co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G67900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019685: photosynthesis, dark reaction	0.00E+00
2	GO:2000505: regulation of energy homeostasis	0.00E+00
3	GO:0002184: cytoplasmic translational termination	0.00E+00
4	GO:0017038: protein import	0.00E+00
5	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
6	GO:0016553: base conversion or substitution editing	0.00E+00
7	GO:0090470: shoot organ boundary specification	0.00E+00
8	GO:0090279: regulation of calcium ion import	0.00E+00
9	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
10	GO:0042821: pyridoxal biosynthetic process	0.00E+00
11	GO:0042820: vitamin B6 catabolic process	0.00E+00
12	GO:0071474: cellular hyperosmotic response	0.00E+00
13	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
14	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
15	GO:0015995: chlorophyll biosynthetic process	4.85E-11
16	GO:0006021: inositol biosynthetic process	1.39E-06
17	GO:0006783: heme biosynthetic process	4.57E-05
18	GO:0055114: oxidation-reduction process	5.52E-05
19	GO:2001141: regulation of RNA biosynthetic process	7.10E-05
20	GO:0006782: protoporphyrinogen IX biosynthetic process	7.74E-05
21	GO:0010207: photosystem II assembly	1.74E-04
22	GO:0010143: cutin biosynthetic process	1.74E-04
23	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.70E-04
24	GO:0046855: inositol phosphate dephosphorylation	2.70E-04
25	GO:0009395: phospholipid catabolic process	4.66E-04
26	GO:0009443: pyridoxal 5'-phosphate salvage	4.67E-04
27	GO:0010362: negative regulation of anion channel activity by blue light	4.67E-04
28	GO:0015969: guanosine tetraphosphate metabolic process	4.67E-04
29	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	4.67E-04
30	GO:0031426: polycistronic mRNA processing	4.67E-04
31	GO:0043489: RNA stabilization	4.67E-04
32	GO:0015671: oxygen transport	4.67E-04
33	GO:0000481: maturation of 5S rRNA	4.67E-04
34	GO:0006659: phosphatidylserine biosynthetic process	4.67E-04
35	GO:0015801: aromatic amino acid transport	4.67E-04
36	GO:0042547: cell wall modification involved in multidimensional cell growth	4.67E-04
37	GO:0043686: co-translational protein modification	4.67E-04
38	GO:1902458: positive regulation of stomatal opening	4.67E-04
39	GO:0034337: RNA folding	4.67E-04
40	GO:0006631: fatty acid metabolic process	5.68E-04
41	GO:0016559: peroxisome fission	5.81E-04
42	GO:0071482: cellular response to light stimulus	7.08E-04
43	GO:0032544: plastid translation	7.08E-04
44	GO:0006633: fatty acid biosynthetic process	7.58E-04
45	GO:0010206: photosystem II repair	8.48E-04
46	GO:0006779: porphyrin-containing compound biosynthetic process	9.98E-04
47	GO:0005982: starch metabolic process	9.98E-04
48	GO:0051262: protein tetramerization	1.01E-03
49	GO:0010115: regulation of abscisic acid biosynthetic process	1.01E-03
50	GO:0030187: melatonin biosynthetic process	1.01E-03
51	GO:0006432: phenylalanyl-tRNA aminoacylation	1.01E-03
52	GO:0018026: peptidyl-lysine monomethylation	1.01E-03
53	GO:0090342: regulation of cell aging	1.01E-03
54	GO:0006435: threonyl-tRNA aminoacylation	1.01E-03
55	GO:0010155: regulation of proton transport	1.01E-03
56	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.01E-03
57	GO:0009089: lysine biosynthetic process via diaminopimelate	1.34E-03
58	GO:0009773: photosynthetic electron transport in photosystem I	1.34E-03
59	GO:0006352: DNA-templated transcription, initiation	1.34E-03
60	GO:0006790: sulfur compound metabolic process	1.53E-03
61	GO:0016024: CDP-diacylglycerol biosynthetic process	1.53E-03
62	GO:0034051: negative regulation of plant-type hypersensitive response	1.64E-03
63	GO:0009405: pathogenesis	1.64E-03
64	GO:0044375: regulation of peroxisome size	1.64E-03
65	GO:0046854: phosphatidylinositol phosphorylation	2.21E-03
66	GO:0009102: biotin biosynthetic process	2.38E-03
67	GO:0009152: purine ribonucleotide biosynthetic process	2.38E-03
68	GO:0046653: tetrahydrofolate metabolic process	2.38E-03
69	GO:0010239: chloroplast mRNA processing	2.38E-03
70	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.38E-03
71	GO:0033014: tetrapyrrole biosynthetic process	2.38E-03
72	GO:0006424: glutamyl-tRNA aminoacylation	2.38E-03
73	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.38E-03
74	GO:0046739: transport of virus in multicellular host	2.38E-03
75	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.38E-03
76	GO:0010371: regulation of gibberellin biosynthetic process	2.38E-03
77	GO:0006020: inositol metabolic process	2.38E-03
78	GO:0019464: glycine decarboxylation via glycine cleavage system	3.20E-03
79	GO:0009765: photosynthesis, light harvesting	3.20E-03
80	GO:0006546: glycine catabolic process	3.20E-03
81	GO:0010021: amylopectin biosynthetic process	3.20E-03
82	GO:0010109: regulation of photosynthesis	3.20E-03
83	GO:0048511: rhythmic process	3.31E-03
84	GO:0000304: response to singlet oxygen	4.10E-03
85	GO:0080110: sporopollenin biosynthetic process	4.10E-03
86	GO:0032543: mitochondrial translation	4.10E-03
87	GO:0006564: L-serine biosynthetic process	4.10E-03
88	GO:0016120: carotene biosynthetic process	4.10E-03
89	GO:0009904: chloroplast accumulation movement	4.10E-03
90	GO:0045038: protein import into chloroplast thylakoid membrane	4.10E-03
91	GO:0031365: N-terminal protein amino acid modification	4.10E-03
92	GO:0016123: xanthophyll biosynthetic process	4.10E-03
93	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	5.08E-03
94	GO:0000470: maturation of LSU-rRNA	5.08E-03
95	GO:0006655: phosphatidylglycerol biosynthetic process	5.08E-03
96	GO:0048831: regulation of shoot system development	5.08E-03
97	GO:0042549: photosystem II stabilization	5.08E-03
98	GO:0006412: translation	5.15E-03
99	GO:0009955: adaxial/abaxial pattern specification	6.13E-03
100	GO:0009903: chloroplast avoidance movement	6.13E-03
101	GO:0030488: tRNA methylation	6.13E-03
102	GO:1901259: chloroplast rRNA processing	6.13E-03
103	GO:0010310: regulation of hydrogen peroxide metabolic process	6.13E-03
104	GO:0009791: post-embryonic development	6.28E-03
105	GO:0016032: viral process	7.19E-03
106	GO:0006400: tRNA modification	7.25E-03
107	GO:0009658: chloroplast organization	7.79E-03
108	GO:0005978: glycogen biosynthetic process	8.44E-03
109	GO:0006605: protein targeting	8.44E-03
110	GO:0032508: DNA duplex unwinding	8.44E-03
111	GO:2000070: regulation of response to water deprivation	8.44E-03
112	GO:0022900: electron transport chain	9.69E-03
113	GO:0015996: chlorophyll catabolic process	9.69E-03
114	GO:0007186: G-protein coupled receptor signaling pathway	9.69E-03
115	GO:0010027: thylakoid membrane organization	9.76E-03
116	GO:0009821: alkaloid biosynthetic process	1.10E-02
117	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.10E-02
118	GO:0006098: pentose-phosphate shunt	1.10E-02
119	GO:0019432: triglyceride biosynthetic process	1.10E-02
120	GO:0048507: meristem development	1.10E-02
121	GO:0009638: phototropism	1.24E-02
122	GO:0009817: defense response to fungus, incompatible interaction	1.28E-02
123	GO:0009735: response to cytokinin	1.30E-02
124	GO:0015979: photosynthesis	1.32E-02
125	GO:0010629: negative regulation of gene expression	1.38E-02
126	GO:0006535: cysteine biosynthetic process from serine	1.38E-02
127	GO:0006811: ion transport	1.41E-02
128	GO:0019684: photosynthesis, light reaction	1.53E-02
129	GO:0008285: negative regulation of cell proliferation	1.53E-02
130	GO:0000272: polysaccharide catabolic process	1.53E-02
131	GO:0009684: indoleacetic acid biosynthetic process	1.53E-02
132	GO:0045087: innate immune response	1.62E-02
133	GO:0045037: protein import into chloroplast stroma	1.69E-02
134	GO:0009451: RNA modification	1.78E-02
135	GO:0009785: blue light signaling pathway	1.85E-02
136	GO:0009718: anthocyanin-containing compound biosynthetic process	1.85E-02
137	GO:0009725: response to hormone	1.85E-02
138	GO:0006094: gluconeogenesis	1.85E-02
139	GO:0009767: photosynthetic electron transport chain	1.85E-02
140	GO:0016042: lipid catabolic process	1.86E-02
141	GO:0010020: chloroplast fission	2.01E-02
142	GO:0009266: response to temperature stimulus	2.01E-02
143	GO:0007031: peroxisome organization	2.19E-02
144	GO:0019853: L-ascorbic acid biosynthetic process	2.19E-02
145	GO:0010025: wax biosynthetic process	2.36E-02
146	GO:0006636: unsaturated fatty acid biosynthetic process	2.36E-02
147	GO:0019344: cysteine biosynthetic process	2.54E-02
148	GO:0006289: nucleotide-excision repair	2.54E-02
149	GO:0008299: isoprenoid biosynthetic process	2.73E-02
150	GO:0006418: tRNA aminoacylation for protein translation	2.73E-02
151	GO:0007017: microtubule-based process	2.73E-02
152	GO:0010073: meristem maintenance	2.73E-02
153	GO:0061077: chaperone-mediated protein folding	2.92E-02
154	GO:0031408: oxylipin biosynthetic process	2.92E-02
155	GO:0003333: amino acid transmembrane transport	2.92E-02
156	GO:0010431: seed maturation	2.92E-02
157	GO:0015031: protein transport	2.97E-02
158	GO:0042254: ribosome biogenesis	3.06E-02
159	GO:0009814: defense response, incompatible interaction	3.11E-02
160	GO:0016226: iron-sulfur cluster assembly	3.11E-02
161	GO:0035428: hexose transmembrane transport	3.11E-02
162	GO:0080092: regulation of pollen tube growth	3.11E-02
163	GO:0010227: floral organ abscission	3.31E-02
164	GO:0006096: glycolytic process	3.35E-02
165	GO:0010584: pollen exine formation	3.51E-02
166	GO:0019722: calcium-mediated signaling	3.51E-02
167	GO:0016117: carotenoid biosynthetic process	3.72E-02
168	GO:0080167: response to karrikin	3.90E-02
169	GO:0042335: cuticle development	3.93E-02
170	GO:0000413: protein peptidyl-prolyl isomerization	3.93E-02
171	GO:0005975: carbohydrate metabolic process	4.10E-02
172	GO:0006396: RNA processing	4.14E-02
173	GO:0006520: cellular amino acid metabolic process	4.15E-02
174	GO:0010182: sugar mediated signaling pathway	4.15E-02
175	GO:0046323: glucose import	4.15E-02
176	GO:0009741: response to brassinosteroid	4.15E-02
177	GO:0046686: response to cadmium ion	4.30E-02
178	GO:0009646: response to absence of light	4.37E-02
179	GO:0007018: microtubule-based movement	4.37E-02
180	GO:0042752: regulation of circadian rhythm	4.37E-02
181	GO:0019252: starch biosynthetic process	4.59E-02
182	GO:0008654: phospholipid biosynthetic process	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0004076: biotin synthase activity	0.00E+00
2	GO:0004059: aralkylamine N-acetyltransferase activity	0.00E+00
3	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
4	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
5	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
6	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
7	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
8	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
9	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
10	GO:0050613: delta14-sterol reductase activity	0.00E+00
11	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
12	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
13	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
14	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
15	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
16	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
17	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
18	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
19	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
20	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
21	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
22	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
23	GO:0070402: NADPH binding	1.01E-07
24	GO:0016851: magnesium chelatase activity	4.85E-07
25	GO:0016491: oxidoreductase activity	2.00E-06
26	GO:0052832: inositol monophosphate 3-phosphatase activity	9.64E-06
27	GO:0008934: inositol monophosphate 1-phosphatase activity	9.64E-06
28	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	9.64E-06
29	GO:0052833: inositol monophosphate 4-phosphatase activity	9.64E-06
30	GO:0016788: hydrolase activity, acting on ester bonds	1.33E-05
31	GO:0030267: glyoxylate reductase (NADP) activity	3.30E-05
32	GO:0019843: rRNA binding	8.24E-05
33	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.23E-04
34	GO:0016987: sigma factor activity	1.24E-04
35	GO:0001053: plastid sigma factor activity	1.24E-04
36	GO:0008266: poly(U) RNA binding	1.74E-04
37	GO:0000293: ferric-chelate reductase activity	2.70E-04
38	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.70E-04
39	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.62E-04
40	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.62E-04
41	GO:0003993: acid phosphatase activity	4.65E-04
42	GO:0005227: calcium activated cation channel activity	4.67E-04
43	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	4.67E-04
44	GO:0004856: xylulokinase activity	4.67E-04
45	GO:0009496: plastoquinol--plastocyanin reductase activity	4.67E-04
46	GO:0080042: ADP-glucose pyrophosphohydrolase activity	4.67E-04
47	GO:0004325: ferrochelatase activity	4.67E-04
48	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.67E-04
49	GO:0042586: peptide deformylase activity	4.67E-04
50	GO:0031957: very long-chain fatty acid-CoA ligase activity	4.67E-04
51	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.67E-04
52	GO:0005344: oxygen transporter activity	4.67E-04
53	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	4.67E-04
54	GO:0015173: aromatic amino acid transmembrane transporter activity	1.01E-03
55	GO:0003844: 1,4-alpha-glucan branching enzyme activity	1.01E-03
56	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	1.01E-03
57	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	1.01E-03
58	GO:0004829: threonine-tRNA ligase activity	1.01E-03
59	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.01E-03
60	GO:0004826: phenylalanine-tRNA ligase activity	1.01E-03
61	GO:0008728: GTP diphosphokinase activity	1.01E-03
62	GO:0004512: inositol-3-phosphate synthase activity	1.01E-03
63	GO:0050017: L-3-cyanoalanine synthase activity	1.01E-03
64	GO:0042389: omega-3 fatty acid desaturase activity	1.01E-03
65	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.01E-03
66	GO:0004617: phosphoglycerate dehydrogenase activity	1.01E-03
67	GO:0000049: tRNA binding	1.53E-03
68	GO:0015462: ATPase-coupled protein transmembrane transporter activity	1.64E-03
69	GO:0005504: fatty acid binding	1.64E-03
70	GO:0043169: cation binding	1.64E-03
71	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.64E-03
72	GO:0002161: aminoacyl-tRNA editing activity	1.64E-03
73	GO:0004148: dihydrolipoyl dehydrogenase activity	1.64E-03
74	GO:0004751: ribose-5-phosphate isomerase activity	1.64E-03
75	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.64E-03
76	GO:0008864: formyltetrahydrofolate deformylase activity	1.64E-03
77	GO:0008236: serine-type peptidase activity	1.87E-03
78	GO:0004375: glycine dehydrogenase (decarboxylating) activity	2.38E-03
79	GO:0048027: mRNA 5'-UTR binding	2.38E-03
80	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.38E-03
81	GO:0009882: blue light photoreceptor activity	2.38E-03
82	GO:0043023: ribosomal large subunit binding	2.38E-03
83	GO:0005528: FK506 binding	2.73E-03
84	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.20E-03
85	GO:0004045: aminoacyl-tRNA hydrolase activity	3.20E-03
86	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	3.20E-03
87	GO:0070628: proteasome binding	3.20E-03
88	GO:0045430: chalcone isomerase activity	3.20E-03
89	GO:0016279: protein-lysine N-methyltransferase activity	3.20E-03
90	GO:0030570: pectate lyase activity	3.96E-03
91	GO:0005275: amine transmembrane transporter activity	4.10E-03
92	GO:0016773: phosphotransferase activity, alcohol group as acceptor	4.10E-03
93	GO:0004040: amidase activity	4.10E-03
94	GO:0003735: structural constituent of ribosome	4.78E-03
95	GO:0004332: fructose-bisphosphate aldolase activity	5.08E-03
96	GO:0031593: polyubiquitin binding	5.08E-03
97	GO:0102229: amylopectin maltohydrolase activity	5.08E-03
98	GO:0042578: phosphoric ester hydrolase activity	5.08E-03
99	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	5.08E-03
100	GO:2001070: starch binding	5.08E-03
101	GO:0008080: N-acetyltransferase activity	5.44E-03
102	GO:0016787: hydrolase activity	5.76E-03
103	GO:0042802: identical protein binding	5.77E-03
104	GO:0004124: cysteine synthase activity	6.13E-03
105	GO:0051920: peroxiredoxin activity	6.13E-03
106	GO:0004017: adenylate kinase activity	6.13E-03
107	GO:0016832: aldehyde-lyase activity	6.13E-03
108	GO:0102391: decanoate--CoA ligase activity	6.13E-03
109	GO:0016161: beta-amylase activity	6.13E-03
110	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	6.13E-03
111	GO:0005261: cation channel activity	6.13E-03
112	GO:0009927: histidine phosphotransfer kinase activity	6.13E-03
113	GO:0048038: quinone binding	6.73E-03
114	GO:0004467: long-chain fatty acid-CoA ligase activity	7.25E-03
115	GO:0043022: ribosome binding	8.44E-03
116	GO:0004033: aldo-keto reductase (NADP) activity	8.44E-03
117	GO:0016209: antioxidant activity	8.44E-03
118	GO:0008173: RNA methyltransferase activity	9.69E-03
119	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	9.69E-03
120	GO:0004743: pyruvate kinase activity	1.24E-02
121	GO:0030955: potassium ion binding	1.24E-02
122	GO:0016844: strictosidine synthase activity	1.24E-02
123	GO:0052689: carboxylic ester hydrolase activity	1.26E-02
124	GO:0005525: GTP binding	1.27E-02
125	GO:0004252: serine-type endopeptidase activity	1.31E-02
126	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.48E-02
127	GO:0047372: acylglycerol lipase activity	1.53E-02
128	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.53E-02
129	GO:0004565: beta-galactosidase activity	1.85E-02
130	GO:0031072: heat shock protein binding	1.85E-02
131	GO:0000155: phosphorelay sensor kinase activity	1.85E-02
132	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.01E-02
133	GO:0016740: transferase activity	2.13E-02
134	GO:0051537: 2 iron, 2 sulfur cluster binding	2.27E-02
135	GO:0046872: metal ion binding	2.31E-02
136	GO:0004857: enzyme inhibitor activity	2.54E-02
137	GO:0043130: ubiquitin binding	2.54E-02
138	GO:0051536: iron-sulfur cluster binding	2.54E-02
139	GO:0051287: NAD binding	2.54E-02
140	GO:0051087: chaperone binding	2.73E-02
141	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.83E-02
142	GO:0003723: RNA binding	3.37E-02
143	GO:0003756: protein disulfide isomerase activity	3.51E-02
144	GO:0016887: ATPase activity	3.70E-02
145	GO:0004812: aminoacyl-tRNA ligase activity	3.72E-02
146	GO:0003729: mRNA binding	3.96E-02
147	GO:0016853: isomerase activity	4.37E-02
148	GO:0005355: glucose transmembrane transporter activity	4.37E-02
149	GO:0050662: coenzyme binding	4.37E-02
150	GO:0010181: FMN binding	4.37E-02
151	GO:0004872: receptor activity	4.59E-02