Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G68540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071474: cellular hyperosmotic response0.00E+00
2GO:0009249: protein lipoylation0.00E+00
3GO:0002184: cytoplasmic translational termination0.00E+00
4GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
5GO:0090470: shoot organ boundary specification0.00E+00
6GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
7GO:0042821: pyridoxal biosynthetic process0.00E+00
8GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
9GO:0009106: lipoate metabolic process0.00E+00
10GO:0006114: glycerol biosynthetic process0.00E+00
11GO:0090279: regulation of calcium ion import0.00E+00
12GO:0042820: vitamin B6 catabolic process0.00E+00
13GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly4.34E-05
14GO:0045038: protein import into chloroplast thylakoid membrane1.21E-04
15GO:0015995: chlorophyll biosynthetic process1.21E-04
16GO:0015671: oxygen transport3.52E-04
17GO:0000481: maturation of 5S rRNA3.52E-04
18GO:0015801: aromatic amino acid transport3.52E-04
19GO:0043686: co-translational protein modification3.52E-04
20GO:1902458: positive regulation of stomatal opening3.52E-04
21GO:0034337: RNA folding3.52E-04
22GO:0048363: mucilage pectin metabolic process3.52E-04
23GO:0009443: pyridoxal 5'-phosphate salvage3.52E-04
24GO:0048564: photosystem I assembly3.84E-04
25GO:0071482: cellular response to light stimulus4.70E-04
26GO:0000256: allantoin catabolic process7.67E-04
27GO:0071668: plant-type cell wall assembly7.67E-04
28GO:0080183: response to photooxidative stress7.67E-04
29GO:1903426: regulation of reactive oxygen species biosynthetic process7.67E-04
30GO:0051262: protein tetramerization7.67E-04
31GO:0010275: NAD(P)H dehydrogenase complex assembly7.67E-04
32GO:0006435: threonyl-tRNA aminoacylation7.67E-04
33GO:1900871: chloroplast mRNA modification7.67E-04
34GO:0010027: thylakoid membrane organization8.42E-04
35GO:0009089: lysine biosynthetic process via diaminopimelate8.95E-04
36GO:0016024: CDP-diacylglycerol biosynthetic process1.02E-03
37GO:0009817: defense response to fungus, incompatible interaction1.17E-03
38GO:0015940: pantothenate biosynthetic process1.24E-03
39GO:0044375: regulation of peroxisome size1.24E-03
40GO:0005977: glycogen metabolic process1.24E-03
41GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.24E-03
42GO:0010136: ureide catabolic process1.24E-03
43GO:0010207: photosystem II assembly1.30E-03
44GO:0015979: photosynthesis1.68E-03
45GO:0009735: response to cytokinin1.73E-03
46GO:2001141: regulation of RNA biosynthetic process1.79E-03
47GO:0010371: regulation of gibberellin biosynthetic process1.79E-03
48GO:0009102: biotin biosynthetic process1.79E-03
49GO:0009152: purine ribonucleotide biosynthetic process1.79E-03
50GO:0046653: tetrahydrofolate metabolic process1.79E-03
51GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.79E-03
52GO:0006145: purine nucleobase catabolic process1.79E-03
53GO:0009052: pentose-phosphate shunt, non-oxidative branch1.79E-03
54GO:0033014: tetrapyrrole biosynthetic process1.79E-03
55GO:0006424: glutamyl-tRNA aminoacylation1.79E-03
56GO:1901332: negative regulation of lateral root development1.79E-03
57GO:0048511: rhythmic process2.18E-03
58GO:0010021: amylopectin biosynthetic process2.40E-03
59GO:0009765: photosynthesis, light harvesting2.40E-03
60GO:0022622: root system development2.40E-03
61GO:0031365: N-terminal protein amino acid modification3.07E-03
62GO:0009107: lipoate biosynthetic process3.07E-03
63GO:0016123: xanthophyll biosynthetic process3.07E-03
64GO:0000304: response to singlet oxygen3.07E-03
65GO:0016120: carotene biosynthetic process3.07E-03
66GO:0046907: intracellular transport3.07E-03
67GO:0032543: mitochondrial translation3.07E-03
68GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.79E-03
69GO:0006655: phosphatidylglycerol biosynthetic process3.79E-03
70GO:0010190: cytochrome b6f complex assembly3.79E-03
71GO:0009658: chloroplast organization4.08E-03
72GO:0030488: tRNA methylation4.57E-03
73GO:0032880: regulation of protein localization5.40E-03
74GO:0009395: phospholipid catabolic process5.40E-03
75GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.40E-03
76GO:0006605: protein targeting6.27E-03
77GO:0032508: DNA duplex unwinding6.27E-03
78GO:2000070: regulation of response to water deprivation6.27E-03
79GO:0000105: histidine biosynthetic process6.27E-03
80GO:0016559: peroxisome fission6.27E-03
81GO:0042255: ribosome assembly6.27E-03
82GO:0006353: DNA-templated transcription, termination6.27E-03
83GO:0032544: plastid translation7.19E-03
84GO:0017004: cytochrome complex assembly7.19E-03
85GO:0022900: electron transport chain7.19E-03
86GO:0015996: chlorophyll catabolic process7.19E-03
87GO:0007186: G-protein coupled receptor signaling pathway7.19E-03
88GO:0016311: dephosphorylation7.91E-03
89GO:0006783: heme biosynthetic process8.16E-03
90GO:0009821: alkaloid biosynthetic process8.16E-03
91GO:0019432: triglyceride biosynthetic process8.16E-03
92GO:0010206: photosystem II repair8.16E-03
93GO:0006779: porphyrin-containing compound biosynthetic process9.17E-03
94GO:0048354: mucilage biosynthetic process involved in seed coat development9.17E-03
95GO:0007568: aging9.64E-03
96GO:0006352: DNA-templated transcription, initiation1.13E-02
97GO:0009773: photosynthetic electron transport in photosystem I1.13E-02
98GO:0019684: photosynthesis, light reaction1.13E-02
99GO:0008285: negative regulation of cell proliferation1.13E-02
100GO:0005983: starch catabolic process1.25E-02
101GO:0045037: protein import into chloroplast stroma1.25E-02
102GO:0006631: fatty acid metabolic process1.26E-02
103GO:0009725: response to hormone1.37E-02
104GO:2000012: regulation of auxin polar transport1.37E-02
105GO:0009266: response to temperature stimulus1.49E-02
106GO:0010143: cutin biosynthetic process1.49E-02
107GO:0007031: peroxisome organization1.61E-02
108GO:0006636: unsaturated fatty acid biosynthetic process1.74E-02
109GO:0000162: tryptophan biosynthetic process1.74E-02
110GO:0006412: translation1.80E-02
111GO:0006289: nucleotide-excision repair1.88E-02
112GO:0010073: meristem maintenance2.01E-02
113GO:0007017: microtubule-based process2.01E-02
114GO:0003333: amino acid transmembrane transport2.15E-02
115GO:0061077: chaperone-mediated protein folding2.15E-02
116GO:0031408: oxylipin biosynthetic process2.15E-02
117GO:0080092: regulation of pollen tube growth2.29E-02
118GO:0016226: iron-sulfur cluster assembly2.29E-02
119GO:0055114: oxidation-reduction process2.36E-02
120GO:0010227: floral organ abscission2.44E-02
121GO:0009306: protein secretion2.59E-02
122GO:0016117: carotenoid biosynthetic process2.74E-02
123GO:0051028: mRNA transport2.74E-02
124GO:0008284: positive regulation of cell proliferation2.74E-02
125GO:0000271: polysaccharide biosynthetic process2.90E-02
126GO:0042335: cuticle development2.90E-02
127GO:0010182: sugar mediated signaling pathway3.06E-02
128GO:0045489: pectin biosynthetic process3.06E-02
129GO:0009958: positive gravitropism3.06E-02
130GO:0042752: regulation of circadian rhythm3.22E-02
131GO:0019252: starch biosynthetic process3.39E-02
132GO:0009058: biosynthetic process3.47E-02
133GO:0032259: methylation3.54E-02
134GO:0015031: protein transport3.63E-02
135GO:0032502: developmental process3.72E-02
136GO:0006633: fatty acid biosynthetic process4.13E-02
137GO:0010286: heat acclimation4.25E-02
138GO:0016126: sterol biosynthetic process4.62E-02
139GO:0009451: RNA modification4.63E-02
140GO:0005975: carbohydrate metabolic process4.84E-02
RankGO TermAdjusted P value
1GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
2GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
3GO:0005048: signal sequence binding0.00E+00
4GO:0004076: biotin synthase activity0.00E+00
5GO:0043136: glycerol-3-phosphatase activity0.00E+00
6GO:0000121: glycerol-1-phosphatase activity0.00E+00
7GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
8GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
9GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
10GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
11GO:0019144: ADP-sugar diphosphatase activity0.00E+00
12GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
13GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
14GO:0045435: lycopene epsilon cyclase activity0.00E+00
15GO:0050613: delta14-sterol reductase activity0.00E+00
16GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase5.59E-06
17GO:0070402: NADPH binding1.97E-05
18GO:0016851: magnesium chelatase activity4.34E-05
19GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor7.72E-05
20GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.74E-04
21GO:0005080: protein kinase C binding3.52E-04
22GO:0016784: 3-mercaptopyruvate sulfurtransferase activity3.52E-04
23GO:0005344: oxygen transporter activity3.52E-04
24GO:0005227: calcium activated cation channel activity3.52E-04
25GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.52E-04
26GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.52E-04
27GO:0080042: ADP-glucose pyrophosphohydrolase activity3.52E-04
28GO:0050308: sugar-phosphatase activity3.52E-04
29GO:0004856: xylulokinase activity3.52E-04
30GO:0004325: ferrochelatase activity3.52E-04
31GO:0009496: plastoquinol--plastocyanin reductase activity3.52E-04
32GO:0042586: peptide deformylase activity3.52E-04
33GO:0019203: carbohydrate phosphatase activity3.52E-04
34GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.26E-04
35GO:0048038: quinone binding5.27E-04
36GO:0017118: lipoyltransferase activity7.67E-04
37GO:0042389: omega-3 fatty acid desaturase activity7.67E-04
38GO:0080041: ADP-ribose pyrophosphohydrolase activity7.67E-04
39GO:0016415: octanoyltransferase activity7.67E-04
40GO:0015173: aromatic amino acid transmembrane transporter activity7.67E-04
41GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity7.67E-04
42GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity7.67E-04
43GO:0004829: threonine-tRNA ligase activity7.67E-04
44GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity7.67E-04
45GO:0019156: isoamylase activity7.67E-04
46GO:0016788: hydrolase activity, acting on ester bonds9.46E-04
47GO:0004751: ribose-5-phosphate isomerase activity1.24E-03
48GO:0030267: glyoxylate reductase (NADP) activity1.24E-03
49GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.24E-03
50GO:0008864: formyltetrahydrofolate deformylase activity1.24E-03
51GO:0004180: carboxypeptidase activity1.24E-03
52GO:0005504: fatty acid binding1.24E-03
53GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.24E-03
54GO:0019843: rRNA binding1.28E-03
55GO:0008266: poly(U) RNA binding1.30E-03
56GO:0003993: acid phosphatase activity1.67E-03
57GO:0043023: ribosomal large subunit binding1.79E-03
58GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.79E-03
59GO:0004792: thiosulfate sulfurtransferase activity1.79E-03
60GO:0005528: FK506 binding1.80E-03
61GO:0001053: plastid sigma factor activity2.40E-03
62GO:0005319: lipid transporter activity2.40E-03
63GO:0004045: aminoacyl-tRNA hydrolase activity2.40E-03
64GO:0016987: sigma factor activity2.40E-03
65GO:0070628: proteasome binding2.40E-03
66GO:0045430: chalcone isomerase activity2.40E-03
67GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.40E-03
68GO:0008374: O-acyltransferase activity3.07E-03
69GO:0016773: phosphotransferase activity, alcohol group as acceptor3.07E-03
70GO:0005275: amine transmembrane transporter activity3.07E-03
71GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.79E-03
72GO:2001070: starch binding3.79E-03
73GO:0031593: polyubiquitin binding3.79E-03
74GO:0004556: alpha-amylase activity3.79E-03
75GO:0051920: peroxiredoxin activity4.57E-03
76GO:0005261: cation channel activity4.57E-03
77GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.57E-03
78GO:0016209: antioxidant activity6.27E-03
79GO:0008312: 7S RNA binding6.27E-03
80GO:0004033: aldo-keto reductase (NADP) activity6.27E-03
81GO:0008173: RNA methyltransferase activity7.19E-03
82GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.19E-03
83GO:0008236: serine-type peptidase activity7.91E-03
84GO:0008138: protein tyrosine/serine/threonine phosphatase activity8.16E-03
85GO:0016844: strictosidine synthase activity9.17E-03
86GO:0003746: translation elongation factor activity1.06E-02
87GO:0005089: Rho guanyl-nucleotide exchange factor activity1.13E-02
88GO:0031072: heat shock protein binding1.37E-02
89GO:0004565: beta-galactosidase activity1.37E-02
90GO:0016787: hydrolase activity1.40E-02
91GO:0051537: 2 iron, 2 sulfur cluster binding1.48E-02
92GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.49E-02
93GO:0008083: growth factor activity1.49E-02
94GO:0004601: peroxidase activity1.75E-02
95GO:0051536: iron-sulfur cluster binding1.88E-02
96GO:0004857: enzyme inhibitor activity1.88E-02
97GO:0043130: ubiquitin binding1.88E-02
98GO:0051087: chaperone binding2.01E-02
99GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.29E-02
100GO:0030570: pectate lyase activity2.44E-02
101GO:0003727: single-stranded RNA binding2.59E-02
102GO:0003756: protein disulfide isomerase activity2.59E-02
103GO:0008080: N-acetyltransferase activity3.06E-02
104GO:0003735: structural constituent of ribosome3.08E-02
105GO:0004872: receptor activity3.39E-02
106GO:0016491: oxidoreductase activity3.85E-02
107GO:0003684: damaged DNA binding4.07E-02
108GO:0016791: phosphatase activity4.07E-02
109GO:0009055: electron carrier activity4.07E-02
110GO:0005200: structural constituent of cytoskeleton4.25E-02
111GO:0003723: RNA binding4.62E-02
112GO:0003729: mRNA binding4.69E-02
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Gene type



Gene DE type