co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G62780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0035998: 7,8-dihydroneopterin 3'-triphosphate biosynthetic process	0.00E+00
5	GO:0005996: monosaccharide metabolic process	0.00E+00
6	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
7	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
8	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
9	GO:0015979: photosynthesis	6.50E-11
10	GO:0006000: fructose metabolic process	9.97E-09
11	GO:0006094: gluconeogenesis	3.61E-07
12	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.85E-06
13	GO:0006002: fructose 6-phosphate metabolic process	4.07E-06
14	GO:0032544: plastid translation	4.07E-06
15	GO:0009735: response to cytokinin	6.59E-06
16	GO:0005986: sucrose biosynthetic process	2.11E-05
17	GO:0009658: chloroplast organization	2.24E-05
18	GO:0015995: chlorophyll biosynthetic process	2.48E-05
19	GO:0009704: de-etiolation	1.62E-04
20	GO:0034337: RNA folding	1.98E-04
21	GO:0043953: protein transport by the Tat complex	1.98E-04
22	GO:0000476: maturation of 4.5S rRNA	1.98E-04
23	GO:0000967: rRNA 5'-end processing	1.98E-04
24	GO:0051775: response to redox state	1.98E-04
25	GO:0071277: cellular response to calcium ion	1.98E-04
26	GO:0065002: intracellular protein transmembrane transport	1.98E-04
27	GO:0043686: co-translational protein modification	1.98E-04
28	GO:0009773: photosynthetic electron transport in photosystem I	3.97E-04
29	GO:0008616: queuosine biosynthetic process	4.43E-04
30	GO:0006729: tetrahydrobiopterin biosynthetic process	4.43E-04
31	GO:0034470: ncRNA processing	4.43E-04
32	GO:0055114: oxidation-reduction process	4.56E-04
33	GO:0019253: reductive pentose-phosphate cycle	5.82E-04
34	GO:0010207: photosystem II assembly	5.82E-04
35	GO:0034599: cellular response to oxidative stress	5.87E-04
36	GO:0006518: peptide metabolic process	7.22E-04
37	GO:0006412: translation	7.45E-04
38	GO:0006020: inositol metabolic process	1.03E-03
39	GO:0071484: cellular response to light intensity	1.03E-03
40	GO:0009152: purine ribonucleotide biosynthetic process	1.03E-03
41	GO:0046653: tetrahydrofolate metabolic process	1.03E-03
42	GO:0006107: oxaloacetate metabolic process	1.03E-03
43	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.03E-03
44	GO:0033014: tetrapyrrole biosynthetic process	1.03E-03
45	GO:0010731: protein glutathionylation	1.03E-03
46	GO:1901332: negative regulation of lateral root development	1.03E-03
47	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.03E-03
48	GO:0019748: secondary metabolic process	1.05E-03
49	GO:0009765: photosynthesis, light harvesting	1.37E-03
50	GO:0006109: regulation of carbohydrate metabolic process	1.37E-03
51	GO:0045727: positive regulation of translation	1.37E-03
52	GO:0010600: regulation of auxin biosynthetic process	1.37E-03
53	GO:0006021: inositol biosynthetic process	1.37E-03
54	GO:0006734: NADH metabolic process	1.37E-03
55	GO:0010021: amylopectin biosynthetic process	1.37E-03
56	GO:0042631: cellular response to water deprivation	1.45E-03
57	GO:0006662: glycerol ether metabolic process	1.56E-03
58	GO:0031365: N-terminal protein amino acid modification	1.74E-03
59	GO:0019252: starch biosynthetic process	1.79E-03
60	GO:0046855: inositol phosphate dephosphorylation	2.14E-03
61	GO:0006796: phosphate-containing compound metabolic process	2.14E-03
62	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.57E-03
63	GO:1901259: chloroplast rRNA processing	2.57E-03
64	GO:0046654: tetrahydrofolate biosynthetic process	2.57E-03
65	GO:0009854: oxidative photosynthetic carbon pathway	2.57E-03
66	GO:0032259: methylation	2.65E-03
67	GO:0010027: thylakoid membrane organization	2.76E-03
68	GO:0010161: red light signaling pathway	3.03E-03
69	GO:0009772: photosynthetic electron transport in photosystem II	3.03E-03
70	GO:1900057: positive regulation of leaf senescence	3.03E-03
71	GO:0010928: regulation of auxin mediated signaling pathway	3.51E-03
72	GO:0009642: response to light intensity	3.51E-03
73	GO:0018298: protein-chromophore linkage	3.59E-03
74	GO:0071482: cellular response to light stimulus	4.02E-03
75	GO:0009657: plastid organization	4.02E-03
76	GO:0006526: arginine biosynthetic process	4.02E-03
77	GO:0009853: photorespiration	4.54E-03
78	GO:0010206: photosystem II repair	4.54E-03
79	GO:0090333: regulation of stomatal closure	4.54E-03
80	GO:0006783: heme biosynthetic process	4.54E-03
81	GO:0006754: ATP biosynthetic process	4.54E-03
82	GO:0006779: porphyrin-containing compound biosynthetic process	5.10E-03
83	GO:0006535: cysteine biosynthetic process from serine	5.67E-03
84	GO:0019684: photosynthesis, light reaction	6.27E-03
85	GO:0043085: positive regulation of catalytic activity	6.27E-03
86	GO:0000272: polysaccharide catabolic process	6.27E-03
87	GO:0009750: response to fructose	6.27E-03
88	GO:0018119: peptidyl-cysteine S-nitrosylation	6.27E-03
89	GO:0009636: response to toxic substance	6.57E-03
90	GO:0006790: sulfur compound metabolic process	6.89E-03
91	GO:0005983: starch catabolic process	6.89E-03
92	GO:0006108: malate metabolic process	7.52E-03
93	GO:0018107: peptidyl-threonine phosphorylation	7.52E-03
94	GO:0006364: rRNA processing	7.88E-03
95	GO:0009266: response to temperature stimulus	8.19E-03
96	GO:0005985: sucrose metabolic process	8.87E-03
97	GO:0046854: phosphatidylinositol phosphorylation	8.87E-03
98	GO:0019762: glucosinolate catabolic process	9.57E-03
99	GO:0006636: unsaturated fatty acid biosynthetic process	9.57E-03
100	GO:0045454: cell redox homeostasis	9.88E-03
101	GO:0019344: cysteine biosynthetic process	1.03E-02
102	GO:0000027: ribosomal large subunit assembly	1.03E-02
103	GO:0006396: RNA processing	1.16E-02
104	GO:0005975: carbohydrate metabolic process	1.16E-02
105	GO:0061077: chaperone-mediated protein folding	1.18E-02
106	GO:0010017: red or far-red light signaling pathway	1.26E-02
107	GO:0016226: iron-sulfur cluster assembly	1.26E-02
108	GO:0009561: megagametogenesis	1.42E-02
109	GO:0009306: protein secretion	1.42E-02
110	GO:0009058: biosynthetic process	1.49E-02
111	GO:0006606: protein import into nucleus	1.59E-02
112	GO:0006520: cellular amino acid metabolic process	1.67E-02
113	GO:0015986: ATP synthesis coupled proton transport	1.76E-02
114	GO:0006633: fatty acid biosynthetic process	1.77E-02
115	GO:0000302: response to reactive oxygen species	1.94E-02
116	GO:0042742: defense response to bacterium	1.96E-02
117	GO:0009567: double fertilization forming a zygote and endosperm	2.23E-02
118	GO:0010411: xyloglucan metabolic process	2.84E-02
119	GO:0016311: dephosphorylation	2.94E-02
120	GO:0009817: defense response to fungus, incompatible interaction	3.05E-02
121	GO:0042254: ribosome biogenesis	3.08E-02
122	GO:0010311: lateral root formation	3.16E-02
123	GO:0009407: toxin catabolic process	3.27E-02
124	GO:0007568: aging	3.38E-02
125	GO:0016051: carbohydrate biosynthetic process	3.61E-02
126	GO:0006099: tricarboxylic acid cycle	3.73E-02
127	GO:0030001: metal ion transport	3.96E-02
128	GO:0044550: secondary metabolite biosynthetic process	4.06E-02
129	GO:0010114: response to red light	4.32E-02
130	GO:0042546: cell wall biogenesis	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
2	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	0.00E+00
3	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
4	GO:0090711: FMN hydrolase activity	0.00E+00
5	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
6	GO:0003934: GTP cyclohydrolase I activity	0.00E+00
7	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
8	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
9	GO:0008465: glycerate dehydrogenase activity	0.00E+00
10	GO:0019843: rRNA binding	4.83E-09
11	GO:0018708: thiol S-methyltransferase activity	1.85E-06
12	GO:0016851: magnesium chelatase activity	1.57E-05
13	GO:0031072: heat shock protein binding	2.11E-05
14	GO:0043495: protein anchor	2.88E-05
15	GO:0019899: enzyme binding	1.26E-04
16	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.98E-04
17	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.98E-04
18	GO:0016776: phosphotransferase activity, phosphate group as acceptor	1.98E-04
19	GO:0004325: ferrochelatase activity	1.98E-04
20	GO:0042586: peptide deformylase activity	1.98E-04
21	GO:0008746: NAD(P)+ transhydrogenase activity	1.98E-04
22	GO:0010297: heteropolysaccharide binding	4.43E-04
23	GO:0009977: proton motive force dependent protein transmembrane transporter activity	4.43E-04
24	GO:0052832: inositol monophosphate 3-phosphatase activity	4.43E-04
25	GO:0033201: alpha-1,4-glucan synthase activity	4.43E-04
26	GO:0008479: queuine tRNA-ribosyltransferase activity	4.43E-04
27	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	4.43E-04
28	GO:0008934: inositol monophosphate 1-phosphatase activity	4.43E-04
29	GO:0052833: inositol monophosphate 4-phosphatase activity	4.43E-04
30	GO:0016630: protochlorophyllide reductase activity	4.43E-04
31	GO:0050017: L-3-cyanoalanine synthase activity	4.43E-04
32	GO:0042389: omega-3 fatty acid desaturase activity	4.43E-04
33	GO:0008266: poly(U) RNA binding	5.82E-04
34	GO:0004373: glycogen (starch) synthase activity	7.22E-04
35	GO:0004751: ribose-5-phosphate isomerase activity	7.22E-04
36	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	7.22E-04
37	GO:0008864: formyltetrahydrofolate deformylase activity	7.22E-04
38	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	7.22E-04
39	GO:0005528: FK506 binding	8.01E-04
40	GO:0043023: ribosomal large subunit binding	1.03E-03
41	GO:0008168: methyltransferase activity	1.07E-03
42	GO:0022891: substrate-specific transmembrane transporter activity	1.14E-03
43	GO:0047134: protein-disulfide reductase activity	1.34E-03
44	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.37E-03
45	GO:0009011: starch synthase activity	1.37E-03
46	GO:0004791: thioredoxin-disulfide reductase activity	1.67E-03
47	GO:0051082: unfolded protein binding	1.72E-03
48	GO:0003959: NADPH dehydrogenase activity	1.74E-03
49	GO:0003735: structural constituent of ribosome	1.89E-03
50	GO:0004332: fructose-bisphosphate aldolase activity	2.14E-03
51	GO:0004130: cytochrome-c peroxidase activity	2.14E-03
52	GO:0042578: phosphoric ester hydrolase activity	2.14E-03
53	GO:0016462: pyrophosphatase activity	2.14E-03
54	GO:0016615: malate dehydrogenase activity	2.14E-03
55	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.18E-03
56	GO:0004124: cysteine synthase activity	2.57E-03
57	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.57E-03
58	GO:0030060: L-malate dehydrogenase activity	2.57E-03
59	GO:0016491: oxidoreductase activity	2.68E-03
60	GO:0016168: chlorophyll binding	2.91E-03
61	GO:0004427: inorganic diphosphatase activity	3.03E-03
62	GO:0004033: aldo-keto reductase (NADP) activity	3.51E-03
63	GO:0004525: ribonuclease III activity	3.51E-03
64	GO:0004222: metalloendopeptidase activity	3.95E-03
65	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.02E-03
66	GO:0071949: FAD binding	4.54E-03
67	GO:0042802: identical protein binding	4.65E-03
68	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.10E-03
69	GO:0004364: glutathione transferase activity	5.62E-03
70	GO:0030234: enzyme regulator activity	5.67E-03
71	GO:0008047: enzyme activator activity	5.67E-03
72	GO:0004185: serine-type carboxypeptidase activity	5.85E-03
73	GO:0043621: protein self-association	6.33E-03
74	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.82E-03
75	GO:0051287: NAD binding	7.08E-03
76	GO:0004565: beta-galactosidase activity	7.52E-03
77	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	9.63E-03
78	GO:0004857: enzyme inhibitor activity	1.03E-02
79	GO:0051536: iron-sulfur cluster binding	1.03E-02
80	GO:0015035: protein disulfide oxidoreductase activity	1.16E-02
81	GO:0009055: electron carrier activity	1.41E-02
82	GO:0003727: single-stranded RNA binding	1.42E-02
83	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.67E-02
84	GO:0008565: protein transporter activity	1.69E-02
85	GO:0050662: coenzyme binding	1.76E-02
86	GO:0048038: quinone binding	1.94E-02
87	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.94E-02
88	GO:0016787: hydrolase activity	2.10E-02
89	GO:0016887: ATPase activity	2.24E-02
90	GO:0004721: phosphoprotein phosphatase activity	2.84E-02
91	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.84E-02
92	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.94E-02
93	GO:0004601: peroxidase activity	3.02E-02
94	GO:0046872: metal ion binding	3.38E-02
95	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.38E-02
96	GO:0003746: translation elongation factor activity	3.61E-02
97	GO:0005507: copper ion binding	4.12E-02
98	GO:0005198: structural molecule activity	4.70E-02