hydrolase activity, acting on ester bonds	2.05E-02
129	GO:0005525: GTP binding	2.06E-02
130	GO:0003729: mRNA binding	2.19E-02
131	GO:0004176: ATP-dependent peptidase activity	2.32E-02
132	GO:0020037: heme binding	2.44E-02
133	GO:0022891: substrate-specific transmembrane transporter activity	2.64E-02
134	GO:0003727: single-stranded RNA binding	2.80E-02
135	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.30E-02
136	GO:0005355: glucose transmembrane transporter activity	3.48E-02
137	GO:0050662: coenzyme binding	3.48E-02
138	GO:0016740: transferase activity	3.78E-02
139	GO:0016791: phosphatase activity	4.40E-02
140	GO:0003684: damaged DNA binding	4.40E-02
141	GO:0008237: metallopeptidase activity	4.59E-02
142	GO:0008483: transaminase activity	4.59E-02
143	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.59E-02
144	GO:0005200: structural constituent of cytoskeleton	4.59E-02
145	GO:0019825: oxygen binding	4.72E-02
146	GO:0005507: copper ion binding	4.72E-02
147	GO:0015250: water channel activity	4.98E-02