Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G65980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006489: dolichyl diphosphate biosynthetic process0.00E+00
2GO:0090630: activation of GTPase activity5.08E-07
3GO:0031338: regulation of vesicle fusion4.60E-05
4GO:0019725: cellular homeostasis1.13E-04
5GO:0043132: NAD transport1.13E-04
6GO:0006501: C-terminal protein lipidation1.13E-04
7GO:0044375: regulation of peroxisome size1.95E-04
8GO:0010186: positive regulation of cellular defense response1.95E-04
9GO:0048577: negative regulation of short-day photoperiodism, flowering2.85E-04
10GO:0015858: nucleoside transport2.85E-04
11GO:0006914: autophagy3.49E-04
12GO:0009567: double fertilization forming a zygote and endosperm3.49E-04
13GO:0044804: nucleophagy3.84E-04
14GO:0060548: negative regulation of cell death3.84E-04
15GO:0006661: phosphatidylinositol biosynthetic process3.84E-04
16GO:0010600: regulation of auxin biosynthetic process3.84E-04
17GO:0000422: mitophagy4.88E-04
18GO:0000045: autophagosome assembly5.98E-04
19GO:0003006: developmental process involved in reproduction5.98E-04
20GO:0006121: mitochondrial electron transport, succinate to ubiquinone5.98E-04
21GO:0030091: protein repair9.57E-04
22GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.03E-03
23GO:0022900: electron transport chain1.09E-03
24GO:0007338: single fertilization1.22E-03
25GO:0008202: steroid metabolic process1.36E-03
26GO:0090332: stomatal closure1.36E-03
27GO:0006541: glutamine metabolic process2.14E-03
28GO:0010039: response to iron ion2.31E-03
29GO:0007031: peroxisome organization2.31E-03
30GO:0000162: tryptophan biosynthetic process2.49E-03
31GO:0034976: response to endoplasmic reticulum stress2.49E-03
32GO:0006487: protein N-linked glycosylation2.67E-03
33GO:0006874: cellular calcium ion homeostasis2.85E-03
34GO:0015992: proton transport3.04E-03
35GO:0010227: floral organ abscission3.43E-03
36GO:0048868: pollen tube development4.25E-03
37GO:0008654: phospholipid biosynthetic process4.68E-03
38GO:0055072: iron ion homeostasis4.68E-03
39GO:0009851: auxin biosynthetic process4.68E-03
40GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.57E-03
41GO:0015031: protein transport7.21E-03
42GO:0010311: lateral root formation7.87E-03
43GO:0006811: ion transport8.14E-03
44GO:0009910: negative regulation of flower development8.41E-03
45GO:0009631: cold acclimation8.41E-03
46GO:0034599: cellular response to oxidative stress9.25E-03
47GO:0006839: mitochondrial transport9.82E-03
48GO:0000209: protein polyubiquitination1.10E-02
49GO:0000165: MAPK cascade1.23E-02
50GO:0009664: plant-type cell wall organization1.26E-02
51GO:0006857: oligopeptide transport1.39E-02
52GO:0048316: seed development1.52E-02
53GO:0009553: embryo sac development1.66E-02
54GO:0009624: response to nematode1.70E-02
55GO:0006511: ubiquitin-dependent protein catabolic process1.86E-02
56GO:0009058: biosynthetic process2.07E-02
57GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.71E-02
58GO:0009617: response to bacterium2.84E-02
59GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.23E-02
60GO:0009723: response to ethylene3.79E-02
61GO:0010200: response to chitin4.08E-02
62GO:0044550: secondary metabolite biosynthetic process4.23E-02
63GO:0045454: cell redox homeostasis4.52E-02
64GO:0006886: intracellular protein transport4.63E-02
65GO:0006869: lipid transport4.83E-02
RankGO TermAdjusted P value
1GO:0052873: FMN reductase (NADPH) activity0.00E+00
2GO:0070191: methionine-R-sulfoxide reductase activity0.00E+00
3GO:0044610: FMN transmembrane transporter activity0.00E+00
4GO:0008752: FMN reductase activity0.00E+00
5GO:0019776: Atg8 ligase activity2.38E-06
6GO:0015230: FAD transmembrane transporter activity4.60E-05
7GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity4.60E-05
8GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity4.60E-05
9GO:0019786: Atg8-specific protease activity4.60E-05
10GO:1990585: hydroxyproline O-arabinosyltransferase activity1.13E-04
11GO:0051980: iron-nicotianamine transmembrane transporter activity1.13E-04
12GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity1.13E-04
13GO:0015228: coenzyme A transmembrane transporter activity1.13E-04
14GO:0051724: NAD transporter activity1.13E-04
15GO:0032934: sterol binding1.13E-04
16GO:0019779: Atg8 activating enzyme activity1.13E-04
17GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.95E-04
18GO:0004049: anthranilate synthase activity1.95E-04
19GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances3.84E-04
20GO:0080122: AMP transmembrane transporter activity4.88E-04
21GO:0017137: Rab GTPase binding4.88E-04
22GO:0000104: succinate dehydrogenase activity4.88E-04
23GO:0005096: GTPase activator activity5.65E-04
24GO:0004602: glutathione peroxidase activity7.13E-04
25GO:0005347: ATP transmembrane transporter activity7.13E-04
26GO:0008113: peptide-methionine (S)-S-oxide reductase activity7.13E-04
27GO:0015217: ADP transmembrane transporter activity7.13E-04
28GO:0033743: peptide-methionine (R)-S-oxide reductase activity7.13E-04
29GO:0008121: ubiquinol-cytochrome-c reductase activity8.33E-04
30GO:0005544: calcium-dependent phospholipid binding9.57E-04
31GO:0008142: oxysterol binding1.09E-03
32GO:0015198: oligopeptide transporter activity1.81E-03
33GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.27E-03
34GO:0004970: ionotropic glutamate receptor activity2.31E-03
35GO:0005217: intracellular ligand-gated ion channel activity2.31E-03
36GO:0003756: protein disulfide isomerase activity3.63E-03
37GO:0005199: structural constituent of cell wall4.25E-03
38GO:0001085: RNA polymerase II transcription factor binding4.25E-03
39GO:0016853: isomerase activity4.47E-03
40GO:0010181: FMN binding4.47E-03
41GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding8.41E-03
42GO:0016874: ligase activity1.63E-02
43GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.03E-02
44GO:0015297: antiporter activity2.42E-02
45GO:0008017: microtubule binding2.59E-02
46GO:0042802: identical protein binding2.97E-02
47GO:0004601: peroxidase activity3.42E-02
48GO:0003682: chromatin binding3.55E-02
49GO:0004842: ubiquitin-protein transferase activity3.83E-02
50GO:0004497: monooxygenase activity3.98E-02
51GO:0061630: ubiquitin protein ligase activity4.13E-02
52GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.78E-02
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Gene type



Gene DE type