co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G69700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006573: valine metabolic process	0.00E+00
2	GO:0033528: S-methylmethionine cycle	0.00E+00
3	GO:0008298: intracellular mRNA localization	0.00E+00
4	GO:1905157: positive regulation of photosynthesis	0.00E+00
5	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
6	GO:0033494: ferulate metabolic process	0.00E+00
7	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
8	GO:0009904: chloroplast accumulation movement	5.09E-05
9	GO:0009903: chloroplast avoidance movement	1.04E-04
10	GO:0009690: cytokinin metabolic process	1.76E-04
11	GO:0051180: vitamin transport	2.09E-04
12	GO:1902025: nitrate import	2.09E-04
13	GO:0030974: thiamine pyrophosphate transport	2.09E-04
14	GO:0046467: membrane lipid biosynthetic process	2.09E-04
15	GO:0080051: cutin transport	2.09E-04
16	GO:0006551: leucine metabolic process	2.09E-04
17	GO:0046167: glycerol-3-phosphate biosynthetic process	2.09E-04
18	GO:0043007: maintenance of rDNA	2.09E-04
19	GO:0090548: response to nitrate starvation	2.09E-04
20	GO:0010362: negative regulation of anion channel activity by blue light	2.09E-04
21	GO:0015969: guanosine tetraphosphate metabolic process	2.09E-04
22	GO:0009821: alkaloid biosynthetic process	2.65E-04
23	GO:0006098: pentose-phosphate shunt	2.65E-04
24	GO:0006898: receptor-mediated endocytosis	4.66E-04
25	GO:0015893: drug transport	4.66E-04
26	GO:0006650: glycerophospholipid metabolic process	4.66E-04
27	GO:0010541: acropetal auxin transport	4.66E-04
28	GO:0010155: regulation of proton transport	4.66E-04
29	GO:0015908: fatty acid transport	4.66E-04
30	GO:0006094: gluconeogenesis	5.58E-04
31	GO:0009637: response to blue light	6.12E-04
32	GO:0010160: formation of animal organ boundary	7.59E-04
33	GO:0006696: ergosterol biosynthetic process	7.59E-04
34	GO:0046168: glycerol-3-phosphate catabolic process	7.59E-04
35	GO:0010114: response to red light	8.42E-04
36	GO:1990019: protein storage vacuole organization	1.08E-03
37	GO:0042823: pyridoxal phosphate biosynthetic process	1.08E-03
38	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.08E-03
39	GO:0006072: glycerol-3-phosphate metabolic process	1.08E-03
40	GO:0009658: chloroplast organization	1.27E-03
41	GO:0019722: calcium-mediated signaling	1.34E-03
42	GO:0008295: spermidine biosynthetic process	1.44E-03
43	GO:0032366: intracellular sterol transport	1.44E-03
44	GO:0031122: cytoplasmic microtubule organization	1.44E-03
45	GO:0006021: inositol biosynthetic process	1.44E-03
46	GO:0071483: cellular response to blue light	1.44E-03
47	GO:0010222: stem vascular tissue pattern formation	1.44E-03
48	GO:0015689: molybdate ion transport	1.44E-03
49	GO:0009765: photosynthesis, light harvesting	1.44E-03
50	GO:0016123: xanthophyll biosynthetic process	1.83E-03
51	GO:0006465: signal peptide processing	1.83E-03
52	GO:0044550: secondary metabolite biosynthetic process	2.00E-03
53	GO:0032502: developmental process	2.21E-03
54	GO:0046855: inositol phosphate dephosphorylation	2.26E-03
55	GO:0060918: auxin transport	2.26E-03
56	GO:0009643: photosynthetic acclimation	2.26E-03
57	GO:0007267: cell-cell signaling	2.66E-03
58	GO:0009082: branched-chain amino acid biosynthetic process	2.71E-03
59	GO:0009099: valine biosynthetic process	2.71E-03
60	GO:0009554: megasporogenesis	2.71E-03
61	GO:0009854: oxidative photosynthetic carbon pathway	2.71E-03
62	GO:0010019: chloroplast-nucleus signaling pathway	2.71E-03
63	GO:0009648: photoperiodism	2.71E-03
64	GO:0009769: photosynthesis, light harvesting in photosystem II	3.20E-03
65	GO:0009645: response to low light intensity stimulus	3.20E-03
66	GO:0006400: tRNA modification	3.20E-03
67	GO:1900056: negative regulation of leaf senescence	3.20E-03
68	GO:0009231: riboflavin biosynthetic process	3.71E-03
69	GO:0019827: stem cell population maintenance	3.71E-03
70	GO:0018298: protein-chromophore linkage	3.88E-03
71	GO:0000160: phosphorelay signal transduction system	4.08E-03
72	GO:0009657: plastid organization	4.24E-03
73	GO:0009097: isoleucine biosynthetic process	4.24E-03
74	GO:0009932: cell tip growth	4.24E-03
75	GO:0010218: response to far red light	4.28E-03
76	GO:0009638: phototropism	5.38E-03
77	GO:0009086: methionine biosynthetic process	5.38E-03
78	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.38E-03
79	GO:0010380: regulation of chlorophyll biosynthetic process	5.38E-03
80	GO:0019538: protein metabolic process	5.99E-03
81	GO:0009688: abscisic acid biosynthetic process	5.99E-03
82	GO:0009641: shade avoidance	5.99E-03
83	GO:0010192: mucilage biosynthetic process	5.99E-03
84	GO:0043085: positive regulation of catalytic activity	6.62E-03
85	GO:0016485: protein processing	6.62E-03
86	GO:0008361: regulation of cell size	7.28E-03
87	GO:0006790: sulfur compound metabolic process	7.28E-03
88	GO:0009785: blue light signaling pathway	7.96E-03
89	GO:0009767: photosynthetic electron transport chain	7.96E-03
90	GO:0010588: cotyledon vascular tissue pattern formation	7.96E-03
91	GO:0007015: actin filament organization	8.66E-03
92	GO:0010223: secondary shoot formation	8.66E-03
93	GO:0009887: animal organ morphogenesis	8.66E-03
94	GO:0010540: basipetal auxin transport	8.66E-03
95	GO:0010143: cutin biosynthetic process	8.66E-03
96	GO:0006857: oligopeptide transport	9.14E-03
97	GO:0019853: L-ascorbic acid biosynthetic process	9.37E-03
98	GO:0046854: phosphatidylinositol phosphorylation	9.37E-03
99	GO:0042343: indole glucosinolate metabolic process	9.37E-03
100	GO:0042753: positive regulation of circadian rhythm	1.01E-02
101	GO:0006833: water transport	1.01E-02
102	GO:0006096: glycolytic process	1.01E-02
103	GO:0009768: photosynthesis, light harvesting in photosystem I	1.17E-02
104	GO:0048511: rhythmic process	1.25E-02
105	GO:0098542: defense response to other organism	1.25E-02
106	GO:0019915: lipid storage	1.25E-02
107	GO:0009269: response to desiccation	1.25E-02
108	GO:0055114: oxidation-reduction process	1.31E-02
109	GO:0019748: secondary metabolic process	1.33E-02
110	GO:0032259: methylation	1.35E-02
111	GO:0009294: DNA mediated transformation	1.41E-02
112	GO:0071369: cellular response to ethylene stimulus	1.41E-02
113	GO:0006817: phosphate ion transport	1.50E-02
114	GO:0009306: protein secretion	1.50E-02
115	GO:0048443: stamen development	1.50E-02
116	GO:0016117: carotenoid biosynthetic process	1.59E-02
117	GO:0009058: biosynthetic process	1.61E-02
118	GO:0034220: ion transmembrane transport	1.68E-02
119	GO:0009958: positive gravitropism	1.77E-02
120	GO:0006520: cellular amino acid metabolic process	1.77E-02
121	GO:0010182: sugar mediated signaling pathway	1.77E-02
122	GO:0007059: chromosome segregation	1.86E-02
123	GO:0008654: phospholipid biosynthetic process	1.96E-02
124	GO:0071554: cell wall organization or biogenesis	2.06E-02
125	GO:0010583: response to cyclopentenone	2.15E-02
126	GO:0007264: small GTPase mediated signal transduction	2.15E-02
127	GO:0009639: response to red or far red light	2.36E-02
128	GO:0010411: xyloglucan metabolic process	3.00E-02
129	GO:0015995: chlorophyll biosynthetic process	3.00E-02
130	GO:0030244: cellulose biosynthetic process	3.23E-02
131	GO:0006811: ion transport	3.46E-02
132	GO:0006499: N-terminal protein myristoylation	3.46E-02
133	GO:0048527: lateral root development	3.58E-02
134	GO:0010119: regulation of stomatal movement	3.58E-02
135	GO:0007568: aging	3.58E-02
136	GO:0009910: negative regulation of flower development	3.58E-02
137	GO:0009853: photorespiration	3.82E-02
138	GO:0006810: transport	3.87E-02
139	GO:0034599: cellular response to oxidative stress	3.94E-02
140	GO:0006468: protein phosphorylation	3.96E-02
141	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.18E-02
142	GO:0006839: mitochondrial transport	4.19E-02
143	GO:0046777: protein autophosphorylation	4.32E-02
144	GO:0009640: photomorphogenesis	4.57E-02
145	GO:0009926: auxin polar transport	4.57E-02
146	GO:0042546: cell wall biogenesis	4.71E-02
147	GO:0009644: response to high light intensity	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0046905: phytoene synthase activity	0.00E+00
2	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
3	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
4	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
5	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
6	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
7	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
8	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
9	GO:0004332: fructose-bisphosphate aldolase activity	7.50E-05
10	GO:0051996: squalene synthase activity	2.09E-04
11	GO:0008568: microtubule-severing ATPase activity	2.09E-04
12	GO:0016618: hydroxypyruvate reductase activity	2.09E-04
13	GO:0003984: acetolactate synthase activity	2.09E-04
14	GO:0015245: fatty acid transporter activity	2.09E-04
15	GO:0004328: formamidase activity	2.09E-04
16	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.09E-04
17	GO:0035671: enone reductase activity	2.09E-04
18	GO:0046906: tetrapyrrole binding	2.09E-04
19	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.09E-04
20	GO:0030794: (S)-coclaurine-N-methyltransferase activity	2.09E-04
21	GO:0090422: thiamine pyrophosphate transporter activity	2.09E-04
22	GO:0016844: strictosidine synthase activity	3.16E-04
23	GO:0008728: GTP diphosphokinase activity	4.66E-04
24	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	4.66E-04
25	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	4.66E-04
26	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	4.66E-04
27	GO:0004766: spermidine synthase activity	4.66E-04
28	GO:0052832: inositol monophosphate 3-phosphatase activity	4.66E-04
29	GO:0008934: inositol monophosphate 1-phosphatase activity	4.66E-04
30	GO:0052833: inositol monophosphate 4-phosphatase activity	4.66E-04
31	GO:0003935: GTP cyclohydrolase II activity	7.59E-04
32	GO:0030267: glyoxylate reductase (NADP) activity	7.59E-04
33	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.59E-04
34	GO:0050734: hydroxycinnamoyltransferase activity	7.59E-04
35	GO:0022890: inorganic cation transmembrane transporter activity	1.08E-03
36	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.08E-03
37	GO:0009882: blue light photoreceptor activity	1.08E-03
38	GO:0004672: protein kinase activity	1.16E-03
39	GO:0016788: hydrolase activity, acting on ester bonds	1.31E-03
40	GO:0015098: molybdate ion transmembrane transporter activity	1.44E-03
41	GO:0042277: peptide binding	1.44E-03
42	GO:0080032: methyl jasmonate esterase activity	1.44E-03
43	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.83E-03
44	GO:0052689: carboxylic ester hydrolase activity	2.05E-03
45	GO:0035673: oligopeptide transmembrane transporter activity	2.26E-03
46	GO:0080030: methyl indole-3-acetate esterase activity	2.26E-03
47	GO:0000293: ferric-chelate reductase activity	2.26E-03
48	GO:0051753: mannan synthase activity	2.71E-03
49	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.71E-03
50	GO:0016491: oxidoreductase activity	3.14E-03
51	GO:0019899: enzyme binding	3.20E-03
52	GO:0071949: FAD binding	4.80E-03
53	GO:0015386: potassium:proton antiporter activity	6.62E-03
54	GO:0015198: oligopeptide transporter activity	7.28E-03
55	GO:0051287: NAD binding	7.66E-03
56	GO:0010329: auxin efflux transmembrane transporter activity	7.96E-03
57	GO:0008081: phosphoric diester hydrolase activity	7.96E-03
58	GO:0005315: inorganic phosphate transmembrane transporter activity	7.96E-03
59	GO:0000155: phosphorelay sensor kinase activity	7.96E-03
60	GO:0004565: beta-galactosidase activity	7.96E-03
61	GO:0008146: sulfotransferase activity	9.37E-03
62	GO:0031409: pigment binding	1.01E-02
63	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.04E-02
64	GO:0004871: signal transducer activity	1.16E-02
65	GO:0015079: potassium ion transmembrane transporter activity	1.17E-02
66	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.21E-02
67	GO:0003727: single-stranded RNA binding	1.50E-02
68	GO:0008080: N-acetyltransferase activity	1.77E-02
69	GO:0010181: FMN binding	1.86E-02
70	GO:0015299: solute:proton antiporter activity	1.86E-02
71	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.06E-02
72	GO:0000156: phosphorelay response regulator activity	2.25E-02
73	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.46E-02
74	GO:0016597: amino acid binding	2.57E-02
75	GO:0016413: O-acetyltransferase activity	2.57E-02
76	GO:0015250: water channel activity	2.67E-02
77	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.68E-02
78	GO:0042802: identical protein binding	2.68E-02
79	GO:0016168: chlorophyll binding	2.78E-02
80	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.00E-02
81	GO:0008168: methyltransferase activity	3.15E-02
82	GO:0030145: manganese ion binding	3.58E-02
83	GO:0004674: protein serine/threonine kinase activity	3.93E-02
84	GO:0005507: copper ion binding	4.54E-02
85	GO:0019825: oxygen binding	4.54E-02
86	GO:0004185: serine-type carboxypeptidase activity	4.57E-02
87	GO:0043621: protein self-association	4.84E-02
88	GO:0015293: symporter activity	4.97E-02