co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G71480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0005996: monosaccharide metabolic process	0.00E+00
2	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
3	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
4	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
5	GO:0015995: chlorophyll biosynthetic process	4.31E-08
6	GO:0032544: plastid translation	5.46E-08
7	GO:0015979: photosynthesis	5.68E-08
8	GO:0009773: photosynthetic electron transport in photosystem I	2.86E-07
9	GO:0009658: chloroplast organization	3.26E-06
10	GO:0010207: photosystem II assembly	3.47E-05
11	GO:0010600: regulation of auxin biosynthetic process	3.60E-05
12	GO:0006636: unsaturated fatty acid biosynthetic process	4.99E-05
13	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.17E-04
14	GO:0009854: oxidative photosynthetic carbon pathway	1.17E-04
15	GO:0055114: oxidation-reduction process	1.88E-04
16	GO:0010928: regulation of auxin mediated signaling pathway	1.97E-04
17	GO:0009704: de-etiolation	1.97E-04
18	GO:0019252: starch biosynthetic process	2.03E-04
19	GO:0043953: protein transport by the Tat complex	2.25E-04
20	GO:0071277: cellular response to calcium ion	2.25E-04
21	GO:0046467: membrane lipid biosynthetic process	2.25E-04
22	GO:0065002: intracellular protein transmembrane transport	2.25E-04
23	GO:0080093: regulation of photorespiration	2.25E-04
24	GO:0031998: regulation of fatty acid beta-oxidation	2.25E-04
25	GO:0034337: RNA folding	2.25E-04
26	GO:0006754: ATP biosynthetic process	2.95E-04
27	GO:0010027: thylakoid membrane organization	3.67E-04
28	GO:0018119: peptidyl-cysteine S-nitrosylation	4.76E-04
29	GO:0008616: queuosine biosynthetic process	5.00E-04
30	GO:0006729: tetrahydrobiopterin biosynthetic process	5.00E-04
31	GO:0030388: fructose 1,6-bisphosphate metabolic process	5.00E-04
32	GO:0006094: gluconeogenesis	6.19E-04
33	GO:0019253: reductive pentose-phosphate cycle	6.96E-04
34	GO:0034599: cellular response to oxidative stress	7.39E-04
35	GO:0007031: peroxisome organization	7.77E-04
36	GO:0006000: fructose metabolic process	8.13E-04
37	GO:0090391: granum assembly	8.13E-04
38	GO:0006518: peptide metabolic process	8.13E-04
39	GO:0044375: regulation of peroxisome size	8.13E-04
40	GO:0009768: photosynthesis, light harvesting in photosystem I	1.05E-03
41	GO:0010731: protein glutathionylation	1.16E-03
42	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.16E-03
43	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.16E-03
44	GO:0071484: cellular response to light intensity	1.16E-03
45	GO:0009152: purine ribonucleotide biosynthetic process	1.16E-03
46	GO:0046653: tetrahydrofolate metabolic process	1.16E-03
47	GO:0006810: transport	1.46E-03
48	GO:0045727: positive regulation of translation	1.54E-03
49	GO:0015994: chlorophyll metabolic process	1.54E-03
50	GO:0010021: amylopectin biosynthetic process	1.54E-03
51	GO:0015976: carbon utilization	1.54E-03
52	GO:0042631: cellular response to water deprivation	1.73E-03
53	GO:0009735: response to cytokinin	1.94E-03
54	GO:0006656: phosphatidylcholine biosynthetic process	1.97E-03
55	GO:0043097: pyrimidine nucleoside salvage	1.97E-03
56	GO:0006097: glyoxylate cycle	1.97E-03
57	GO:0009107: lipoate biosynthetic process	1.97E-03
58	GO:0006206: pyrimidine nucleobase metabolic process	2.43E-03
59	GO:0050665: hydrogen peroxide biosynthetic process	2.43E-03
60	GO:1901259: chloroplast rRNA processing	2.91E-03
61	GO:0010189: vitamin E biosynthetic process	2.91E-03
62	GO:0010196: nonphotochemical quenching	3.43E-03
63	GO:1900057: positive regulation of leaf senescence	3.43E-03
64	GO:0009645: response to low light intensity stimulus	3.43E-03
65	GO:0010161: red light signaling pathway	3.43E-03
66	GO:0009772: photosynthetic electron transport in photosystem II	3.43E-03
67	GO:0032259: methylation	3.51E-03
68	GO:0042255: ribosome assembly	3.98E-03
69	GO:0006353: DNA-templated transcription, termination	3.98E-03
70	GO:0016559: peroxisome fission	3.98E-03
71	GO:0018298: protein-chromophore linkage	4.31E-03
72	GO:0009657: plastid organization	4.56E-03
73	GO:0006002: fructose 6-phosphate metabolic process	4.56E-03
74	GO:0071482: cellular response to light stimulus	4.56E-03
75	GO:0010206: photosystem II repair	5.16E-03
76	GO:0090333: regulation of stomatal closure	5.16E-03
77	GO:0006783: heme biosynthetic process	5.16E-03
78	GO:0009853: photorespiration	5.46E-03
79	GO:0010205: photoinhibition	5.79E-03
80	GO:0006779: porphyrin-containing compound biosynthetic process	5.79E-03
81	GO:0006782: protoporphyrinogen IX biosynthetic process	6.45E-03
82	GO:0010114: response to red light	7.04E-03
83	GO:0000272: polysaccharide catabolic process	7.13E-03
84	GO:0042742: defense response to bacterium	7.80E-03
85	GO:0006108: malate metabolic process	8.57E-03
86	GO:0018107: peptidyl-threonine phosphorylation	8.57E-03
87	GO:0009725: response to hormone	8.57E-03
88	GO:0009767: photosynthetic electron transport chain	8.57E-03
89	GO:0005986: sucrose biosynthetic process	8.57E-03
90	GO:0009266: response to temperature stimulus	9.33E-03
91	GO:0009585: red, far-red light phototransduction	9.50E-03
92	GO:0019762: glucosinolate catabolic process	1.09E-02
93	GO:0031408: oxylipin biosynthetic process	1.34E-02
94	GO:0061077: chaperone-mediated protein folding	1.34E-02
95	GO:0016226: iron-sulfur cluster assembly	1.43E-02
96	GO:0030433: ubiquitin-dependent ERAD pathway	1.43E-02
97	GO:0007005: mitochondrion organization	1.43E-02
98	GO:0019748: secondary metabolic process	1.43E-02
99	GO:0010017: red or far-red light signaling pathway	1.43E-02
100	GO:0009693: ethylene biosynthetic process	1.53E-02
101	GO:0005975: carbohydrate metabolic process	1.61E-02
102	GO:0009561: megagametogenesis	1.62E-02
103	GO:0009306: protein secretion	1.62E-02
104	GO:0009058: biosynthetic process	1.79E-02
105	GO:0006662: glycerol ether metabolic process	1.91E-02
106	GO:0015986: ATP synthesis coupled proton transport	2.01E-02
107	GO:0006814: sodium ion transport	2.01E-02
108	GO:0000302: response to reactive oxygen species	2.22E-02
109	GO:0010583: response to cyclopentenone	2.32E-02
110	GO:0032502: developmental process	2.32E-02
111	GO:0007623: circadian rhythm	2.35E-02
112	GO:0009567: double fertilization forming a zygote and endosperm	2.54E-02
113	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.00E-02
114	GO:0010411: xyloglucan metabolic process	3.24E-02
115	GO:0042254: ribosome biogenesis	3.70E-02
116	GO:0010218: response to far red light	3.73E-02
117	GO:0007568: aging	3.86E-02
118	GO:0016051: carbohydrate biosynthetic process	4.12E-02
119	GO:0009637: response to blue light	4.12E-02
120	GO:0006099: tricarboxylic acid cycle	4.25E-02
121	GO:0044550: secondary metabolite biosynthetic process	4.87E-02
122	GO:0009744: response to sucrose	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
2	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
3	GO:0045550: geranylgeranyl reductase activity	0.00E+00
4	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
5	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
6	GO:0008974: phosphoribulokinase activity	0.00E+00
7	GO:0008465: glycerate dehydrogenase activity	0.00E+00
8	GO:0046408: chlorophyll synthetase activity	0.00E+00
9	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
10	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
11	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
12	GO:0018708: thiol S-methyltransferase activity	2.37E-06
13	GO:0009011: starch synthase activity	3.60E-05
14	GO:0019843: rRNA binding	5.79E-05
15	GO:0048038: quinone binding	2.23E-04
16	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	2.25E-04
17	GO:0030794: (S)-coclaurine-N-methyltransferase activity	2.25E-04
18	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.44E-04
19	GO:0016491: oxidoreductase activity	3.28E-04
20	GO:0000234: phosphoethanolamine N-methyltransferase activity	5.00E-04
21	GO:0008883: glutamyl-tRNA reductase activity	5.00E-04
22	GO:0047746: chlorophyllase activity	5.00E-04
23	GO:0042389: omega-3 fatty acid desaturase activity	5.00E-04
24	GO:0010297: heteropolysaccharide binding	5.00E-04
25	GO:0009977: proton motive force dependent protein transmembrane transporter activity	5.00E-04
26	GO:0033201: alpha-1,4-glucan synthase activity	5.00E-04
27	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	5.00E-04
28	GO:0008479: queuine tRNA-ribosyltransferase activity	5.00E-04
29	GO:0031072: heat shock protein binding	6.19E-04
30	GO:0004373: glycogen (starch) synthase activity	8.13E-04
31	GO:0016992: lipoate synthase activity	8.13E-04
32	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	8.13E-04
33	GO:0008864: formyltetrahydrofolate deformylase activity	8.13E-04
34	GO:0010277: chlorophyllide a oxygenase [overall] activity	8.13E-04
35	GO:0031409: pigment binding	8.64E-04
36	GO:0005528: FK506 binding	9.55E-04
37	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.16E-03
38	GO:0016851: magnesium chelatase activity	1.16E-03
39	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	1.16E-03
40	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	1.16E-03
41	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	1.16E-03
42	GO:0003727: single-stranded RNA binding	1.48E-03
43	GO:0052793: pectin acetylesterase activity	1.54E-03
44	GO:0008891: glycolate oxidase activity	1.54E-03
45	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.54E-03
46	GO:0004130: cytochrome-c peroxidase activity	2.43E-03
47	GO:0042578: phosphoric ester hydrolase activity	2.43E-03
48	GO:0016615: malate dehydrogenase activity	2.43E-03
49	GO:0004332: fructose-bisphosphate aldolase activity	2.43E-03
50	GO:0030060: L-malate dehydrogenase activity	2.91E-03
51	GO:0004849: uridine kinase activity	2.91E-03
52	GO:0016168: chlorophyll binding	3.50E-03
53	GO:0004033: aldo-keto reductase (NADP) activity	3.98E-03
54	GO:0071949: FAD binding	5.16E-03
55	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.16E-03
56	GO:0042802: identical protein binding	5.89E-03
57	GO:0030234: enzyme regulator activity	6.45E-03
58	GO:0008168: methyltransferase activity	7.21E-03
59	GO:0051537: 2 iron, 2 sulfur cluster binding	7.61E-03
60	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.22E-03
61	GO:0004565: beta-galactosidase activity	8.57E-03
62	GO:0005315: inorganic phosphate transmembrane transporter activity	8.57E-03
63	GO:0004089: carbonate dehydratase activity	8.57E-03
64	GO:0003735: structural constituent of ribosome	8.69E-03
65	GO:0008266: poly(U) RNA binding	9.33E-03
66	GO:0003690: double-stranded DNA binding	9.83E-03
67	GO:0051536: iron-sulfur cluster binding	1.17E-02
68	GO:0051082: unfolded protein binding	1.36E-02
69	GO:0008514: organic anion transmembrane transporter activity	1.62E-02
70	GO:0047134: protein-disulfide reductase activity	1.71E-02
71	GO:0009055: electron carrier activity	1.79E-02
72	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.91E-02
73	GO:0010181: FMN binding	2.01E-02
74	GO:0050662: coenzyme binding	2.01E-02
75	GO:0004791: thioredoxin-disulfide reductase activity	2.01E-02
76	GO:0004872: receptor activity	2.11E-02
77	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.22E-02
78	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.43E-02
79	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.24E-02
80	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.36E-02
81	GO:0004222: metalloendopeptidase activity	3.73E-02
82	GO:0003746: translation elongation factor activity	4.12E-02
83	GO:0050661: NADP binding	4.52E-02
84	GO:0004364: glutathione transferase activity	4.79E-02
85	GO:0004185: serine-type carboxypeptidase activity	4.93E-02