Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G71500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033494: ferulate metabolic process0.00E+00
2GO:0015717: triose phosphate transport0.00E+00
3GO:0005996: monosaccharide metabolic process0.00E+00
4GO:0071474: cellular hyperosmotic response0.00E+00
5GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
6GO:0046471: phosphatidylglycerol metabolic process0.00E+00
7GO:0034337: RNA folding0.00E+00
8GO:0006982: response to lipid hydroperoxide0.00E+00
9GO:0002184: cytoplasmic translational termination0.00E+00
10GO:0010335: response to non-ionic osmotic stress0.00E+00
11GO:1901918: negative regulation of exoribonuclease activity0.00E+00
12GO:0016553: base conversion or substitution editing0.00E+00
13GO:0090279: regulation of calcium ion import0.00E+00
14GO:0015995: chlorophyll biosynthetic process1.22E-12
15GO:0006094: gluconeogenesis1.27E-07
16GO:0010207: photosystem II assembly1.82E-07
17GO:0015979: photosynthesis5.82E-07
18GO:0055114: oxidation-reduction process8.98E-07
19GO:0019252: starch biosynthetic process4.87E-06
20GO:0030388: fructose 1,6-bisphosphate metabolic process9.64E-06
21GO:0009658: chloroplast organization1.24E-05
22GO:0006000: fructose metabolic process3.30E-05
23GO:0032544: plastid translation3.35E-05
24GO:0071482: cellular response to light stimulus3.35E-05
25GO:0006783: heme biosynthetic process4.57E-05
26GO:2001141: regulation of RNA biosynthetic process7.10E-05
27GO:0009773: photosynthetic electron transport in photosystem I9.71E-05
28GO:0010021: amylopectin biosynthetic process1.24E-04
29GO:0006546: glycine catabolic process1.24E-04
30GO:0015994: chlorophyll metabolic process1.24E-04
31GO:0019253: reductive pentose-phosphate cycle1.74E-04
32GO:0006636: unsaturated fatty acid biosynthetic process2.39E-04
33GO:0009735: response to cytokinin3.46E-04
34GO:1904966: positive regulation of vitamin E biosynthetic process4.67E-04
35GO:0000481: maturation of 5S rRNA4.67E-04
36GO:0015801: aromatic amino acid transport4.67E-04
37GO:1904964: positive regulation of phytol biosynthetic process4.67E-04
38GO:0043953: protein transport by the Tat complex4.67E-04
39GO:0010426: DNA methylation on cytosine within a CHH sequence4.67E-04
40GO:0065002: intracellular protein transmembrane transport4.67E-04
41GO:0043686: co-translational protein modification4.67E-04
42GO:0043087: regulation of GTPase activity4.67E-04
43GO:0071461: cellular response to redox state4.67E-04
44GO:0051775: response to redox state4.67E-04
45GO:0071277: cellular response to calcium ion4.67E-04
46GO:0046167: glycerol-3-phosphate biosynthetic process4.67E-04
47GO:1902458: positive regulation of stomatal opening4.67E-04
48GO:0015969: guanosine tetraphosphate metabolic process4.67E-04
49GO:0046467: membrane lipid biosynthetic process4.67E-04
50GO:1902478: negative regulation of defense response to bacterium, incompatible interaction4.67E-04
51GO:0043489: RNA stabilization4.67E-04
52GO:0009704: de-etiolation5.81E-04
53GO:0016559: peroxisome fission5.81E-04
54GO:0048564: photosystem I assembly5.81E-04
55GO:0006002: fructose 6-phosphate metabolic process7.08E-04
56GO:0006633: fatty acid biosynthetic process7.58E-04
57GO:0006810: transport7.95E-04
58GO:0044550: secondary metabolite biosynthetic process8.43E-04
59GO:0006098: pentose-phosphate shunt8.48E-04
60GO:0006754: ATP biosynthetic process8.48E-04
61GO:0010205: photoinhibition9.98E-04
62GO:0006779: porphyrin-containing compound biosynthetic process9.98E-04
63GO:0042819: vitamin B6 biosynthetic process1.01E-03
64GO:1902326: positive regulation of chlorophyll biosynthetic process1.01E-03
65GO:0006650: glycerophospholipid metabolic process1.01E-03
66GO:0008616: queuosine biosynthetic process1.01E-03
67GO:0006729: tetrahydrobiopterin biosynthetic process1.01E-03
68GO:1903426: regulation of reactive oxygen species biosynthetic process1.01E-03
69GO:0051262: protein tetramerization1.01E-03
70GO:0035304: regulation of protein dephosphorylation1.01E-03
71GO:0080005: photosystem stoichiometry adjustment1.01E-03
72GO:0006782: protoporphyrinogen IX biosynthetic process1.16E-03
73GO:0006096: glycolytic process1.30E-03
74GO:0006352: DNA-templated transcription, initiation1.34E-03
75GO:0018119: peptidyl-cysteine S-nitrosylation1.34E-03
76GO:0019684: photosynthesis, light reaction1.34E-03
77GO:0010027: thylakoid membrane organization1.42E-03
78GO:0034051: negative regulation of plant-type hypersensitive response1.64E-03
79GO:0046168: glycerol-3-phosphate catabolic process1.64E-03
80GO:0035436: triose phosphate transmembrane transport1.64E-03
81GO:0044375: regulation of peroxisome size1.64E-03
82GO:0006518: peptide metabolic process1.64E-03
83GO:0009767: photosynthetic electron transport chain1.74E-03
84GO:0005986: sucrose biosynthetic process1.74E-03
85GO:0010143: cutin biosynthetic process1.97E-03
86GO:0006072: glycerol-3-phosphate metabolic process2.38E-03
87GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis2.38E-03
88GO:0042823: pyridoxal phosphate biosynthetic process2.38E-03
89GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.38E-03
90GO:0006020: inositol metabolic process2.38E-03
91GO:0009152: purine ribonucleotide biosynthetic process2.38E-03
92GO:0046653: tetrahydrofolate metabolic process2.38E-03
93GO:0006107: oxaloacetate metabolic process2.38E-03
94GO:0033014: tetrapyrrole biosynthetic process2.38E-03
95GO:0008615: pyridoxine biosynthetic process2.38E-03
96GO:0010731: protein glutathionylation2.38E-03
97GO:0009853: photorespiration2.70E-03
98GO:0006021: inositol biosynthetic process3.20E-03
99GO:0006734: NADH metabolic process3.20E-03
100GO:0010600: regulation of auxin biosynthetic process3.20E-03
101GO:0015713: phosphoglycerate transport3.20E-03
102GO:0019464: glycine decarboxylation via glycine cleavage system3.20E-03
103GO:0045727: positive regulation of translation3.20E-03
104GO:0006536: glutamate metabolic process3.20E-03
105GO:0031408: oxylipin biosynthetic process3.31E-03
106GO:0006631: fatty acid metabolic process3.37E-03
107GO:0006564: L-serine biosynthetic process4.10E-03
108GO:0045038: protein import into chloroplast thylakoid membrane4.10E-03
109GO:0006656: phosphatidylcholine biosynthetic process4.10E-03
110GO:0031365: N-terminal protein amino acid modification4.10E-03
111GO:0043097: pyrimidine nucleoside salvage4.10E-03
112GO:0009107: lipoate biosynthetic process4.10E-03
113GO:0016123: xanthophyll biosynthetic process4.10E-03
114GO:0000304: response to singlet oxygen4.10E-03
115GO:0006465: signal peptide processing4.10E-03
116GO:0019722: calcium-mediated signaling4.31E-03
117GO:0042631: cellular response to water deprivation5.05E-03
118GO:0009920: cell plate formation involved in plant-type cell wall biogenesis5.08E-03
119GO:0009643: photosynthetic acclimation5.08E-03
120GO:0006014: D-ribose metabolic process5.08E-03
121GO:0006206: pyrimidine nucleobase metabolic process5.08E-03
122GO:0046855: inositol phosphate dephosphorylation5.08E-03
123GO:0042549: photosystem II stabilization5.08E-03
124GO:0006655: phosphatidylglycerol biosynthetic process5.08E-03
125GO:0032259: methylation5.19E-03
126GO:0010182: sugar mediated signaling pathway5.44E-03
127GO:0006520: cellular amino acid metabolic process5.44E-03
128GO:0010244: response to low fluence blue light stimulus by blue low-fluence system6.13E-03
129GO:0010189: vitamin E biosynthetic process6.13E-03
130GO:0009854: oxidative photosynthetic carbon pathway6.13E-03
131GO:1901259: chloroplast rRNA processing6.13E-03
132GO:0000054: ribosomal subunit export from nucleus6.13E-03
133GO:0045926: negative regulation of growth6.13E-03
134GO:0046686: response to cadmium ion6.82E-03
135GO:0009645: response to low light intensity stimulus7.25E-03
136GO:0006400: tRNA modification7.25E-03
137GO:0010161: red light signaling pathway7.25E-03
138GO:0009772: photosynthetic electron transport in photosystem II7.25E-03
139GO:1900057: positive regulation of leaf senescence7.25E-03
140GO:0010928: regulation of auxin mediated signaling pathway8.44E-03
141GO:0005978: glycogen biosynthetic process8.44E-03
142GO:0032508: DNA duplex unwinding8.44E-03
143GO:2000070: regulation of response to water deprivation8.44E-03
144GO:0042255: ribosome assembly8.44E-03
145GO:0006353: DNA-templated transcription, termination8.44E-03
146GO:0007155: cell adhesion8.44E-03
147GO:0007267: cell-cell signaling8.68E-03
148GO:0006526: arginine biosynthetic process9.69E-03
149GO:0007186: G-protein coupled receptor signaling pathway9.69E-03
150GO:0009657: plastid organization9.69E-03
151GO:0009932: cell tip growth9.69E-03
152GO:0015996: chlorophyll catabolic process9.69E-03
153GO:0090305: nucleic acid phosphodiester bond hydrolysis1.10E-02
154GO:0090333: regulation of stomatal closure1.10E-02
155GO:0010411: xyloglucan metabolic process1.15E-02
156GO:0005982: starch metabolic process1.24E-02
157GO:0018298: protein-chromophore linkage1.28E-02
158GO:0009409: response to cold1.31E-02
159GO:0006535: cysteine biosynthetic process from serine1.38E-02
160GO:0009688: abscisic acid biosynthetic process1.38E-02
161GO:0043069: negative regulation of programmed cell death1.38E-02
162GO:0000272: polysaccharide catabolic process1.53E-02
163GO:0006415: translational termination1.53E-02
164GO:0016051: carbohydrate biosynthetic process1.62E-02
165GO:0005975: carbohydrate metabolic process1.67E-02
166GO:0016024: CDP-diacylglycerol biosynthetic process1.69E-02
167GO:0045037: protein import into chloroplast stroma1.69E-02
168GO:0006790: sulfur compound metabolic process1.69E-02
169GO:0007623: circadian rhythm1.73E-02
170GO:0006108: malate metabolic process1.85E-02
171GO:0006807: nitrogen compound metabolic process1.85E-02
172GO:0018107: peptidyl-threonine phosphorylation1.85E-02
173GO:0009725: response to hormone1.85E-02
174GO:0010020: chloroplast fission2.01E-02
175GO:0009266: response to temperature stimulus2.01E-02
176GO:0034605: cellular response to heat2.01E-02
177GO:0010114: response to red light2.10E-02
178GO:0042546: cell wall biogenesis2.18E-02
179GO:0005985: sucrose metabolic process2.19E-02
180GO:0046854: phosphatidylinositol phosphorylation2.19E-02
181GO:0007031: peroxisome organization2.19E-02
182GO:0042343: indole glucosinolate metabolic process2.19E-02
183GO:0009636: response to toxic substance2.36E-02
184GO:0006833: water transport2.36E-02
185GO:0010025: wax biosynthetic process2.36E-02
186GO:0019344: cysteine biosynthetic process2.54E-02
187GO:0009768: photosynthesis, light harvesting in photosystem I2.73E-02
188GO:0006364: rRNA processing2.83E-02
189GO:0006306: DNA methylation2.92E-02
190GO:0003333: amino acid transmembrane transport2.92E-02
191GO:0048511: rhythmic process2.92E-02
192GO:0098542: defense response to other organism2.92E-02
193GO:0010431: seed maturation2.92E-02
194GO:0061077: chaperone-mediated protein folding2.92E-02
195GO:0042254: ribosome biogenesis3.06E-02
196GO:0030433: ubiquitin-dependent ERAD pathway3.11E-02
197GO:0080092: regulation of pollen tube growth3.11E-02
198GO:0019748: secondary metabolic process3.11E-02
199GO:0016226: iron-sulfur cluster assembly3.11E-02
200GO:0010017: red or far-red light signaling pathway3.11E-02
201GO:0009306: protein secretion3.51E-02
202GO:0006817: phosphate ion transport3.51E-02
203GO:0034220: ion transmembrane transport3.93E-02
204GO:0006396: RNA processing4.14E-02
205GO:0009741: response to brassinosteroid4.15E-02
206GO:0009742: brassinosteroid mediated signaling pathway4.26E-02
207GO:0015986: ATP synthesis coupled proton transport4.37E-02
208GO:0009646: response to absence of light4.37E-02
209GO:0009791: post-embryonic development4.59E-02
210GO:0008654: phospholipid biosynthetic process4.59E-02
211GO:0006412: translation4.90E-02
212GO:0042742: defense response to bacterium4.92E-02
RankGO TermAdjusted P value
1GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
2GO:0008974: phosphoribulokinase activity0.00E+00
3GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
4GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
5GO:0004760: serine-pyruvate transaminase activity0.00E+00
6GO:0008465: glycerate dehydrogenase activity0.00E+00
7GO:0046408: chlorophyll synthetase activity0.00E+00
8GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
9GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
10GO:0050281: serine-glyoxylate transaminase activity0.00E+00
11GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
12GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity0.00E+00
13GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
14GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
15GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
16GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
17GO:0045550: geranylgeranyl reductase activity0.00E+00
18GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
19GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
20GO:0090711: FMN hydrolase activity0.00E+00
21GO:0019843: rRNA binding7.36E-07
22GO:0004332: fructose-bisphosphate aldolase activity5.92E-06
23GO:0008266: poly(U) RNA binding7.70E-06
24GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity9.64E-06
25GO:0016491: oxidoreductase activity4.92E-05
26GO:0016851: magnesium chelatase activity7.10E-05
27GO:0001053: plastid sigma factor activity1.24E-04
28GO:0009011: starch synthase activity1.24E-04
29GO:0016987: sigma factor activity1.24E-04
30GO:0080132: fatty acid alpha-hydroxylase activity4.67E-04
31GO:0010242: oxygen evolving activity4.67E-04
32GO:0008746: NAD(P)+ transhydrogenase activity4.67E-04
33GO:0004325: ferrochelatase activity4.67E-04
34GO:0004853: uroporphyrinogen decarboxylase activity4.67E-04
35GO:0042586: peptide deformylase activity4.67E-04
36GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity4.67E-04
37GO:0031957: very long-chain fatty acid-CoA ligase activity4.67E-04
38GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity4.67E-04
39GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity4.67E-04
40GO:0030794: (S)-coclaurine-N-methyltransferase activity4.67E-04
41GO:0005227: calcium activated cation channel activity4.67E-04
42GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.08E-04
43GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.15E-04
44GO:0071949: FAD binding8.48E-04
45GO:0051287: NAD binding8.62E-04
46GO:0048038: quinone binding8.95E-04
47GO:0043024: ribosomal small subunit binding1.01E-03
48GO:0008728: GTP diphosphokinase activity1.01E-03
49GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.01E-03
50GO:0000234: phosphoethanolamine N-methyltransferase activity1.01E-03
51GO:0008934: inositol monophosphate 1-phosphatase activity1.01E-03
52GO:0052833: inositol monophosphate 4-phosphatase activity1.01E-03
53GO:0050017: L-3-cyanoalanine synthase activity1.01E-03
54GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity1.01E-03
55GO:0008883: glutamyl-tRNA reductase activity1.01E-03
56GO:0047746: chlorophyllase activity1.01E-03
57GO:0042389: omega-3 fatty acid desaturase activity1.01E-03
58GO:0010297: heteropolysaccharide binding1.01E-03
59GO:0009977: proton motive force dependent protein transmembrane transporter activity1.01E-03
60GO:0004617: phosphoglycerate dehydrogenase activity1.01E-03
61GO:0004047: aminomethyltransferase activity1.01E-03
62GO:0052832: inositol monophosphate 3-phosphatase activity1.01E-03
63GO:0033201: alpha-1,4-glucan synthase activity1.01E-03
64GO:0015173: aromatic amino acid transmembrane transporter activity1.01E-03
65GO:0018708: thiol S-methyltransferase activity1.01E-03
66GO:0003844: 1,4-alpha-glucan branching enzyme activity1.01E-03
67GO:0008479: queuine tRNA-ribosyltransferase activity1.01E-03
68GO:0030234: enzyme regulator activity1.16E-03
69GO:0004373: glycogen (starch) synthase activity1.64E-03
70GO:0050734: hydroxycinnamoyltransferase activity1.64E-03
71GO:0016992: lipoate synthase activity1.64E-03
72GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.64E-03
73GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.64E-03
74GO:0071917: triose-phosphate transmembrane transporter activity1.64E-03
75GO:0008864: formyltetrahydrofolate deformylase activity1.64E-03
76GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.64E-03
77GO:0010277: chlorophyllide a oxygenase [overall] activity1.64E-03
78GO:0005504: fatty acid binding1.64E-03
79GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.64E-03
80GO:0043169: cation binding1.64E-03
81GO:0004565: beta-galactosidase activity1.74E-03
82GO:0031072: heat shock protein binding1.74E-03
83GO:0043023: ribosomal large subunit binding2.38E-03
84GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.38E-03
85GO:0004351: glutamate decarboxylase activity2.38E-03
86GO:0004375: glycine dehydrogenase (decarboxylating) activity2.38E-03
87GO:0005528: FK506 binding2.73E-03
88GO:0043495: protein anchor3.20E-03
89GO:0015120: phosphoglycerate transmembrane transporter activity3.20E-03
90GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.20E-03
91GO:0008453: alanine-glyoxylate transaminase activity3.20E-03
92GO:0045430: chalcone isomerase activity3.20E-03
93GO:0005275: amine transmembrane transporter activity4.10E-03
94GO:0003727: single-stranded RNA binding4.31E-03
95GO:0004366: glycerol-3-phosphate O-acyltransferase activity5.08E-03
96GO:0016615: malate dehydrogenase activity5.08E-03
97GO:0042578: phosphoric ester hydrolase activity5.08E-03
98GO:0042802: identical protein binding5.77E-03
99GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.13E-03
100GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.13E-03
101GO:0102391: decanoate--CoA ligase activity6.13E-03
102GO:0004747: ribokinase activity6.13E-03
103GO:0030060: L-malate dehydrogenase activity6.13E-03
104GO:0005261: cation channel activity6.13E-03
105GO:0003886: DNA (cytosine-5-)-methyltransferase activity6.13E-03
106GO:0004124: cysteine synthase activity6.13E-03
107GO:0004849: uridine kinase activity6.13E-03
108GO:0005506: iron ion binding6.62E-03
109GO:0016762: xyloglucan:xyloglucosyl transferase activity6.73E-03
110GO:0004467: long-chain fatty acid-CoA ligase activity7.25E-03
111GO:0019899: enzyme binding7.25E-03
112GO:0008865: fructokinase activity8.44E-03
113GO:0008135: translation factor activity, RNA binding9.69E-03
114GO:0016168: chlorophyll binding1.03E-02
115GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism1.10E-02
116GO:0016798: hydrolase activity, acting on glycosyl bonds1.15E-02
117GO:0016887: ATPase activity1.20E-02
118GO:0030955: potassium ion binding1.24E-02
119GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.24E-02
120GO:0004743: pyruvate kinase activity1.24E-02
121GO:0052689: carboxylic ester hydrolase activity1.26E-02
122GO:0004222: metalloendopeptidase activity1.41E-02
123GO:0016787: hydrolase activity1.43E-02
124GO:0005089: Rho guanyl-nucleotide exchange factor activity1.53E-02
125GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.59E-02
126GO:0003746: translation elongation factor activity1.62E-02
127GO:0005315: inorganic phosphate transmembrane transporter activity1.85E-02
128GO:0004364: glutathione transferase activity2.01E-02
129GO:0035091: phosphatidylinositol binding2.27E-02
130GO:0043621: protein self-association2.27E-02
131GO:0031409: pigment binding2.36E-02
132GO:0051536: iron-sulfur cluster binding2.54E-02
133GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.83E-02
134GO:0008168: methyltransferase activity2.85E-02
135GO:0003735: structural constituent of ribosome2.91E-02
136GO:0003690: double-stranded DNA binding2.93E-02
137GO:0022891: substrate-specific transmembrane transporter activity3.31E-02
138GO:0005525: GTP binding3.51E-02
139GO:0003729: mRNA binding3.96E-02
140GO:0051082: unfolded protein binding4.02E-02
141GO:0046933: proton-transporting ATP synthase activity, rotational mechanism4.15E-02
142GO:0005509: calcium ion binding4.32E-02
143GO:0050662: coenzyme binding4.37E-02
144GO:0020037: heme binding4.40E-02
145GO:0004872: receptor activity4.59E-02
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Gene type



Gene DE type