Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G70280

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090615: mitochondrial mRNA processing0.00E+00
2GO:0042794: rRNA transcription from plastid promoter0.00E+00
3GO:0045014: negative regulation of transcription by glucose0.00E+00
4GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
5GO:0090627: plant epidermal cell differentiation0.00E+00
6GO:0009606: tropism0.00E+00
7GO:0035884: arabinan biosynthetic process0.00E+00
8GO:0090322: regulation of superoxide metabolic process0.00E+00
9GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement0.00E+00
10GO:1903224: regulation of endodermal cell differentiation0.00E+00
11GO:0045184: establishment of protein localization0.00E+00
12GO:0080127: fruit septum development0.00E+00
13GO:0046486: glycerolipid metabolic process0.00E+00
14GO:0019988: charged-tRNA amino acid modification0.00E+00
15GO:0042793: transcription from plastid promoter6.39E-08
16GO:0046620: regulation of organ growth4.93E-07
17GO:0010569: regulation of double-strand break repair via homologous recombination1.13E-05
18GO:0009658: chloroplast organization1.89E-05
19GO:0006518: peptide metabolic process3.81E-05
20GO:0009733: response to auxin4.22E-05
21GO:0009734: auxin-activated signaling pathway7.61E-05
22GO:0006949: syncytium formation9.27E-05
23GO:2000038: regulation of stomatal complex development1.41E-04
24GO:0009416: response to light stimulus1.59E-04
25GO:0009828: plant-type cell wall loosening1.70E-04
26GO:0080188: RNA-directed DNA methylation2.42E-04
27GO:0009913: epidermal cell differentiation3.06E-04
28GO:0015904: tetracycline transport5.06E-04
29GO:0034757: negative regulation of iron ion transport5.06E-04
30GO:0042659: regulation of cell fate specification5.06E-04
31GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.06E-04
32GO:0080112: seed growth5.06E-04
33GO:1905039: carboxylic acid transmembrane transport5.06E-04
34GO:1905200: gibberellic acid transmembrane transport5.06E-04
35GO:0090558: plant epidermis development5.06E-04
36GO:1903866: palisade mesophyll development5.06E-04
37GO:0010063: positive regulation of trichoblast fate specification5.06E-04
38GO:0033206: meiotic cytokinesis5.06E-04
39GO:0035987: endodermal cell differentiation5.06E-04
40GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.31E-04
41GO:0042255: ribosome assembly6.54E-04
42GO:0006353: DNA-templated transcription, termination6.54E-04
43GO:0000105: histidine biosynthetic process6.54E-04
44GO:0009926: auxin polar transport7.74E-04
45GO:0080156: mitochondrial mRNA modification1.04E-03
46GO:2000123: positive regulation of stomatal complex development1.09E-03
47GO:1901529: positive regulation of anion channel activity1.09E-03
48GO:0010271: regulation of chlorophyll catabolic process1.09E-03
49GO:0018026: peptidyl-lysine monomethylation1.09E-03
50GO:0006650: glycerophospholipid metabolic process1.09E-03
51GO:0009662: etioplast organization1.09E-03
52GO:1900033: negative regulation of trichome patterning1.09E-03
53GO:2000071: regulation of defense response by callose deposition1.09E-03
54GO:0080009: mRNA methylation1.09E-03
55GO:0009664: plant-type cell wall organization1.09E-03
56GO:1900865: chloroplast RNA modification1.12E-03
57GO:0048829: root cap development1.31E-03
58GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement1.78E-03
59GO:0090708: specification of plant organ axis polarity1.78E-03
60GO:0080117: secondary growth1.78E-03
61GO:0046168: glycerol-3-phosphate catabolic process1.78E-03
62GO:0090391: granum assembly1.78E-03
63GO:0045604: regulation of epidermal cell differentiation1.78E-03
64GO:0001578: microtubule bundle formation1.78E-03
65GO:0010588: cotyledon vascular tissue pattern formation1.96E-03
66GO:0010371: regulation of gibberellin biosynthetic process2.58E-03
67GO:1902476: chloride transmembrane transport2.58E-03
68GO:0010071: root meristem specification2.58E-03
69GO:0010239: chloroplast mRNA processing2.58E-03
70GO:0043481: anthocyanin accumulation in tissues in response to UV light2.58E-03
71GO:0006072: glycerol-3-phosphate metabolic process2.58E-03
72GO:0010306: rhamnogalacturonan II biosynthetic process2.58E-03
73GO:0045017: glycerolipid biosynthetic process2.58E-03
74GO:0080147: root hair cell development3.08E-03
75GO:0051302: regulation of cell division3.40E-03
76GO:0048629: trichome patterning3.48E-03
77GO:1900864: mitochondrial RNA modification3.48E-03
78GO:0051322: anaphase3.48E-03
79GO:0030104: water homeostasis3.48E-03
80GO:0006221: pyrimidine nucleotide biosynthetic process3.48E-03
81GO:0006021: inositol biosynthetic process3.48E-03
82GO:0006346: methylation-dependent chromatin silencing3.48E-03
83GO:0006808: regulation of nitrogen utilization3.48E-03
84GO:0006479: protein methylation3.48E-03
85GO:0030001: metal ion transport3.73E-03
86GO:0003333: amino acid transmembrane transport3.74E-03
87GO:0009793: embryo development ending in seed dormancy3.91E-03
88GO:2000022: regulation of jasmonic acid mediated signaling pathway4.09E-03
89GO:0032876: negative regulation of DNA endoreduplication4.46E-03
90GO:0030308: negative regulation of cell growth4.46E-03
91GO:0010375: stomatal complex patterning4.46E-03
92GO:0080110: sporopollenin biosynthetic process4.46E-03
93GO:0016131: brassinosteroid metabolic process4.46E-03
94GO:0048497: maintenance of floral organ identity4.46E-03
95GO:0040008: regulation of growth4.49E-03
96GO:0042127: regulation of cell proliferation4.86E-03
97GO:0016554: cytidine to uridine editing5.53E-03
98GO:1902456: regulation of stomatal opening5.53E-03
99GO:0048831: regulation of shoot system development5.53E-03
100GO:0010315: auxin efflux5.53E-03
101GO:0003006: developmental process involved in reproduction5.53E-03
102GO:0009643: photosynthetic acclimation5.53E-03
103GO:0006014: D-ribose metabolic process5.53E-03
104GO:0010118: stomatal movement5.70E-03
105GO:0008033: tRNA processing5.70E-03
106GO:0010087: phloem or xylem histogenesis5.70E-03
107GO:0009739: response to gibberellin5.72E-03
108GO:0010305: leaf vascular tissue pattern formation6.15E-03
109GO:0006364: rRNA processing6.40E-03
110GO:2000037: regulation of stomatal complex patterning6.67E-03
111GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity6.67E-03
112GO:0010310: regulation of hydrogen peroxide metabolic process6.67E-03
113GO:2000067: regulation of root morphogenesis6.67E-03
114GO:0071470: cellular response to osmotic stress6.67E-03
115GO:2000033: regulation of seed dormancy process6.67E-03
116GO:0048509: regulation of meristem development6.67E-03
117GO:0048825: cotyledon development7.10E-03
118GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.90E-03
119GO:0006401: RNA catabolic process7.90E-03
120GO:0010374: stomatal complex development7.90E-03
121GO:0006955: immune response7.90E-03
122GO:0007050: cell cycle arrest7.90E-03
123GO:0006821: chloride transport7.90E-03
124GO:0048437: floral organ development7.90E-03
125GO:0015937: coenzyme A biosynthetic process7.90E-03
126GO:0010103: stomatal complex morphogenesis7.90E-03
127GO:0031047: gene silencing by RNA8.13E-03
128GO:0048367: shoot system development8.26E-03
129GO:0009826: unidimensional cell growth8.85E-03
130GO:0052543: callose deposition in cell wall9.20E-03
131GO:0034968: histone lysine methylation9.20E-03
132GO:0009938: negative regulation of gibberellic acid mediated signaling pathway9.20E-03
133GO:0009787: regulation of abscisic acid-activated signaling pathway9.20E-03
134GO:0009642: response to light intensity9.20E-03
135GO:0048766: root hair initiation9.20E-03
136GO:0055075: potassium ion homeostasis9.20E-03
137GO:0009827: plant-type cell wall modification1.06E-02
138GO:0019430: removal of superoxide radicals1.06E-02
139GO:0007186: G-protein coupled receptor signaling pathway1.06E-02
140GO:0010233: phloem transport1.06E-02
141GO:0010052: guard cell differentiation1.06E-02
142GO:0010497: plasmodesmata-mediated intercellular transport1.06E-02
143GO:0032544: plastid translation1.06E-02
144GO:0007389: pattern specification process1.06E-02
145GO:0010027: thylakoid membrane organization1.10E-02
146GO:0010029: regulation of seed germination1.17E-02
147GO:0048507: meristem development1.20E-02
148GO:0000373: Group II intron splicing1.20E-02
149GO:0048589: developmental growth1.20E-02
150GO:0000902: cell morphogenesis1.20E-02
151GO:0042761: very long-chain fatty acid biosynthetic process1.35E-02
152GO:2000280: regulation of root development1.35E-02
153GO:0006349: regulation of gene expression by genetic imprinting1.35E-02
154GO:0008356: asymmetric cell division1.35E-02
155GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.37E-02
156GO:0048481: plant ovule development1.45E-02
157GO:0016441: posttranscriptional gene silencing1.51E-02
158GO:0010048: vernalization response1.51E-02
159GO:0006535: cysteine biosynthetic process from serine1.51E-02
160GO:0045036: protein targeting to chloroplast1.51E-02
161GO:0006811: ion transport1.60E-02
162GO:0009682: induced systemic resistance1.67E-02
163GO:0015770: sucrose transport1.67E-02
164GO:1903507: negative regulation of nucleic acid-templated transcription1.67E-02
165GO:0009750: response to fructose1.67E-02
166GO:0048765: root hair cell differentiation1.67E-02
167GO:0006865: amino acid transport1.76E-02
168GO:0008361: regulation of cell size1.84E-02
169GO:0006790: sulfur compound metabolic process1.84E-02
170GO:0012501: programmed cell death1.84E-02
171GO:0009867: jasmonic acid mediated signaling pathway1.84E-02
172GO:0010152: pollen maturation1.84E-02
173GO:0045037: protein import into chloroplast stroma1.84E-02
174GO:0010582: floral meristem determinacy1.84E-02
175GO:0010075: regulation of meristem growth2.02E-02
176GO:0030048: actin filament-based movement2.02E-02
177GO:0010102: lateral root morphogenesis2.02E-02
178GO:0009691: cytokinin biosynthetic process2.02E-02
179GO:0009451: RNA modification2.08E-02
180GO:0048467: gynoecium development2.20E-02
181GO:0010020: chloroplast fission2.20E-02
182GO:0006270: DNA replication initiation2.20E-02
183GO:0009901: anther dehiscence2.38E-02
184GO:0046854: phosphatidylinositol phosphorylation2.38E-02
185GO:0048364: root development2.48E-02
186GO:0008380: RNA splicing2.52E-02
187GO:0006833: water transport2.58E-02
188GO:0006636: unsaturated fatty acid biosynthetic process2.58E-02
189GO:0019344: cysteine biosynthetic process2.77E-02
190GO:0009863: salicylic acid mediated signaling pathway2.77E-02
191GO:0010187: negative regulation of seed germination2.77E-02
192GO:2000377: regulation of reactive oxygen species metabolic process2.77E-02
193GO:0006351: transcription, DNA-templated2.86E-02
194GO:0031347: regulation of defense response2.87E-02
195GO:0019953: sexual reproduction2.98E-02
196GO:0006874: cellular calcium ion homeostasis2.98E-02
197GO:0010073: meristem maintenance2.98E-02
198GO:0006825: copper ion transport2.98E-02
199GO:0010431: seed maturation3.18E-02
200GO:0006306: DNA methylation3.18E-02
201GO:0016998: cell wall macromolecule catabolic process3.18E-02
202GO:0071215: cellular response to abscisic acid stimulus3.61E-02
203GO:0010082: regulation of root meristem growth3.61E-02
204GO:0007275: multicellular organism development3.64E-02
205GO:0010584: pollen exine formation3.83E-02
206GO:0048443: stamen development3.83E-02
207GO:0070417: cellular response to cold4.06E-02
208GO:0009740: gibberellic acid mediated signaling pathway4.28E-02
209GO:0042631: cellular response to water deprivation4.29E-02
210GO:0000226: microtubule cytoskeleton organization4.29E-02
211GO:0042335: cuticle development4.29E-02
212GO:0080022: primary root development4.29E-02
213GO:0010501: RNA secondary structure unwinding4.29E-02
214GO:0009741: response to brassinosteroid4.53E-02
215GO:0010268: brassinosteroid homeostasis4.53E-02
216GO:0009960: endosperm development4.53E-02
217GO:0009958: positive gravitropism4.53E-02
218GO:0048868: pollen tube development4.53E-02
219GO:0080167: response to karrikin4.54E-02
220GO:0007018: microtubule-based movement4.76E-02
221GO:0051726: regulation of cell cycle4.80E-02
RankGO TermAdjusted P value
1GO:0052834: inositol monophosphate phosphatase activity0.00E+00
2GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity0.00E+00
3GO:0016763: transferase activity, transferring pentosyl groups0.00E+00
4GO:0008859: exoribonuclease II activity0.00E+00
5GO:0071633: dihydroceramidase activity0.00E+00
6GO:0004401: histidinol-phosphatase activity0.00E+00
7GO:0003723: RNA binding1.05E-04
8GO:0004930: G-protein coupled receptor activity1.41E-04
9GO:0004016: adenylate cyclase activity5.06E-04
10GO:0004400: histidinol-phosphate transaminase activity5.06E-04
11GO:1905201: gibberellin transmembrane transporter activity5.06E-04
12GO:0004632: phosphopantothenate--cysteine ligase activity5.06E-04
13GO:0042834: peptidoglycan binding5.06E-04
14GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.06E-04
15GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity5.06E-04
16GO:0016274: protein-arginine N-methyltransferase activity5.06E-04
17GO:0008395: steroid hydroxylase activity5.06E-04
18GO:0052381: tRNA dimethylallyltransferase activity5.06E-04
19GO:0010347: L-galactose-1-phosphate phosphatase activity5.06E-04
20GO:0003727: single-stranded RNA binding5.92E-04
21GO:0004809: tRNA (guanine-N2-)-methyltransferase activity1.09E-03
22GO:0052832: inositol monophosphate 3-phosphatase activity1.09E-03
23GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.09E-03
24GO:0008805: carbon-monoxide oxygenase activity1.09E-03
25GO:0008934: inositol monophosphate 1-phosphatase activity1.09E-03
26GO:0008493: tetracycline transporter activity1.09E-03
27GO:0052833: inositol monophosphate 4-phosphatase activity1.09E-03
28GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.09E-03
29GO:0009884: cytokinin receptor activity1.09E-03
30GO:0042389: omega-3 fatty acid desaturase activity1.09E-03
31GO:0017150: tRNA dihydrouridine synthase activity1.78E-03
32GO:0016805: dipeptidase activity1.78E-03
33GO:0005034: osmosensor activity1.78E-03
34GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.78E-03
35GO:0003725: double-stranded RNA binding1.96E-03
36GO:0004519: endonuclease activity2.32E-03
37GO:0001872: (1->3)-beta-D-glucan binding2.58E-03
38GO:0009041: uridylate kinase activity2.58E-03
39GO:0010011: auxin binding3.48E-03
40GO:0010328: auxin influx transmembrane transporter activity3.48E-03
41GO:0005253: anion channel activity3.48E-03
42GO:0016279: protein-lysine N-methyltransferase activity3.48E-03
43GO:0004888: transmembrane signaling receptor activity4.46E-03
44GO:0030570: pectate lyase activity4.47E-03
45GO:0018024: histone-lysine N-methyltransferase activity5.27E-03
46GO:0005247: voltage-gated chloride channel activity5.53E-03
47GO:0003688: DNA replication origin binding5.53E-03
48GO:0004784: superoxide dismutase activity5.53E-03
49GO:0004124: cysteine synthase activity6.67E-03
50GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.67E-03
51GO:0016832: aldehyde-lyase activity6.67E-03
52GO:0004747: ribokinase activity6.67E-03
53GO:0019900: kinase binding6.67E-03
54GO:0019901: protein kinase binding7.10E-03
55GO:0008168: methyltransferase activity8.85E-03
56GO:0008865: fructokinase activity9.20E-03
57GO:0003724: RNA helicase activity1.06E-02
58GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.06E-02
59GO:0000989: transcription factor activity, transcription factor binding1.20E-02
60GO:0005515: protein binding1.24E-02
61GO:0019843: rRNA binding1.34E-02
62GO:0009672: auxin:proton symporter activity1.35E-02
63GO:0004673: protein histidine kinase activity1.51E-02
64GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.58E-02
65GO:0003700: transcription factor activity, sequence-specific DNA binding1.59E-02
66GO:0004222: metalloendopeptidase activity1.60E-02
67GO:0008515: sucrose transmembrane transporter activity1.67E-02
68GO:0004871: signal transducer activity1.83E-02
69GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.84E-02
70GO:0003677: DNA binding1.97E-02
71GO:0000155: phosphorelay sensor kinase activity2.02E-02
72GO:0009982: pseudouridine synthase activity2.02E-02
73GO:0000175: 3'-5'-exoribonuclease activity2.02E-02
74GO:0010329: auxin efflux transmembrane transporter activity2.02E-02
75GO:0004022: alcohol dehydrogenase (NAD) activity2.02E-02
76GO:0031072: heat shock protein binding2.02E-02
77GO:0003774: motor activity2.20E-02
78GO:0046872: metal ion binding2.23E-02
79GO:0004970: ionotropic glutamate receptor activity2.38E-02
80GO:0051119: sugar transmembrane transporter activity2.38E-02
81GO:0005217: intracellular ligand-gated ion channel activity2.38E-02
82GO:0004190: aspartic-type endopeptidase activity2.38E-02
83GO:0043621: protein self-association2.57E-02
84GO:0015293: symporter activity2.67E-02
85GO:0003714: transcription corepressor activity2.77E-02
86GO:0043424: protein histidine kinase binding2.98E-02
87GO:0043565: sequence-specific DNA binding3.13E-02
88GO:0004540: ribonuclease activity3.18E-02
89GO:0003690: double-stranded DNA binding3.31E-02
90GO:0003777: microtubule motor activity3.54E-02
91GO:0015171: amino acid transmembrane transporter activity3.54E-02
92GO:0008289: lipid binding3.78E-02
93GO:0003779: actin binding4.41E-02
94GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity4.53E-02
95GO:0001085: RNA polymerase II transcription factor binding4.53E-02
96GO:0050662: coenzyme binding4.76E-02
97GO:0010181: FMN binding4.76E-02
98GO:0008026: ATP-dependent helicase activity4.80E-02
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Gene type



Gene DE type