GO Enrichment Analysis of Co-expressed Genes with
AT1G65070
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:1905177: tracheary element differentiation | 0.00E+00 |
2 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
3 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
4 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
5 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
7 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
8 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
9 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
10 | GO:0007638: mechanosensory behavior | 0.00E+00 |
11 | GO:0009606: tropism | 0.00E+00 |
12 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
13 | GO:0009658: chloroplast organization | 2.51E-07 |
14 | GO:0042793: transcription from plastid promoter | 3.00E-06 |
15 | GO:1901259: chloroplast rRNA processing | 5.19E-06 |
16 | GO:0009451: RNA modification | 8.01E-06 |
17 | GO:0009657: plastid organization | 1.78E-05 |
18 | GO:0010239: chloroplast mRNA processing | 4.51E-05 |
19 | GO:0006418: tRNA aminoacylation for protein translation | 1.86E-04 |
20 | GO:0048437: floral organ development | 3.16E-04 |
21 | GO:0009793: embryo development ending in seed dormancy | 3.24E-04 |
22 | GO:0010063: positive regulation of trichoblast fate specification | 3.60E-04 |
23 | GO:0010480: microsporocyte differentiation | 3.60E-04 |
24 | GO:0042371: vitamin K biosynthetic process | 3.60E-04 |
25 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.60E-04 |
26 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 3.60E-04 |
27 | GO:0006419: alanyl-tRNA aminoacylation | 3.60E-04 |
28 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 3.60E-04 |
29 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 3.60E-04 |
30 | GO:0070509: calcium ion import | 3.60E-04 |
31 | GO:0006353: DNA-templated transcription, termination | 3.97E-04 |
32 | GO:0007389: pattern specification process | 4.86E-04 |
33 | GO:0000373: Group II intron splicing | 5.82E-04 |
34 | GO:0000902: cell morphogenesis | 5.82E-04 |
35 | GO:0032502: developmental process | 5.98E-04 |
36 | GO:0009416: response to light stimulus | 6.19E-04 |
37 | GO:0018026: peptidyl-lysine monomethylation | 7.83E-04 |
38 | GO:0009662: etioplast organization | 7.83E-04 |
39 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 7.83E-04 |
40 | GO:1904143: positive regulation of carotenoid biosynthetic process | 7.83E-04 |
41 | GO:2000123: positive regulation of stomatal complex development | 7.83E-04 |
42 | GO:0060359: response to ammonium ion | 7.83E-04 |
43 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 7.83E-04 |
44 | GO:1900871: chloroplast mRNA modification | 7.83E-04 |
45 | GO:0010027: thylakoid membrane organization | 8.76E-04 |
46 | GO:0045037: protein import into chloroplast stroma | 1.05E-03 |
47 | GO:0010623: programmed cell death involved in cell development | 1.27E-03 |
48 | GO:0042780: tRNA 3'-end processing | 1.27E-03 |
49 | GO:0043157: response to cation stress | 1.27E-03 |
50 | GO:0005977: glycogen metabolic process | 1.27E-03 |
51 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 1.27E-03 |
52 | GO:0048281: inflorescence morphogenesis | 1.27E-03 |
53 | GO:0006954: inflammatory response | 1.27E-03 |
54 | GO:0010207: photosystem II assembly | 1.34E-03 |
55 | GO:0009734: auxin-activated signaling pathway | 1.39E-03 |
56 | GO:0070588: calcium ion transmembrane transport | 1.50E-03 |
57 | GO:0009790: embryo development | 1.70E-03 |
58 | GO:0051289: protein homotetramerization | 1.83E-03 |
59 | GO:0016556: mRNA modification | 1.83E-03 |
60 | GO:1902476: chloride transmembrane transport | 1.83E-03 |
61 | GO:0010071: root meristem specification | 1.83E-03 |
62 | GO:0051513: regulation of monopolar cell growth | 1.83E-03 |
63 | GO:0007231: osmosensory signaling pathway | 1.83E-03 |
64 | GO:0044211: CTP salvage | 1.83E-03 |
65 | GO:0019048: modulation by virus of host morphology or physiology | 1.83E-03 |
66 | GO:0046739: transport of virus in multicellular host | 1.83E-03 |
67 | GO:0031048: chromatin silencing by small RNA | 1.83E-03 |
68 | GO:0010148: transpiration | 1.83E-03 |
69 | GO:2000904: regulation of starch metabolic process | 1.83E-03 |
70 | GO:0009926: auxin polar transport | 2.27E-03 |
71 | GO:0044206: UMP salvage | 2.45E-03 |
72 | GO:0044205: 'de novo' UMP biosynthetic process | 2.45E-03 |
73 | GO:0010021: amylopectin biosynthetic process | 2.45E-03 |
74 | GO:0006808: regulation of nitrogen utilization | 2.45E-03 |
75 | GO:0042274: ribosomal small subunit biogenesis | 2.45E-03 |
76 | GO:0033500: carbohydrate homeostasis | 2.45E-03 |
77 | GO:2000038: regulation of stomatal complex development | 2.45E-03 |
78 | GO:0051567: histone H3-K9 methylation | 2.45E-03 |
79 | GO:0010508: positive regulation of autophagy | 2.45E-03 |
80 | GO:0010082: regulation of root meristem growth | 2.69E-03 |
81 | GO:0032543: mitochondrial translation | 3.14E-03 |
82 | GO:0010236: plastoquinone biosynthetic process | 3.14E-03 |
83 | GO:0048497: maintenance of floral organ identity | 3.14E-03 |
84 | GO:0010158: abaxial cell fate specification | 3.14E-03 |
85 | GO:0010375: stomatal complex patterning | 3.14E-03 |
86 | GO:0008033: tRNA processing | 3.42E-03 |
87 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.47E-03 |
88 | GO:0009228: thiamine biosynthetic process | 3.88E-03 |
89 | GO:0016458: gene silencing | 3.88E-03 |
90 | GO:0050665: hydrogen peroxide biosynthetic process | 3.88E-03 |
91 | GO:0010405: arabinogalactan protein metabolic process | 3.88E-03 |
92 | GO:0009959: negative gravitropism | 3.88E-03 |
93 | GO:0009913: epidermal cell differentiation | 3.88E-03 |
94 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.88E-03 |
95 | GO:0010315: auxin efflux | 3.88E-03 |
96 | GO:0006206: pyrimidine nucleobase metabolic process | 3.88E-03 |
97 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.88E-03 |
98 | GO:0009942: longitudinal axis specification | 4.67E-03 |
99 | GO:0009099: valine biosynthetic process | 4.67E-03 |
100 | GO:0030488: tRNA methylation | 4.67E-03 |
101 | GO:0009854: oxidative photosynthetic carbon pathway | 4.67E-03 |
102 | GO:0042372: phylloquinone biosynthetic process | 4.67E-03 |
103 | GO:0009082: branched-chain amino acid biosynthetic process | 4.67E-03 |
104 | GO:0017148: negative regulation of translation | 4.67E-03 |
105 | GO:0009630: gravitropism | 4.86E-03 |
106 | GO:0006508: proteolysis | 5.26E-03 |
107 | GO:0010444: guard mother cell differentiation | 5.52E-03 |
108 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 5.52E-03 |
109 | GO:0006400: tRNA modification | 5.52E-03 |
110 | GO:0010103: stomatal complex morphogenesis | 5.52E-03 |
111 | GO:0048528: post-embryonic root development | 5.52E-03 |
112 | GO:0009772: photosynthetic electron transport in photosystem II | 5.52E-03 |
113 | GO:0010050: vegetative phase change | 5.52E-03 |
114 | GO:0006821: chloride transport | 5.52E-03 |
115 | GO:0070370: cellular heat acclimation | 5.52E-03 |
116 | GO:0010252: auxin homeostasis | 5.52E-03 |
117 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 6.26E-03 |
118 | GO:0048766: root hair initiation | 6.41E-03 |
119 | GO:0070413: trehalose metabolism in response to stress | 6.41E-03 |
120 | GO:0048564: photosystem I assembly | 6.41E-03 |
121 | GO:0001522: pseudouridine synthesis | 6.41E-03 |
122 | GO:0009850: auxin metabolic process | 6.41E-03 |
123 | GO:0042255: ribosome assembly | 6.41E-03 |
124 | GO:0046620: regulation of organ growth | 6.41E-03 |
125 | GO:0005975: carbohydrate metabolic process | 7.19E-03 |
126 | GO:0009097: isoleucine biosynthetic process | 7.36E-03 |
127 | GO:0010204: defense response signaling pathway, resistance gene-independent | 7.36E-03 |
128 | GO:0009827: plant-type cell wall modification | 7.36E-03 |
129 | GO:0001558: regulation of cell growth | 7.36E-03 |
130 | GO:0010497: plasmodesmata-mediated intercellular transport | 7.36E-03 |
131 | GO:0006098: pentose-phosphate shunt | 8.35E-03 |
132 | GO:0048481: plant ovule development | 8.60E-03 |
133 | GO:0009638: phototropism | 9.38E-03 |
134 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 9.38E-03 |
135 | GO:0040008: regulation of growth | 9.88E-03 |
136 | GO:0030422: production of siRNA involved in RNA interference | 1.05E-02 |
137 | GO:0045036: protein targeting to chloroplast | 1.05E-02 |
138 | GO:0009641: shade avoidance | 1.05E-02 |
139 | GO:0006259: DNA metabolic process | 1.05E-02 |
140 | GO:0006535: cysteine biosynthetic process from serine | 1.05E-02 |
141 | GO:0048364: root development | 1.15E-02 |
142 | GO:0048229: gametophyte development | 1.16E-02 |
143 | GO:0006816: calcium ion transport | 1.16E-02 |
144 | GO:0006265: DNA topological change | 1.16E-02 |
145 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.16E-02 |
146 | GO:0009073: aromatic amino acid family biosynthetic process | 1.16E-02 |
147 | GO:0010582: floral meristem determinacy | 1.28E-02 |
148 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.28E-02 |
149 | GO:0009691: cytokinin biosynthetic process | 1.40E-02 |
150 | GO:0050826: response to freezing | 1.40E-02 |
151 | GO:0010075: regulation of meristem growth | 1.40E-02 |
152 | GO:0006094: gluconeogenesis | 1.40E-02 |
153 | GO:0009767: photosynthetic electron transport chain | 1.40E-02 |
154 | GO:0009785: blue light signaling pathway | 1.40E-02 |
155 | GO:0009934: regulation of meristem structural organization | 1.52E-02 |
156 | GO:0080188: RNA-directed DNA methylation | 1.65E-02 |
157 | GO:0042254: ribosome biogenesis | 1.87E-02 |
158 | GO:0006364: rRNA processing | 1.91E-02 |
159 | GO:0005992: trehalose biosynthetic process | 1.92E-02 |
160 | GO:0019344: cysteine biosynthetic process | 1.92E-02 |
161 | GO:0009116: nucleoside metabolic process | 1.92E-02 |
162 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.92E-02 |
163 | GO:0006825: copper ion transport | 2.06E-02 |
164 | GO:0051302: regulation of cell division | 2.06E-02 |
165 | GO:0006306: DNA methylation | 2.20E-02 |
166 | GO:0048367: shoot system development | 2.33E-02 |
167 | GO:0048316: seed development | 2.33E-02 |
168 | GO:0006730: one-carbon metabolic process | 2.35E-02 |
169 | GO:0080167: response to karrikin | 2.39E-02 |
170 | GO:0001944: vasculature development | 2.50E-02 |
171 | GO:0071555: cell wall organization | 2.58E-02 |
172 | GO:0009553: embryo sac development | 2.64E-02 |
173 | GO:0010089: xylem development | 2.65E-02 |
174 | GO:0042127: regulation of cell proliferation | 2.65E-02 |
175 | GO:0009742: brassinosteroid mediated signaling pathway | 2.88E-02 |
176 | GO:0048653: anther development | 2.97E-02 |
177 | GO:0009733: response to auxin | 3.12E-02 |
178 | GO:0010305: leaf vascular tissue pattern formation | 3.13E-02 |
179 | GO:0006662: glycerol ether metabolic process | 3.13E-02 |
180 | GO:0048868: pollen tube development | 3.13E-02 |
181 | GO:0006342: chromatin silencing | 3.13E-02 |
182 | GO:0009741: response to brassinosteroid | 3.13E-02 |
183 | GO:0009958: positive gravitropism | 3.13E-02 |
184 | GO:0048544: recognition of pollen | 3.30E-02 |
185 | GO:0007059: chromosome segregation | 3.30E-02 |
186 | GO:0009646: response to absence of light | 3.30E-02 |
187 | GO:0019252: starch biosynthetic process | 3.47E-02 |
188 | GO:0008654: phospholipid biosynthetic process | 3.47E-02 |
189 | GO:0048825: cotyledon development | 3.47E-02 |
190 | GO:0009058: biosynthetic process | 3.58E-02 |
191 | GO:0002229: defense response to oomycetes | 3.64E-02 |
192 | GO:0010583: response to cyclopentenone | 3.81E-02 |
193 | GO:0042744: hydrogen peroxide catabolic process | 3.87E-02 |
194 | GO:0009567: double fertilization forming a zygote and endosperm | 4.17E-02 |
195 | GO:0007267: cell-cell signaling | 4.35E-02 |
196 | GO:0051607: defense response to virus | 4.54E-02 |
197 | GO:0055114: oxidation-reduction process | 4.61E-02 |
198 | GO:0007623: circadian rhythm | 4.68E-02 |
199 | GO:0001666: response to hypoxia | 4.72E-02 |
200 | GO:0009816: defense response to bacterium, incompatible interaction | 4.91E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
2 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
3 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
4 | GO:0015267: channel activity | 0.00E+00 |
5 | GO:0070009: serine-type aminopeptidase activity | 0.00E+00 |
6 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
7 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
8 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
9 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
10 | GO:0017150: tRNA dihydrouridine synthase activity | 2.05E-05 |
11 | GO:0004519: endonuclease activity | 3.41E-05 |
12 | GO:0001872: (1->3)-beta-D-glucan binding | 4.51E-05 |
13 | GO:0019843: rRNA binding | 2.43E-04 |
14 | GO:0004812: aminoacyl-tRNA ligase activity | 3.42E-04 |
15 | GO:0052381: tRNA dimethylallyltransferase activity | 3.60E-04 |
16 | GO:0004160: dihydroxy-acid dehydratase activity | 3.60E-04 |
17 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.60E-04 |
18 | GO:0004830: tryptophan-tRNA ligase activity | 3.60E-04 |
19 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 3.60E-04 |
20 | GO:0004813: alanine-tRNA ligase activity | 3.60E-04 |
21 | GO:0004008: copper-exporting ATPase activity | 3.60E-04 |
22 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.60E-04 |
23 | GO:0003723: RNA binding | 4.24E-04 |
24 | GO:0009672: auxin:proton symporter activity | 6.87E-04 |
25 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 7.83E-04 |
26 | GO:0019156: isoamylase activity | 7.83E-04 |
27 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.14E-03 |
28 | GO:0005262: calcium channel activity | 1.19E-03 |
29 | GO:0010329: auxin efflux transmembrane transporter activity | 1.19E-03 |
30 | GO:0070330: aromatase activity | 1.27E-03 |
31 | GO:0002161: aminoacyl-tRNA editing activity | 1.27E-03 |
32 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 1.27E-03 |
33 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.34E-03 |
34 | GO:0004222: metalloendopeptidase activity | 1.38E-03 |
35 | GO:0035197: siRNA binding | 1.83E-03 |
36 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.83E-03 |
37 | GO:0043023: ribosomal large subunit binding | 1.83E-03 |
38 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.83E-03 |
39 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.83E-03 |
40 | GO:0004176: ATP-dependent peptidase activity | 2.25E-03 |
41 | GO:0004185: serine-type carboxypeptidase activity | 2.27E-03 |
42 | GO:0005253: anion channel activity | 2.45E-03 |
43 | GO:0004930: G-protein coupled receptor activity | 2.45E-03 |
44 | GO:0042277: peptide binding | 2.45E-03 |
45 | GO:0008891: glycolate oxidase activity | 2.45E-03 |
46 | GO:0004659: prenyltransferase activity | 2.45E-03 |
47 | GO:0016279: protein-lysine N-methyltransferase activity | 2.45E-03 |
48 | GO:0004845: uracil phosphoribosyltransferase activity | 2.45E-03 |
49 | GO:0016836: hydro-lyase activity | 2.45E-03 |
50 | GO:0019199: transmembrane receptor protein kinase activity | 2.45E-03 |
51 | GO:0018685: alkane 1-monooxygenase activity | 3.14E-03 |
52 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 3.14E-03 |
53 | GO:0004888: transmembrane signaling receptor activity | 3.14E-03 |
54 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 3.14E-03 |
55 | GO:0005247: voltage-gated chloride channel activity | 3.88E-03 |
56 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.88E-03 |
57 | GO:0080030: methyl indole-3-acetate esterase activity | 3.88E-03 |
58 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.88E-03 |
59 | GO:0004332: fructose-bisphosphate aldolase activity | 3.88E-03 |
60 | GO:0004556: alpha-amylase activity | 3.88E-03 |
61 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.67E-03 |
62 | GO:0004124: cysteine synthase activity | 4.67E-03 |
63 | GO:0008195: phosphatidate phosphatase activity | 4.67E-03 |
64 | GO:0004849: uridine kinase activity | 4.67E-03 |
65 | GO:0008237: metallopeptidase activity | 5.86E-03 |
66 | GO:0016597: amino acid binding | 6.21E-03 |
67 | GO:0043022: ribosome binding | 6.41E-03 |
68 | GO:0008173: RNA methyltransferase activity | 7.36E-03 |
69 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 7.36E-03 |
70 | GO:0005375: copper ion transmembrane transporter activity | 7.36E-03 |
71 | GO:0030247: polysaccharide binding | 7.76E-03 |
72 | GO:0004805: trehalose-phosphatase activity | 1.05E-02 |
73 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.25E-02 |
74 | GO:0004521: endoribonuclease activity | 1.28E-02 |
75 | GO:0000049: tRNA binding | 1.28E-02 |
76 | GO:0031072: heat shock protein binding | 1.40E-02 |
77 | GO:0009982: pseudouridine synthase activity | 1.40E-02 |
78 | GO:0004565: beta-galactosidase activity | 1.40E-02 |
79 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.40E-02 |
80 | GO:0008168: methyltransferase activity | 1.74E-02 |
81 | GO:0005525: GTP binding | 1.81E-02 |
82 | GO:0004601: peroxidase activity | 1.83E-02 |
83 | GO:0031418: L-ascorbic acid binding | 1.92E-02 |
84 | GO:0050660: flavin adenine dinucleotide binding | 2.19E-02 |
85 | GO:0008408: 3'-5' exonuclease activity | 2.20E-02 |
86 | GO:0033612: receptor serine/threonine kinase binding | 2.20E-02 |
87 | GO:0004650: polygalacturonase activity | 2.48E-02 |
88 | GO:0003727: single-stranded RNA binding | 2.65E-02 |
89 | GO:0047134: protein-disulfide reductase activity | 2.81E-02 |
90 | GO:0008026: ATP-dependent helicase activity | 2.88E-02 |
91 | GO:0004527: exonuclease activity | 3.13E-02 |
92 | GO:0003735: structural constituent of ribosome | 3.27E-02 |
93 | GO:0004791: thioredoxin-disulfide reductase activity | 3.30E-02 |
94 | GO:0010181: FMN binding | 3.30E-02 |
95 | GO:0019901: protein kinase binding | 3.47E-02 |
96 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.64E-02 |
97 | GO:0003924: GTPase activity | 3.89E-02 |
98 | GO:0000156: phosphorelay response regulator activity | 3.99E-02 |
99 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.99E-02 |
100 | GO:0016791: phosphatase activity | 4.17E-02 |
101 | GO:0005524: ATP binding | 4.24E-02 |
102 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 4.35E-02 |
103 | GO:0008483: transaminase activity | 4.35E-02 |
104 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.35E-02 |